RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 DRC7Q8IY82 874 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 ZNF700Q9H0M5 742 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 INTUQ9ULD6 942 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 FRMD4BQ9Y2L6 1034 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 ALDH1L1O75891 902 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 GNA15P30679 374 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 PRSS12P56730 875 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 KCTD2Q14681 263 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 ERICH6BQ5W0A0 696 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 TYW1BQ6NUM6 668 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
ECHDC1-222ENST00000531967 PER1O15534 1290 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 ZBTB24O43167 697 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 SSBP05455 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 EPHB1P54762 984 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 FKBP5Q13451 457 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 TMEM95Q3KNT9 176 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 ANKS3Q6ZW76 656 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 HLA-CQ95604 372 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 ZBTB7BO15156 539 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 GPR182O15218 404 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 PTCD1O75127 700 aaKnown RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 VDRP11473 427 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 LRRC41Q15345 812 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 TTF1Q15361 905 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 REM2Q8IYK8 340 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 PHTF2Q8N3S3 785 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 CEP126Q9P2H0 1117 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 ATP8A1Q9Y2Q0 1164 aa6.61□□□□□ -1.35
ECHDC1-222ENST00000531967 MZF1P28698 734 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 INO80DQ53TQ3 878 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 CDC5LQ99459 802 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 FEZ1Q99689 392 aa6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 RSPH9Q9H1X1 276 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 PAK3O75914 559 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 RAB33AQ14088 237 aa6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 LILRB2Q8N423 598 aa6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 TPCN2Q8NHX9 752 aa6.6□□□□□ -1.35
ECHDC1-222ENST00000531967 SFI1A8K8P3 1242 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 TCERG1O14776 1098 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 KLF4O43474 513 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 MPSTP25325 297 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 NFX1Q12986 1120 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 HLTFQ14527 1009 aaKnown RBP eCLIP6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 NAA30Q147X3 362 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 ALG1LQ6GMV1 187 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 KRT26Q7Z3Y9 468 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 LRP10Q7Z4F1 713 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 CHPFQ8IZ52 775 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 PURBQ96QR8 312 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 PPCSQ9HAB8 311 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 AS3MTQ9HBK9 375 aa6.59□□□□□ -1.35
ECHDC1-222ENST00000531967 CCDC85CA6NKD9 419 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 ATF3P18847 181 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 POLD1P28340 1107 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 TRAPPC10P48553 1259 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 CCDC96Q2M329 555 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 C14orf80Q86SX3 495 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 RDH13Q8NBN7 331 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 IPO4Q8TEX9 1081 aaKnown RBP6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 CCDC87Q9NVE4 849 aa6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 RBM19Q9Y4C8 960 aaKnown RBP6.59□□□□□ -1.36
ECHDC1-222ENST00000531967 SCGB1D2O95969 90 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 CTHP32929 405 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 SLC4A3P48751 1232 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 TRAF7Q6Q0C0 670 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 C16orf86Q6ZW13 317 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 TRPM4Q8TD43 1214 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 RASGRP4Q8TDF6 673 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 ALKBH8Q96BT7 664 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 FAM129BQ96TA1 746 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 EYA1Q99502 592 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 FAM126AQ9BYI3 521 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 CHIC2Q9UKJ5 165 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 AK5Q9Y6K8 562 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 PNMA6FA0A0J9YX94 578 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 A6NJY4 79 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 WEE1P30291 646 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 ETFBP38117 255 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 SIM2Q14190 667 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 MAP7D1Q3KQU3 841 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 TKFCQ3LXA3 575 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 CCDC102BQ68D86 513 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 IFNL3Q8IZI9 196 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 MYRIPQ8NFW9 859 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 HINFPQ9BQA5 517 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 TMEM260Q9NX78 707 aa6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 MRPS23Q9Y3D9 190 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-222ENST00000531967 C6orf229H3BNL8 230 aa6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 DHX16O60231 1041 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 GRAMD1BQ3KR37 738 aa6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 TEX19Q8NA77 164 aa6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 E2F7Q96AV8 911 aa6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 SEC16BQ96JE7 1060 aa6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 DNAJC7Q99615 494 aa6.57□□□□□ -1.36
ECHDC1-222ENST00000531967 SHTN1A0MZ66 631 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms