RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 DZIP3Q86Y13 1208 aaKnown RBP23.25■■□□□ 1.31
PKP3-208ENST00000531857 RSPH6AQ9H0K4 717 aa23.25■■□□□ 1.31
PKP3-208ENST00000531857 SRGNP10124 158 aa23.24■■□□□ 1.31
PKP3-208ENST00000531857 NPM2Q86SE8 214 aaKnown RBP23.24■■□□□ 1.31
PKP3-208ENST00000531857 LTBP3Q9NS15 1303 aa23.24■■□□□ 1.31
PKP3-208ENST00000531857 NPHP1O15259 732 aa23.23■■□□□ 1.31
PKP3-208ENST00000531857 STYK1Q6J9G0 422 aa23.23■■□□□ 1.31
PKP3-208ENST00000531857 PRPF40BQ6NWY9 871 aaKnown RBP23.23■■□□□ 1.31
PKP3-208ENST00000531857 CNKSR1Q969H4 720 aa23.23■■□□□ 1.31
PKP3-208ENST00000531857 TAOK3Q9H2K8 898 aa23.23■■□□□ 1.31
PKP3-208ENST00000531857 ST5P78524 1137 aa23.22■■□□□ 1.31
PKP3-208ENST00000531857 DDNO94850 711 aaPredicted RBP23.2■■□□□ 1.3
PKP3-208ENST00000531857 MCM10Q7L590 875 aa23.2■■□□□ 1.3
PKP3-208ENST00000531857 MASTLQ96GX5 879 aa23.2■■□□□ 1.3
PKP3-208ENST00000531857 POTEIP0CG38 1075 aa23.19■■□□□ 1.3
PKP3-208ENST00000531857 POTEJP0CG39 1038 aa23.19■■□□□ 1.3
PKP3-208ENST00000531857 CFAP53Q96M91 514 aa23.19■■□□□ 1.3
PKP3-208ENST00000531857 SCN4AP35499 1836 aa23.19■■□□□ 1.3
PKP3-208ENST00000531857 HSPA1AP0DMV8 641 aaKnown RBP23.18■■□□□ 1.3
PKP3-208ENST00000531857 HSPA1BP0DMV9 641 aaKnown RBP23.18■■□□□ 1.3
PKP3-208ENST00000531857 NBPF5PQ86XG9 351 aaPredicted RBP23.18■■□□□ 1.3
PKP3-208ENST00000531857 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
PKP3-208ENST00000531857 CAPN15O75808 1086 aa23.17■■□□□ 1.3
PKP3-208ENST00000531857 SNRPA1P09661 255 aaKnown RBP23.17■■□□□ 1.3
PKP3-208ENST00000531857 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
PKP3-208ENST00000531857 TNS4Q8IZW8 715 aa23.17■■□□□ 1.3
PKP3-208ENST00000531857 C7orf43Q8WVR3 580 aa23.17■■□□□ 1.3
PKP3-208ENST00000531857 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
PKP3-208ENST00000531857 DCTN1Q14203 1278 aa23.16■■□□□ 1.3
PKP3-208ENST00000531857 CHADLQ6NUI6 762 aa23.16■■□□□ 1.3
PKP3-208ENST00000531857 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
PKP3-208ENST00000531857 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
PKP3-208ENST00000531857 LAMB4A4D0S4 1761 aa23.16■■□□□ 1.3
PKP3-208ENST00000531857 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
PKP3-208ENST00000531857 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
PKP3-208ENST00000531857 SOGA3Q5TF21 947 aa23.15■■□□□ 1.3
PKP3-208ENST00000531857 RTF1Q92541 710 aaKnown RBP23.14■■□□□ 1.29
PKP3-208ENST00000531857 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
PKP3-208ENST00000531857 NUP98P52948 1817 aa23.14■■□□□ 1.29
PKP3-208ENST00000531857 PPP2R1AP30153 589 aa23.13■■□□□ 1.29
PKP3-208ENST00000531857 OLFM4Q6UX06 510 aa23.13■■□□□ 1.29
PKP3-208ENST00000531857 NIP7Q9Y221 180 aaKnown RBP eCLIP23.13■■□□□ 1.29
PKP3-208ENST00000531857 ZNF652Q9Y2D9 606 aa23.13■■□□□ 1.29
PKP3-208ENST00000531857 KLRG2A4D1S0 409 aaPredicted RBP23.12■■□□□ 1.29
PKP3-208ENST00000531857 FAM177BA6PVY3 158 aa23.12■■□□□ 1.29
PKP3-208ENST00000531857 NPR1P16066 1061 aa23.12■■□□□ 1.29
PKP3-208ENST00000531857 CCDC93Q567U6 631 aa23.12■■□□□ 1.29
PKP3-208ENST00000531857 CREBZFQ9NS37 354 aa23.12■■□□□ 1.29
PKP3-208ENST00000531857 TPTE2Q6XPS3 522 aa23.11■■□□□ 1.29
PKP3-208ENST00000531857 MKRN1Q9UHC7 482 aaKnown RBP23.11■■□□□ 1.29
PKP3-208ENST00000531857 KDM3BQ7LBC6 1761 aa23.11■■□□□ 1.29
PKP3-208ENST00000531857 HLFQ16534 295 aa23.1■■□□□ 1.29
PKP3-208ENST00000531857 L3MBTL3Q96JM7 780 aaPredicted RBP23.1■■□□□ 1.29
PKP3-208ENST00000531857 ZNF277Q9NRM2 450 aaPredicted RBP23.1■■□□□ 1.29
PKP3-208ENST00000531857 MIS18AQ9NYP9 233 aa23.1■■□□□ 1.29
PKP3-208ENST00000531857 ZNF541Q9H0D2 1346 aa23.09■■□□□ 1.29
PKP3-208ENST00000531857 FKBP4Q02790 459 aaKnown RBP eCLIP23.09■■□□□ 1.29
PKP3-208ENST00000531857 TAF1DQ9H5J8 278 aaPredicted RBP23.09■■□□□ 1.29
PKP3-208ENST00000531857 IQCA1LA6NCM1 817 aa23.08■■□□□ 1.29
PKP3-208ENST00000531857 ADAMTSL1Q8N6G6 1762 aa23.08■■□□□ 1.29
PKP3-208ENST00000531857 PASKQ96RG2 1323 aa23.08■■□□□ 1.28
PKP3-208ENST00000531857 HTATSF1O43719 755 aaKnown RBP23.07■■□□□ 1.28
PKP3-208ENST00000531857 TAF7Q15545 349 aaPredicted RBP23.07■■□□□ 1.28
PKP3-208ENST00000531857 LDHDQ86WU2 507 aa23.07■■□□□ 1.28
PKP3-208ENST00000531857 RGL2O15211 777 aa23.06■■□□□ 1.28
PKP3-208ENST00000531857 RTKN2Q8IZC4 609 aa23.04■■□□□ 1.28
PKP3-208ENST00000531857 NGEFQ8N5V2 710 aa23.04■■□□□ 1.28
PKP3-208ENST00000531857 CNTNAP1P78357 1384 aa23.03■■□□□ 1.28
PKP3-208ENST00000531857 SNED1Q8TER0 1413 aa23.03■■□□□ 1.28
PKP3-208ENST00000531857 ITGBL1O95965 494 aaPredicted RBP23.03■■□□□ 1.28
PKP3-208ENST00000531857 EAPPQ56P03 285 aaPredicted RBP23.03■■□□□ 1.28
PKP3-208ENST00000531857 SYNE4Q8N205 404 aa23.03■■□□□ 1.28
PKP3-208ENST00000531857 ABCC12Q96J65 1359 aa23.02■■□□□ 1.28
PKP3-208ENST00000531857 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
PKP3-208ENST00000531857 ALDH1B1P30837 517 aa23.02■■□□□ 1.28
PKP3-208ENST00000531857 IARSP41252 1262 aaKnown RBP23.02■■□□□ 1.28
PKP3-208ENST00000531857 NUTM1Q86Y26 1132 aa23.02■■□□□ 1.28
PKP3-208ENST00000531857 COL4A5P29400 1685 aa23.01■■□□□ 1.27
PKP3-208ENST00000531857 FZD9O00144 591 aa23.01■■□□□ 1.27
PKP3-208ENST00000531857 HACL1Q9UJ83 578 aa23.01■■□□□ 1.27
PKP3-208ENST00000531857 RNF123Q5XPI4 1314 aa23.01■■□□□ 1.27
PKP3-208ENST00000531857 EPHX2P34913 555 aa23■■□□□ 1.27
PKP3-208ENST00000531857 CRY2Q49AN0 593 aa23■■□□□ 1.27
PKP3-208ENST00000531857 CLEC11AQ9Y240 323 aa23■■□□□ 1.27
PKP3-208ENST00000531857 TMEM88BA6NKF7 163 aa22.99■■□□□ 1.27
PKP3-208ENST00000531857 FOXN1O15353 648 aa22.99■■□□□ 1.27
PKP3-208ENST00000531857 TTLL7Q6ZT98 887 aa22.99■■□□□ 1.27
PKP3-208ENST00000531857 LTBP1Q14766 1721 aa22.99■■□□□ 1.27
PKP3-208ENST00000531857 ERVV-1B6SEH8 477 aa22.98■■□□□ 1.27
PKP3-208ENST00000531857 VEGFBP49765 207 aa22.98■■□□□ 1.27
PKP3-208ENST00000531857 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
PKP3-208ENST00000531857 MAP3K15Q6ZN16 1313 aa22.98■■□□□ 1.27
PKP3-208ENST00000531857 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
PKP3-208ENST00000531857 SLC51AQ86UW1 340 aa22.97■■□□□ 1.27
PKP3-208ENST00000531857 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
PKP3-208ENST00000531857 NYXQ9GZU5 481 aa22.97■■□□□ 1.27
PKP3-208ENST00000531857 UBN2Q6ZU65 1347 aa22.97■■□□□ 1.27
PKP3-208ENST00000531857 MYL6BP14649 208 aa22.96■■□□□ 1.27
PKP3-208ENST00000531857 GPTP24298 496 aa22.96■■□□□ 1.27
PKP3-208ENST00000531857 MAP1SQ66K74 1059 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms