RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 U2AF1Q01081 240 aaKnown RBP eCLIP28.13■■■□□ 2.09
FDFT1-220ENST00000531733 DICER1Q9UPY3 1922 aaKnown RBP28.12■■■□□ 2.09
FDFT1-220ENST00000531733 PDZRN3Q9UPQ7 1066 aa28.11■■■□□ 2.09
FDFT1-220ENST00000531733 SRGNP10124 158 aa28.1■■■□□ 2.09
FDFT1-220ENST00000531733 NBPF26B4DH59 902 aa28.09■■■□□ 2.09
FDFT1-220ENST00000531733 ERFEQ4G0M1 354 aa28.09■■■□□ 2.09
FDFT1-220ENST00000531733 PRPF40BQ6NWY9 871 aaKnown RBP28.09■■■□□ 2.09
FDFT1-220ENST00000531733 NBPF10Q6P3W6 841 aaKnown RBP28.09■■■□□ 2.09
FDFT1-220ENST00000531733 NPM2Q86SE8 214 aaKnown RBP28.09■■■□□ 2.09
FDFT1-220ENST00000531733 NBPF15Q8N660 670 aa28.09■■■□□ 2.09
FDFT1-220ENST00000531733 NUDCQ9Y266 331 aa28.09■■■□□ 2.09
FDFT1-220ENST00000531733 ST5P78524 1137 aa28.08■■■□□ 2.09
FDFT1-220ENST00000531733 ARFGEF2Q9Y6D5 1785 aa28.07■■■□□ 2.08
FDFT1-220ENST00000531733 NPHP1O15259 732 aa28.07■■■□□ 2.08
FDFT1-220ENST00000531733 SNRPA1P09661 255 aaKnown RBP28.07■■■□□ 2.08
FDFT1-220ENST00000531733 STYK1Q6J9G0 422 aa28.07■■■□□ 2.08
FDFT1-220ENST00000531733 RTF1Q92541 710 aaKnown RBP28.07■■■□□ 2.08
FDFT1-220ENST00000531733 CNKSR1Q969H4 720 aa28.06■■■□□ 2.08
FDFT1-220ENST00000531733 TAOK3Q9H2K8 898 aa28.06■■■□□ 2.08
FDFT1-220ENST00000531733 LTBP3Q9NS15 1303 aa28.06■■■□□ 2.08
FDFT1-220ENST00000531733 MASTLQ96GX5 879 aa28.05■■■□□ 2.08
FDFT1-220ENST00000531733 MIS18AQ9NYP9 233 aa28.05■■■□□ 2.08
FDFT1-220ENST00000531733 COL13A1Q5TAT6 717 aaPredicted RBP28.04■■■□□ 2.08
FDFT1-220ENST00000531733 DPY19L2Q6NUT2 758 aa28.04■■■□□ 2.08
FDFT1-220ENST00000531733 NBPF5PQ86XG9 351 aaPredicted RBP28.04■■■□□ 2.08
FDFT1-220ENST00000531733 CLEC4GQ6UXB4 293 aa28.03■■■□□ 2.08
FDFT1-220ENST00000531733 C7orf43Q8WVR3 580 aa28.03■■■□□ 2.08
FDFT1-220ENST00000531733 DDNO94850 711 aaPredicted RBP28.02■■■□□ 2.08
FDFT1-220ENST00000531733 POTEIP0CG38 1075 aa28.02■■■□□ 2.08
FDFT1-220ENST00000531733 POTEJP0CG39 1038 aa28.02■■■□□ 2.08
FDFT1-220ENST00000531733 HLFQ16534 295 aa28.01■■■□□ 2.07
FDFT1-220ENST00000531733 OLFM4Q6UX06 510 aa28.01■■■□□ 2.07
FDFT1-220ENST00000531733 FAM177BA6PVY3 158 aa28■■■□□ 2.07
FDFT1-220ENST00000531733 NIP7Q9Y221 180 aaKnown RBP eCLIP28■■■□□ 2.07
FDFT1-220ENST00000531733 HTATSF1O43719 755 aaKnown RBP27.99■■■□□ 2.07
FDFT1-220ENST00000531733 ZNF652Q9Y2D9 606 aa27.99■■■□□ 2.07
FDFT1-220ENST00000531733 KLRG2A4D1S0 409 aaPredicted RBP27.98■■■□□ 2.07
FDFT1-220ENST00000531733 TAF7Q15545 349 aaPredicted RBP27.98■■■□□ 2.07
FDFT1-220ENST00000531733 DLG5Q8TDM6 1919 aa27.98■■■□□ 2.07
FDFT1-220ENST00000531733 LAMB4A4D0S4 1761 aa27.96■■■□□ 2.07
FDFT1-220ENST00000531733 NPR1P16066 1061 aa27.96■■■□□ 2.07
FDFT1-220ENST00000531733 SOGA3Q5TF21 947 aa27.95■■■□□ 2.06
FDFT1-220ENST00000531733 KDM3BQ7LBC6 1761 aa27.95■■■□□ 2.06
FDFT1-220ENST00000531733 CCDC93Q567U6 631 aa27.94■■■□□ 2.06
FDFT1-220ENST00000531733 TPTE2Q6XPS3 522 aa27.94■■■□□ 2.06
FDFT1-220ENST00000531733 CHADLQ6NUI6 762 aa27.93■■■□□ 2.06
FDFT1-220ENST00000531733 NGEFQ8N5V2 710 aa27.93■■■□□ 2.06
FDFT1-220ENST00000531733 THUMPD2Q9BTF0 503 aaKnown RBP27.93■■■□□ 2.06
FDFT1-220ENST00000531733 ZNF277Q9NRM2 450 aaPredicted RBP27.93■■■□□ 2.06
FDFT1-220ENST00000531733 PLEKHF1Q96S99 279 aa27.92■■■□□ 2.06
FDFT1-220ENST00000531733 ZNF541Q9H0D2 1346 aa27.92■■■□□ 2.06
FDFT1-220ENST00000531733 ABCC12Q96J65 1359 aa27.91■■■□□ 2.06
FDFT1-220ENST00000531733 RGL2O15211 777 aa27.91■■■□□ 2.06
FDFT1-220ENST00000531733 FKBP4Q02790 459 aaKnown RBP eCLIP27.91■■■□□ 2.06
FDFT1-220ENST00000531733 HSPA1AP0DMV8 641 aaKnown RBP27.9■■■□□ 2.06
FDFT1-220ENST00000531733 HSPA1BP0DMV9 641 aaKnown RBP27.9■■■□□ 2.06
FDFT1-220ENST00000531733 TTLL7Q6ZT98 887 aa27.89■■■□□ 2.06
FDFT1-220ENST00000531733 NUTM1Q86Y26 1132 aa27.89■■■□□ 2.06
FDFT1-220ENST00000531733 NUP98P52948 1817 aa27.89■■■□□ 2.06
FDFT1-220ENST00000531733 EIF4A1P60842 406 aaKnown RBP27.88■■■□□ 2.05
FDFT1-220ENST00000531733 SLC51AQ86UW1 340 aa27.88■■■□□ 2.05
FDFT1-220ENST00000531733 L3MBTL3Q96JM7 780 aaPredicted RBP27.88■■■□□ 2.05
FDFT1-220ENST00000531733 SNED1Q8TER0 1413 aa27.87■■■□□ 2.05
FDFT1-220ENST00000531733 TAF1DQ9H5J8 278 aaPredicted RBP27.87■■■□□ 2.05
FDFT1-220ENST00000531733 RRP7AQ9Y3A4 280 aaKnown RBP27.87■■■□□ 2.05
FDFT1-220ENST00000531733 SCN4AP35499 1836 aa27.86■■■□□ 2.05
FDFT1-220ENST00000531733 MKRN1Q9UHC7 482 aaKnown RBP27.86■■■□□ 2.05
FDFT1-220ENST00000531733 NFE2L2Q16236 605 aa27.85■■■□□ 2.05
FDFT1-220ENST00000531733 CREBZFQ9NS37 354 aa27.85■■■□□ 2.05
FDFT1-220ENST00000531733 MAP3K15Q6ZN16 1313 aa27.85■■■□□ 2.05
FDFT1-220ENST00000531733 MYL6BP14649 208 aa27.84■■■□□ 2.05
FDFT1-220ENST00000531733 GTF2E1P29083 439 aaPredicted RBP27.84■■■□□ 2.05
FDFT1-220ENST00000531733 CRY2Q49AN0 593 aa27.84■■■□□ 2.05
FDFT1-220ENST00000531733 SYNE4Q8N205 404 aa27.84■■■□□ 2.05
FDFT1-220ENST00000531733 UBN2Q6ZU65 1347 aa27.84■■■□□ 2.05
FDFT1-220ENST00000531733 PASKQ96RG2 1323 aa27.84■■■□□ 2.05
FDFT1-220ENST00000531733 IQCA1LA6NCM1 817 aa27.83■■■□□ 2.05
FDFT1-220ENST00000531733 ERVV-1B6SEH8 477 aa27.83■■■□□ 2.05
FDFT1-220ENST00000531733 GPTP24298 496 aa27.83■■■□□ 2.05
FDFT1-220ENST00000531733 RTKN2Q8IZC4 609 aa27.83■■■□□ 2.05
FDFT1-220ENST00000531733 PNISRQ8TF01 805 aaKnown RBP27.83■■■□□ 2.05
FDFT1-220ENST00000531733 ZBTB3Q9H5J0 574 aa27.83■■■□□ 2.05
FDFT1-220ENST00000531733 COL4A5P29400 1685 aa27.83■■■□□ 2.05
FDFT1-220ENST00000531733 CAPN15O75808 1086 aa27.82■■■□□ 2.04
FDFT1-220ENST00000531733 LDHDQ86WU2 507 aa27.82■■■□□ 2.04
FDFT1-220ENST00000531733 TNS4Q8IZW8 715 aa27.82■■■□□ 2.04
FDFT1-220ENST00000531733 ALDH1B1P30837 517 aa27.81■■■□□ 2.04
FDFT1-220ENST00000531733 IARSP41252 1262 aaKnown RBP27.81■■■□□ 2.04
FDFT1-220ENST00000531733 ADAMTSL1Q8N6G6 1762 aa27.81■■■□□ 2.04
FDFT1-220ENST00000531733 FZD9O00144 591 aa27.8■■■□□ 2.04
FDFT1-220ENST00000531733 NEFMP07197 916 aa27.8■■■□□ 2.04
FDFT1-220ENST00000531733 EAPPQ56P03 285 aaPredicted RBP27.8■■■□□ 2.04
FDFT1-220ENST00000531733 SUSD4Q5VX71 490 aa27.8■■■□□ 2.04
FDFT1-220ENST00000531733 NYXQ9GZU5 481 aa27.8■■■□□ 2.04
FDFT1-220ENST00000531733 RNF123Q5XPI4 1314 aa27.79■■■□□ 2.04
FDFT1-220ENST00000531733 ITGBL1O95965 494 aaPredicted RBP27.79■■■□□ 2.04
FDFT1-220ENST00000531733 C3orf67Q6ZVT6 689 aa27.79■■■□□ 2.04
FDFT1-220ENST00000531733 KIF6Q6ZMV9 814 aa27.78■■■□□ 2.04
FDFT1-220ENST00000531733 HACL1Q9UJ83 578 aa27.78■■■□□ 2.04
FDFT1-220ENST00000531733 ZNF34Q8IZ26 560 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms