RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 DIAPH1O60610 1272 aaKnown RBP7.33□□□□□ -1.24
CHD7-210ENST00000531695 KDM4AO75164 1064 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 TRIM27P14373 513 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
CHD7-210ENST00000531695 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
CHD7-210ENST00000531695 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
CHD7-210ENST00000531695 EXOSC9Q06265 439 aaKnown RBP7.33□□□□□ -1.24
CHD7-210ENST00000531695 ATF7IPQ6VMQ6 1270 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 SSH1Q8WYL5 1049 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 FRAT1Q92837 279 aaPredicted RBP7.33□□□□□ -1.24
CHD7-210ENST00000531695 CDK19Q9BWU1 502 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 RSPH6AQ9H0K4 717 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 ANTXR1Q9H6X2 564 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 NCOA3Q9Y6Q9 1424 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
CHD7-210ENST00000531695 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
CHD7-210ENST00000531695 KIF13AQ9H1H9 1805 aa7.32□□□□□ -1.24
CHD7-210ENST00000531695 NEUROD2Q15784 382 aa7.32□□□□□ -1.24
CHD7-210ENST00000531695 ARHGAP45Q92619 1136 aa7.32□□□□□ -1.24
CHD7-210ENST00000531695 USB1Q9BQ65 265 aaKnown RBP7.32□□□□□ -1.24
CHD7-210ENST00000531695 TSPOAP1O95153 1857 aa7.32□□□□□ -1.24
CHD7-210ENST00000531695 N4BP2Q86UW6 1770 aaPredicted RBP7.31□□□□□ -1.24
CHD7-210ENST00000531695 IPO8O15397 1037 aaKnown RBP7.31□□□□□ -1.24
CHD7-210ENST00000531695 ST8SIA5O15466 376 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 ZNF853P0CG23 659 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 FOXC1Q12948 553 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 TSR2Q969E8 191 aaKnown RBP7.31□□□□□ -1.24
CHD7-210ENST00000531695 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 ZBTB40Q9NUA8 1239 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 POGKQ9P215 609 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 POLKQ9UBT6 870 aa7.31□□□□□ -1.24
CHD7-210ENST00000531695 FMN2Q9NZ56 1722 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 HOXA2O43364 376 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 RIPK4P57078 832 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 CALD1Q05682 793 aaKnown RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 NFE2L2Q16236 605 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 FBXO31Q5XUX0 539 aaPredicted RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 FTSJ3Q8IY81 847 aaKnown RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 BCL2L13Q9BXK5 485 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 CHMP4BQ9H444 224 aaKnown RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 UPF2Q9HAU5 1272 aaKnown RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 FAM217BQ9NTX9 383 aaPredicted RBP7.3□□□□□ -1.24
CHD7-210ENST00000531695 IFT57Q9NWB7 429 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 STK26Q9P289 416 aa7.3□□□□□ -1.24
CHD7-210ENST00000531695 ABCC4O15439 1325 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 U2SURPO15042 1029 aaKnown RBP7.29□□□□□ -1.24
CHD7-210ENST00000531695 ZBTB24O43167 697 aaPredicted RBP7.29□□□□□ -1.24
CHD7-210ENST00000531695 FRAT2O75474 233 aaPredicted RBP7.29□□□□□ -1.24
CHD7-210ENST00000531695 IL13P35225 146 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 TRIM32Q13049 653 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 CYP4X1Q8N118 509 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 TMEM57Q8N5G2 664 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHD7-210ENST00000531695 CCDC102AQ96A19 550 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 TBC1D2Q9BYX2 928 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 CABP1Q9NZU7 370 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 NOB1Q9ULX3 412 aaKnown RBP7.29□□□□□ -1.24
CHD7-210ENST00000531695 PEAK1Q9H792 1746 aa7.29□□□□□ -1.24
CHD7-210ENST00000531695 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.29□□□□□ -1.24
CHD7-210ENST00000531695 OVOS2A0A0J9YW53 1432 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 OVOS2Q6IE36 1432 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 LRRC37A3O60309 1634 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 WASLO00401 505 aaPredicted RBP7.28□□□□□ -1.24
CHD7-210ENST00000531695 VAMP4O75379 141 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 SMPD1P17405 629 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 RBM25P49756 843 aaKnown RBP7.28□□□□□ -1.24
CHD7-210ENST00000531695 MDM2Q00987 491 aaPredicted RBP7.28□□□□□ -1.24
CHD7-210ENST00000531695 NUCB1Q02818 461 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 TREML4Q6UXN2 200 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 SNIP1Q8TAD8 396 aaKnown RBP7.28□□□□□ -1.24
CHD7-210ENST00000531695 GPCPD1Q9NPB8 672 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 DACH1Q9UI36 760 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 CACNA1FO60840 1977 aa7.28□□□□□ -1.24
CHD7-210ENST00000531695 ADAMTS13Q76LX8 1427 aa7.27□□□□□ -1.24
CHD7-210ENST00000531695 TUBGCP6Q96RT7 1819 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 PRKAR2BP31323 418 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 CLCN1P35523 988 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 GNAI1P63096 354 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 LMOD3Q0VAK6 560 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 SAFB2Q14151 953 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHD7-210ENST00000531695 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.27□□□□□ -1.25
CHD7-210ENST00000531695 SNX21Q969T3 373 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 GCC1Q96CN9 775 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 METP08581 1390 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 SSH2Q76I76 1423 aa7.27□□□□□ -1.25
CHD7-210ENST00000531695 USP31Q70CQ4 1352 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 TULP1O00294 542 aaPredicted RBP7.26□□□□□ -1.25
CHD7-210ENST00000531695 ZBTB7BO15156 539 aaPredicted RBP7.26□□□□□ -1.25
CHD7-210ENST00000531695 AXIN1O15169 862 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 DDIT3P35638 169 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 WNT7BP56706 349 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 BMP2KLQ5H9B9 411 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 ITPRIPQ8IWB1 547 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 HLA-CQ95604 372 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 C22orf23Q9BZE7 217 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 RGS12O14924 1447 aa7.26□□□□□ -1.25
CHD7-210ENST00000531695 DIP2AQ14689 1571 aa7.25□□□□□ -1.25
CHD7-210ENST00000531695 KIAA0232Q92628 1395 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms