RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 RSPH6AQ9H0K4 717 aa25.51■■□□□ 1.67
UBXN1-212ENST00000531625 NPHP1O15259 732 aa25.5■■□□□ 1.67
UBXN1-212ENST00000531625 PRKAR2BP31323 418 aa25.5■■□□□ 1.67
UBXN1-212ENST00000531625 CLEC4GQ6UXB4 293 aa25.5■■□□□ 1.67
UBXN1-212ENST00000531625 SLX4Q8IY92 1834 aa25.49■■□□□ 1.67
UBXN1-212ENST00000531625 CNGB1Q14028 1251 aaPredicted RBP25.49■■□□□ 1.67
UBXN1-212ENST00000531625 PRPF40BQ6NWY9 871 aaKnown RBP25.49■■□□□ 1.67
UBXN1-212ENST00000531625 MASTLQ96GX5 879 aa25.49■■□□□ 1.67
UBXN1-212ENST00000531625 CFAP53Q96M91 514 aa25.49■■□□□ 1.67
UBXN1-212ENST00000531625 USP16Q9Y5T5 823 aa25.49■■□□□ 1.67
UBXN1-212ENST00000531625 BCORQ6W2J9 1755 aa25.48■■□□□ 1.67
UBXN1-212ENST00000531625 RGL2O15211 777 aa25.45■■□□□ 1.66
UBXN1-212ENST00000531625 SNRPA1P09661 255 aaKnown RBP25.45■■□□□ 1.66
UBXN1-212ENST00000531625 CHADLQ6NUI6 762 aa25.45■■□□□ 1.66
UBXN1-212ENST00000531625 NBPF5PQ86XG9 351 aaPredicted RBP25.45■■□□□ 1.66
UBXN1-212ENST00000531625 C7orf43Q8WVR3 580 aa25.45■■□□□ 1.66
UBXN1-212ENST00000531625 NUDCQ9Y266 331 aa25.45■■□□□ 1.66
UBXN1-212ENST00000531625 ZNF652Q9Y2D9 606 aa25.45■■□□□ 1.66
UBXN1-212ENST00000531625 ARFGEF2Q9Y6D5 1785 aa25.45■■□□□ 1.66
UBXN1-212ENST00000531625 HSPA1AP0DMV8 641 aaKnown RBP25.44■■□□□ 1.66
UBXN1-212ENST00000531625 HSPA1BP0DMV9 641 aaKnown RBP25.44■■□□□ 1.66
UBXN1-212ENST00000531625 TNS4Q8IZW8 715 aa25.44■■□□□ 1.66
UBXN1-212ENST00000531625 KLRG2A4D1S0 409 aaPredicted RBP25.43■■□□□ 1.66
UBXN1-212ENST00000531625 DDNO94850 711 aaPredicted RBP25.43■■□□□ 1.66
UBXN1-212ENST00000531625 PIP4K2AP48426 406 aaPredicted RBP25.43■■□□□ 1.66
UBXN1-212ENST00000531625 RTF1Q92541 710 aaKnown RBP25.43■■□□□ 1.66
UBXN1-212ENST00000531625 PRAMEF22A3QJZ6 481 aa25.42■■□□□ 1.66
UBXN1-212ENST00000531625 CREBZFQ9NS37 354 aa25.42■■□□□ 1.66
UBXN1-212ENST00000531625 NPR1P16066 1061 aa25.41■■□□□ 1.66
UBXN1-212ENST00000531625 CACNA1SQ13698 1873 aa25.4■■□□□ 1.66
UBXN1-212ENST00000531625 HTATSF1O43719 755 aaKnown RBP25.4■■□□□ 1.66
UBXN1-212ENST00000531625 CCDC93Q567U6 631 aa25.4■■□□□ 1.66
UBXN1-212ENST00000531625 TPTE2Q6XPS3 522 aa25.4■■□□□ 1.66
UBXN1-212ENST00000531625 MCM10Q7L590 875 aa25.4■■□□□ 1.66
UBXN1-212ENST00000531625 L3MBTL3Q96JM7 780 aaPredicted RBP25.4■■□□□ 1.66
UBXN1-212ENST00000531625 IQCA1LA6NCM1 817 aa25.39■■□□□ 1.66
UBXN1-212ENST00000531625 NBPF26B4DH59 902 aa25.39■■□□□ 1.66
UBXN1-212ENST00000531625 POTEIP0CG38 1075 aa25.39■■□□□ 1.66
UBXN1-212ENST00000531625 POTEJP0CG39 1038 aa25.39■■□□□ 1.66
UBXN1-212ENST00000531625 U2AF1L5P0DN76 240 aaPredicted RBP25.39■■□□□ 1.66
UBXN1-212ENST00000531625 U2AF1Q01081 240 aaKnown RBP eCLIP25.39■■□□□ 1.66
UBXN1-212ENST00000531625 NBPF10Q6P3W6 841 aaKnown RBP25.39■■□□□ 1.66
UBXN1-212ENST00000531625 NBPF15Q8N660 670 aa25.39■■□□□ 1.66
UBXN1-212ENST00000531625 NIP7Q9Y221 180 aaKnown RBP eCLIP25.37■■□□□ 1.65
UBXN1-212ENST00000531625 SCN4AP35499 1836 aa25.36■■□□□ 1.65
UBXN1-212ENST00000531625 PPP2R1AP30153 589 aa25.36■■□□□ 1.65
UBXN1-212ENST00000531625 FKBP4Q02790 459 aaKnown RBP eCLIP25.36■■□□□ 1.65
UBXN1-212ENST00000531625 LDHDQ86WU2 507 aa25.36■■□□□ 1.65
UBXN1-212ENST00000531625 TAF1DQ9H5J8 278 aaPredicted RBP25.35■■□□□ 1.65
UBXN1-212ENST00000531625 DCTN1Q14203 1278 aa25.34■■□□□ 1.65
UBXN1-212ENST00000531625 TAF7Q15545 349 aaPredicted RBP25.34■■□□□ 1.65
UBXN1-212ENST00000531625 RTKN2Q8IZC4 609 aa25.34■■□□□ 1.65
UBXN1-212ENST00000531625 PASKQ96RG2 1323 aa25.34■■□□□ 1.65
UBXN1-212ENST00000531625 CAPN15O75808 1086 aa25.33■■□□□ 1.65
UBXN1-212ENST00000531625 MKRN1Q9UHC7 482 aaKnown RBP25.33■■□□□ 1.65
UBXN1-212ENST00000531625 ALDH1B1P30837 517 aa25.32■■□□□ 1.64
UBXN1-212ENST00000531625 ZNF277Q9NRM2 450 aaPredicted RBP25.32■■□□□ 1.64
UBXN1-212ENST00000531625 HLFQ16534 295 aa25.31■■□□□ 1.64
UBXN1-212ENST00000531625 CNTNAP1P78357 1384 aa25.31■■□□□ 1.64
UBXN1-212ENST00000531625 ZNF541Q9H0D2 1346 aa25.3■■□□□ 1.64
UBXN1-212ENST00000531625 OLFM4Q6UX06 510 aa25.29■■□□□ 1.64
UBXN1-212ENST00000531625 HACL1Q9UJ83 578 aa25.29■■□□□ 1.64
UBXN1-212ENST00000531625 FAM177BA6PVY3 158 aa25.28■■□□□ 1.64
UBXN1-212ENST00000531625 FZD9O00144 591 aa25.28■■□□□ 1.64
UBXN1-212ENST00000531625 ITGBL1O95965 494 aaPredicted RBP25.28■■□□□ 1.64
UBXN1-212ENST00000531625 GTF2E1P29083 439 aaPredicted RBP25.28■■□□□ 1.64
UBXN1-212ENST00000531625 CRY2Q49AN0 593 aa25.28■■□□□ 1.64
UBXN1-212ENST00000531625 ERVV-1B6SEH8 477 aa25.27■■□□□ 1.64
UBXN1-212ENST00000531625 IARSP41252 1262 aaKnown RBP25.27■■□□□ 1.64
UBXN1-212ENST00000531625 NYXQ9GZU5 481 aa25.27■■□□□ 1.64
UBXN1-212ENST00000531625 MIS18AQ9NYP9 233 aa25.27■■□□□ 1.64
UBXN1-212ENST00000531625 SYNE4Q8N205 404 aa25.26■■□□□ 1.63
UBXN1-212ENST00000531625 PNISRQ8TF01 805 aaKnown RBP25.26■■□□□ 1.63
UBXN1-212ENST00000531625 PSMD1Q99460 953 aa25.26■■□□□ 1.63
UBXN1-212ENST00000531625 LAMB4A4D0S4 1761 aa25.26■■□□□ 1.63
UBXN1-212ENST00000531625 TMEM88BA6NKF7 163 aa25.25■■□□□ 1.63
UBXN1-212ENST00000531625 EPHX2P34913 555 aa25.25■■□□□ 1.63
UBXN1-212ENST00000531625 EAPPQ56P03 285 aaPredicted RBP25.25■■□□□ 1.63
UBXN1-212ENST00000531625 CC2D2BQ6DHV5 1058 aa25.25■■□□□ 1.63
UBXN1-212ENST00000531625 PNMA8AQ86V59 439 aaPredicted RBP25.25■■□□□ 1.63
UBXN1-212ENST00000531625 SNED1Q8TER0 1413 aa25.25■■□□□ 1.63
UBXN1-212ENST00000531625 ADAMTSL1Q8N6G6 1762 aa25.23■■□□□ 1.63
UBXN1-212ENST00000531625 MAP3K15Q6ZN16 1313 aa25.23■■□□□ 1.63
UBXN1-212ENST00000531625 GPC2Q8N158 579 aa25.23■■□□□ 1.63
UBXN1-212ENST00000531625 ABCC12Q96J65 1359 aa25.22■■□□□ 1.63
UBXN1-212ENST00000531625 NEFMP07197 916 aa25.22■■□□□ 1.63
UBXN1-212ENST00000531625 HOXA10P31260 410 aaPredicted RBP25.22■■□□□ 1.63
UBXN1-212ENST00000531625 CLEC11AQ9Y240 323 aa25.22■■□□□ 1.63
UBXN1-212ENST00000531625 RIC1Q4ADV7 1423 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 NUP98P52948 1817 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 IBTKQ9P2D0 1353 aaPredicted RBP25.21■■□□□ 1.63
UBXN1-212ENST00000531625 RNF123Q5XPI4 1314 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 FOXN1O15353 648 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 VEGFBP49765 207 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 EIF4A1P60842 406 aaKnown RBP25.21■■□□□ 1.63
UBXN1-212ENST00000531625 GRIPAP1Q4V328 841 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 NUTM1Q86Y26 1132 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 JDP2Q8WYK2 163 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 PRDM10Q9NQV6 1147 aa25.21■■□□□ 1.63
UBXN1-212ENST00000531625 KIF6Q6ZMV9 814 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms