RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 NBPF1Q3BBV0 1214 aa6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 NBPF10Q6P3W6 841 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 PRICKLE2Q7Z3G6 844 aa6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 TSPAN10Q9H1Z9 355 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 CXXC1Q9P0U4 656 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-221ENST00000531582 A0A1B0GTH6 734 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 ZBTB7CA1YPR0 619 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 FIGNL2A6NMB9 653 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 SSFA2P28290 1259 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 NOS2P35228 1153 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 HIF1AQ16665 826 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 C1orf53Q5VUE5 145 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 POTEAQ6S8J7 498 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 KCTD17Q8N5Z5 321 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 C2orf49Q9BVC5 232 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 PRDM10Q9NQV6 1147 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 GMPR2Q9P2T1 348 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 DACH1Q9UI36 760 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
ECHDC1-221ENST00000531582 PRMT3O60678 531 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 TATP17735 454 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 POU4F2Q12837 409 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 OCLNQ16625 522 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 C4orf17Q53FE4 359 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 L3MBTL2Q969R5 705 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 GMCL1Q96IK5 515 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 TIMMDC1Q9NPL8 285 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 KCNG1Q9UIX4 513 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 DNMT3LQ9UJW3 386 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 DYRK1BQ9Y463 629 aa6.21□□□□□ -1.42
ECHDC1-221ENST00000531582 TPM2P07951 284 aa6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 ARID4AP29374 1257 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 ANAPC15P60006 121 aa6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 SLC20A2Q08357 652 aa6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 KCNA1Q09470 495 aa6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 MTERF4Q7Z6M4 381 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 CERS3Q8IU89 383 aa6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 CHMP7Q8WUX9 453 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 PRIMPOLQ96LW4 560 aa6.2□□□□□ -1.42
ECHDC1-221ENST00000531582 H7C1W4 665 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 C21orf2O43822 256 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 KIF20AO95235 890 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 TNNT2P45379 298 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 PLA2G4AP47712 749 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 LBRQ14739 615 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 ZNF295-AS1Q8N0V1 137 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 PGBD3Q8N328 593 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 GPATCH11Q8N954 259 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 YY1AP1Q9H869 796 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 TMEM51Q9NW97 253 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 HDAC5Q9UQL6 1122 aa6.19□□□□□ -1.42
ECHDC1-221ENST00000531582 GOLGA6L3A6NEY3 463 aa6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 EML1O00423 815 aa6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 F11P03951 625 aa6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 RGS3P49796 1198 aa6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 TMED8Q6PL24 325 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 NPAS3Q8IXF0 933 aa6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 ANKIB1Q9P2G1 1089 aa6.18□□□□□ -1.42
ECHDC1-221ENST00000531582 ABCC9O60706 1549 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 SLC35F4A4IF30 521 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 APPP05067 770 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 RHOQP17081 205 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 PHKA2P46019 1235 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 PTSQ03393 145 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 RTN1Q16799 776 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 TBCELQ5QJ74 424 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 ZNF787Q6DD87 383 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 FAM43BQ6ZT52 329 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 ZDHHC1Q8WTX9 485 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 MYO19Q96H55 970 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 PRDM16Q9HAZ2 1276 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 NEUROD4Q9HD90 331 aa6.17□□□□□ -1.42
ECHDC1-221ENST00000531582 TTC36A6NLP5 189 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 SNRPBP14678 240 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 MSX1P28360 303 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 FKBP5Q13451 457 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 EFHC2Q5JST6 749 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 CC2D1BQ5T0F9 858 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 BICDL1Q6ZP65 573 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 NBPF11Q86T75 865 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 NLRP8Q86W28 1048 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 ALDH16A1Q8IZ83 802 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 ZNF830Q96NB3 372 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 CRISPLD1Q9H336 500 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 GNEQ9Y223 722 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 USP3Q9Y6I4 520 aa6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 CFAP65Q6ZU64 1925 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-221ENST00000531582 ARSJQ5FYB0 599 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 C16orf46Q6P387 395 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 FIGNL1Q6PIW4 674 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 CCDC155Q8N6L0 562 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 RHPN1Q8TCX5 695 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 GAS2L1Q99501 681 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 PHACTR1Q9C0D0 580 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 SLAIN2Q9P270 581 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 EGFL7Q9UHF1 273 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 HCN4Q9Y3Q4 1203 aa6.15□□□□□ -1.42
ECHDC1-221ENST00000531582 GJA3Q9Y6H8 435 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms