RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
CTSB-222ENST00000531551 MSH5O43196 834 aa22.45■■□□□ 1.19
CTSB-222ENST00000531551 API5Q9BZZ5 524 aaKnown RBP22.45■■□□□ 1.19
CTSB-222ENST00000531551 TRIM27P14373 513 aa22.45■■□□□ 1.18
CTSB-222ENST00000531551 SSFA2P28290 1259 aa22.45■■□□□ 1.18
CTSB-222ENST00000531551 RFC4P35249 363 aa22.45■■□□□ 1.18
CTSB-222ENST00000531551 SLC4A10Q6U841 1118 aa22.45■■□□□ 1.18
CTSB-222ENST00000531551 MAP3K2Q9Y2U5 619 aa22.45■■□□□ 1.18
CTSB-222ENST00000531551 KSR2Q6VAB6 950 aa22.44■■□□□ 1.18
CTSB-222ENST00000531551 FTSJ3Q8IY81 847 aaKnown RBP22.44■■□□□ 1.18
CTSB-222ENST00000531551 ARHGAP45Q92619 1136 aa22.44■■□□□ 1.18
CTSB-222ENST00000531551 RREB1Q92766 1687 aa22.44■■□□□ 1.18
CTSB-222ENST00000531551 PLBD2Q8NHP8 589 aa22.43■■□□□ 1.18
CTSB-222ENST00000531551 ZPR1O75312 459 aa22.43■■□□□ 1.18
CTSB-222ENST00000531551 ADRA2BP18089 450 aa22.43■■□□□ 1.18
CTSB-222ENST00000531551 MAP3K15Q6ZN16 1313 aa22.42■■□□□ 1.18
CTSB-222ENST00000531551 SRP68Q9UHB9 627 aaKnown RBP22.42■■□□□ 1.18
CTSB-222ENST00000531551 ADCY9O60503 1353 aa22.42■■□□□ 1.18
CTSB-222ENST00000531551 DNAAF4Q8WXU2 420 aa22.41■■□□□ 1.18
CTSB-222ENST00000531551 NUP188Q5SRE5 1749 aa22.41■■□□□ 1.18
CTSB-222ENST00000531551 HLFQ16534 295 aa22.41■■□□□ 1.18
CTSB-222ENST00000531551 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
CTSB-222ENST00000531551 DZIP1LQ8IYY4 767 aaKnown RBP22.41■■□□□ 1.18
CTSB-222ENST00000531551 NARFQ9UHQ1 456 aa22.41■■□□□ 1.18
CTSB-222ENST00000531551 CAMTA2O94983 1202 aa22.4■■□□□ 1.18
CTSB-222ENST00000531551 C20orf194Q5TEA3 1177 aa22.4■■□□□ 1.18
CTSB-222ENST00000531551 COL23A1Q86Y22 540 aaPredicted RBP22.4■■□□□ 1.18
CTSB-222ENST00000531551 FLAD1Q8NFF5 587 aa22.4■■□□□ 1.18
CTSB-222ENST00000531551 PANK1Q8TE04 598 aa22.4■■□□□ 1.18
CTSB-222ENST00000531551 MYD88Q99836 296 aa22.4■■□□□ 1.18
CTSB-222ENST00000531551 PNPLA7Q6ZV29 1317 aa22.4■■□□□ 1.18
CTSB-222ENST00000531551 ERVV-1B6SEH8 477 aa22.39■■□□□ 1.17
CTSB-222ENST00000531551 MS4A1P11836 297 aa22.39■■□□□ 1.17
CTSB-222ENST00000531551 RNF123Q5XPI4 1314 aa22.39■■□□□ 1.17
CTSB-222ENST00000531551 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
CTSB-222ENST00000531551 NEXNQ0ZGT2 675 aa22.38■■□□□ 1.17
CTSB-222ENST00000531551 ATP5J2-PTCD1G3V325 749 aa22.37■■□□□ 1.17
CTSB-222ENST00000531551 RLBP1P12271 317 aa22.37■■□□□ 1.17
CTSB-222ENST00000531551 GIGYF2Q6Y7W6 1299 aaKnown RBP22.37■■□□□ 1.17
CTSB-222ENST00000531551 METTL22Q9BUU2 404 aaPredicted RBP22.37■■□□□ 1.17
CTSB-222ENST00000531551 ZNF652Q9Y2D9 606 aa22.37■■□□□ 1.17
CTSB-222ENST00000531551 USP42Q9H9J4 1324 aaKnown RBP22.37■■□□□ 1.17
CTSB-222ENST00000531551 CACNA1FO60840 1977 aa22.37■■□□□ 1.17
CTSB-222ENST00000531551 TMEM57Q8N5G2 664 aa22.37■■□□□ 1.17
CTSB-222ENST00000531551 UBR3Q6ZT12 1888 aa22.36■■□□□ 1.17
CTSB-222ENST00000531551 ABCC4O15439 1325 aa22.36■■□□□ 1.17
CTSB-222ENST00000531551 GPTP24298 496 aa22.35■■□□□ 1.17
CTSB-222ENST00000531551 PDE3AQ14432 1141 aa22.35■■□□□ 1.17
CTSB-222ENST00000531551 TCIRG1Q13488 830 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 R3HDM1Q15032 1099 aaKnown RBP22.34■■□□□ 1.17
CTSB-222ENST00000531551 HSP90AB3PQ58FF7 597 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 BICDL1Q6ZP65 573 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 ITPRIPQ8IWB1 547 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 BCL2L12Q9HB09 334 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 COG6Q9Y2V7 657 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 CWF19L2Q2TBE0 894 aaKnown RBP22.34■■□□□ 1.17
CTSB-222ENST00000531551 BEND3Q5T5X7 828 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 SRCIN1Q9C0H9 1055 aa22.34■■□□□ 1.17
CTSB-222ENST00000531551 CCT4P50991 539 aaKnown RBP22.33■■□□□ 1.17
CTSB-222ENST00000531551 GYS1P13807 737 aa22.32■■□□□ 1.16
CTSB-222ENST00000531551 FKBP8Q14318 412 aa22.32■■□□□ 1.16
CTSB-222ENST00000531551 CLEC4GQ6UXB4 293 aa22.32■■□□□ 1.16
CTSB-222ENST00000531551 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
CTSB-222ENST00000531551 NIP7Q9Y221 180 aaKnown RBP eCLIP22.32■■□□□ 1.161e-6■■■■□ 21.2
CTSB-222ENST00000531551 IGKV5-2P06315 115 aa22.32■■□□□ 1.16
CTSB-222ENST00000531551 LINS1Q8NG48 757 aa22.32■■□□□ 1.16
CTSB-222ENST00000531551 PSDA5PKW4 1024 aaPredicted RBP22.31■■□□□ 1.16
CTSB-222ENST00000531551 TBC1D9BQ66K14 1250 aa22.31■■□□□ 1.16
CTSB-222ENST00000531551 INTS3Q68E01 1043 aaKnown RBP22.31■■□□□ 1.16
CTSB-222ENST00000531551 FAM177BA6PVY3 158 aa22.3■■□□□ 1.16
CTSB-222ENST00000531551 MSL1Q68DK7 614 aa22.3■■□□□ 1.16
CTSB-222ENST00000531551 NEURL1BA8MQ27 555 aa22.3■■□□□ 1.16
CTSB-222ENST00000531551 NEFLP07196 543 aa22.3■■□□□ 1.16
CTSB-222ENST00000531551 C4AP0C0L4 1744 aa22.3■■□□□ 1.16
CTSB-222ENST00000531551 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
CTSB-222ENST00000531551 ARFGEF2Q9Y6D5 1785 aa22.29■■□□□ 1.16
CTSB-222ENST00000531551 SOCS7O14512 581 aa22.29■■□□□ 1.16
CTSB-222ENST00000531551 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
CTSB-222ENST00000531551 CRBNQ96SW2 442 aa22.29■■□□□ 1.16
CTSB-222ENST00000531551 ISCA1Q9BUE6 129 aa22.29■■□□□ 1.16
CTSB-222ENST00000531551 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
CTSB-222ENST00000531551 ZNF34Q8IZ26 560 aa22.28■■□□□ 1.16
CTSB-222ENST00000531551 SETDB2Q96T68 719 aa22.28■■□□□ 1.16
CTSB-222ENST00000531551 CWC25Q9NXE8 425 aaPredicted RBP22.28■■□□□ 1.16
CTSB-222ENST00000531551 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
CTSB-222ENST00000531551 ALDH1L1O75891 902 aa22.28■■□□□ 1.16
CTSB-222ENST00000531551 UBN2Q6ZU65 1347 aa22.27■■□□□ 1.16
CTSB-222ENST00000531551 RGL2O15211 777 aa22.27■■□□□ 1.16
CTSB-222ENST00000531551 RTL5Q5HYW3 569 aaPredicted RBP22.27■■□□□ 1.16
CTSB-222ENST00000531551 NLRP10Q86W26 655 aa22.27■■□□□ 1.16
CTSB-222ENST00000531551 NLGN1Q8N2Q7 840 aa22.27■■□□□ 1.16
CTSB-222ENST00000531551 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
CTSB-222ENST00000531551 C9orf78Q9NZ63 289 aaPredicted RBP22.27■■□□□ 1.16
CTSB-222ENST00000531551 GCKRQ14397 625 aa22.26■■□□□ 1.15
CTSB-222ENST00000531551 NFIXQ14938 502 aa22.26■■□□□ 1.15
CTSB-222ENST00000531551 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
CTSB-222ENST00000531551 JARID2Q92833 1246 aaPredicted RBP22.26■■□□□ 1.15
CTSB-222ENST00000531551 DDX19BQ9UMR2 479 aa22.26■■□□□ 1.15
CTSB-222ENST00000531551 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
CTSB-222ENST00000531551 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms