RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
C11orf54-210ENST00000531516 CNKSR1Q969H4 720 aa16.39■□□□□ 0.21
C11orf54-210ENST00000531516 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
C11orf54-210ENST00000531516 KIF13BQ9NQT8 1826 aa16.39■□□□□ 0.21
C11orf54-210ENST00000531516 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
C11orf54-210ENST00000531516 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
C11orf54-210ENST00000531516 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
C11orf54-210ENST00000531516 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
C11orf54-210ENST00000531516 MAP3K15Q6ZN16 1313 aa16.37■□□□□ 0.21
C11orf54-210ENST00000531516 MASTLQ96GX5 879 aa16.36■□□□□ 0.21
C11orf54-210ENST00000531516 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
C11orf54-210ENST00000531516 FAM177BA6PVY3 158 aa16.35■□□□□ 0.21
C11orf54-210ENST00000531516 CHL1O00533 1208 aa16.35■□□□□ 0.21
C11orf54-210ENST00000531516 STYK1Q6J9G0 422 aa16.35■□□□□ 0.21
C11orf54-210ENST00000531516 CCDC24Q8N4L8 307 aa16.35■□□□□ 0.21
C11orf54-210ENST00000531516 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
C11orf54-210ENST00000531516 N4BP2Q86UW6 1770 aaPredicted RBP16.35■□□□□ 0.21
C11orf54-210ENST00000531516 ADCY9O60503 1353 aa16.35■□□□□ 0.21
C11orf54-210ENST00000531516 SCN7AQ01118 1682 aa16.34■□□□□ 0.21
C11orf54-210ENST00000531516 APAF1O14727 1248 aa16.34■□□□□ 0.21
C11orf54-210ENST00000531516 HOXB7P09629 217 aa16.34■□□□□ 0.21
C11orf54-210ENST00000531516 GNAI1P63096 354 aa16.34■□□□□ 0.21
C11orf54-210ENST00000531516 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
C11orf54-210ENST00000531516 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
C11orf54-210ENST00000531516 NPR1P16066 1061 aa16.33■□□□□ 0.2
C11orf54-210ENST00000531516 LMNB1P20700 586 aa16.33■□□□□ 0.2
C11orf54-210ENST00000531516 HLFQ16534 295 aa16.33■□□□□ 0.2
C11orf54-210ENST00000531516 HSP90AB3PQ58FF7 597 aa16.33■□□□□ 0.2
C11orf54-210ENST00000531516 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
C11orf54-210ENST00000531516 ZBTB3Q9H5J0 574 aa16.33■□□□□ 0.2
C11orf54-210ENST00000531516 SRGNP10124 158 aa16.32■□□□□ 0.2
C11orf54-210ENST00000531516 ALDH1B1P30837 517 aa16.32■□□□□ 0.2
C11orf54-210ENST00000531516 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
C11orf54-210ENST00000531516 HDGFL1Q5TGJ6 251 aa16.32■□□□□ 0.2
C11orf54-210ENST00000531516 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
C11orf54-210ENST00000531516 TTLL7Q6ZT98 887 aa16.32■□□□□ 0.2
C11orf54-210ENST00000531516 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
C11orf54-210ENST00000531516 MRS2Q9HD23 443 aa16.32■□□□□ 0.2
C11orf54-210ENST00000531516 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
C11orf54-210ENST00000531516 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 C21orf2O43822 256 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 NECTIN2Q92692 538 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
C11orf54-210ENST00000531516 IFT57Q9NWB7 429 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 DBF4Q9UBU7 674 aaPredicted RBP16.31■□□□□ 0.2
C11orf54-210ENST00000531516 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
C11orf54-210ENST00000531516 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
C11orf54-210ENST00000531516 GPTP24298 496 aa16.3■□□□□ 0.2
C11orf54-210ENST00000531516 AIMP1Q12904 312 aaKnown RBP16.3■□□□□ 0.2
C11orf54-210ENST00000531516 PRPF40BQ6NWY9 871 aaKnown RBP16.3■□□□□ 0.2
C11orf54-210ENST00000531516 RPGRQ92834 1020 aaKnown RBP16.3■□□□□ 0.2
C11orf54-210ENST00000531516 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
C11orf54-210ENST00000531516 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
C11orf54-210ENST00000531516 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
C11orf54-210ENST00000531516 COPS6Q7L5N1 327 aa16.29■□□□□ 0.2
C11orf54-210ENST00000531516 TAOK3Q9H2K8 898 aa16.29■□□□□ 0.2
C11orf54-210ENST00000531516 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
C11orf54-210ENST00000531516 RASSF7Q02833 373 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 XAGE3Q8WTP9 111 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 MBIPQ9NS73 344 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 HYPKQ9NX55 129 aa16.28■□□□□ 0.2
C11orf54-210ENST00000531516 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
C11orf54-210ENST00000531516 AFDNP55196 1824 aaKnown RBP16.27■□□□□ 0.2
C11orf54-210ENST00000531516 KLRG2A4D1S0 409 aaPredicted RBP16.27■□□□□ 0.2
C11orf54-210ENST00000531516 PDIA6Q15084 440 aa16.27■□□□□ 0.2
C11orf54-210ENST00000531516 ZNF34Q8IZ26 560 aa16.27■□□□□ 0.2
C11orf54-210ENST00000531516 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.2
C11orf54-210ENST00000531516 BCORQ6W2J9 1755 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 ANXA1P04083 346 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
C11orf54-210ENST00000531516 TOMM70O94826 608 aa16.25■□□□□ 0.19
C11orf54-210ENST00000531516 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
C11orf54-210ENST00000531516 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
C11orf54-210ENST00000531516 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
C11orf54-210ENST00000531516 SUSD4Q5VX71 490 aa16.25■□□□□ 0.19
C11orf54-210ENST00000531516 CC2D2BQ6DHV5 1058 aa16.25■□□□□ 0.19
C11orf54-210ENST00000531516 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
C11orf54-210ENST00000531516 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 ANKRD13DQ6ZTN6 518 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 PLBD2Q8NHP8 589 aa16.24■□□□□ 0.19
C11orf54-210ENST00000531516 BRCA1P38398 1863 aaKnown RBP16.24■□□□□ 0.19
C11orf54-210ENST00000531516 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
C11orf54-210ENST00000531516 NFKBIEO00221 500 aa16.23■□□□□ 0.19
C11orf54-210ENST00000531516 KIF3CO14782 793 aa16.23■□□□□ 0.19
C11orf54-210ENST00000531516 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
C11orf54-210ENST00000531516 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
C11orf54-210ENST00000531516 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms