RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 STYK1Q6J9G0 422 aa19.31■□□□□ 0.68
CTSB-221ENST00000531502 DPY19L2Q6NUT2 758 aa19.31■□□□□ 0.68
CTSB-221ENST00000531502 DZIP3Q86Y13 1208 aaKnown RBP19.31■□□□□ 0.68
CTSB-221ENST00000531502 CACNA1SQ13698 1873 aa19.31■□□□□ 0.68
CTSB-221ENST00000531502 CNKSR1Q969H4 720 aa19.3■□□□□ 0.68
CTSB-221ENST00000531502 ST5P78524 1137 aa19.29■□□□□ 0.68
CTSB-221ENST00000531502 PRPF40BQ6NWY9 871 aaKnown RBP19.29■□□□□ 0.68
CTSB-221ENST00000531502 CLEC4GQ6UXB4 293 aa19.29■□□□□ 0.68
CTSB-221ENST00000531502 MASTLQ96GX5 879 aa19.29■□□□□ 0.68
CTSB-221ENST00000531502 TAOK3Q9H2K8 898 aa19.29■□□□□ 0.68
CTSB-221ENST00000531502 MCM10Q7L590 875 aa19.28■□□□□ 0.68
CTSB-221ENST00000531502 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
CTSB-221ENST00000531502 C7orf43Q8WVR3 580 aa19.28■□□□□ 0.68
CTSB-221ENST00000531502 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
CTSB-221ENST00000531502 KLRG2A4D1S0 409 aaPredicted RBP19.27■□□□□ 0.68
CTSB-221ENST00000531502 SNRPA1P09661 255 aaKnown RBP19.27■□□□□ 0.68
CTSB-221ENST00000531502 NBPF26B4DH59 902 aa19.26■□□□□ 0.67
CTSB-221ENST00000531502 PPP2R1AP30153 589 aa19.26■□□□□ 0.67
CTSB-221ENST00000531502 NBPF10Q6P3W6 841 aaKnown RBP19.26■□□□□ 0.67
CTSB-221ENST00000531502 NBPF15Q8N660 670 aa19.26■□□□□ 0.67
CTSB-221ENST00000531502 NPHP1O15259 732 aa19.25■□□□□ 0.67
CTSB-221ENST00000531502 DDNO94850 711 aaPredicted RBP19.25■□□□□ 0.67
CTSB-221ENST00000531502 POTEIP0CG38 1075 aa19.25■□□□□ 0.67
CTSB-221ENST00000531502 POTEJP0CG39 1038 aa19.25■□□□□ 0.67
CTSB-221ENST00000531502 DCTN1Q14203 1278 aa19.25■□□□□ 0.67
CTSB-221ENST00000531502 SOGA3Q5TF21 947 aa19.25■□□□□ 0.67
CTSB-221ENST00000531502 NBPF5PQ86XG9 351 aaPredicted RBP19.25■□□□□ 0.67
CTSB-221ENST00000531502 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
CTSB-221ENST00000531502 RGL2O15211 777 aa19.24■□□□□ 0.67
CTSB-221ENST00000531502 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
CTSB-221ENST00000531502 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
CTSB-221ENST00000531502 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
CTSB-221ENST00000531502 HTATSF1O43719 755 aaKnown RBP19.23■□□□□ 0.67
CTSB-221ENST00000531502 CHADLQ6NUI6 762 aa19.23■□□□□ 0.67
CTSB-221ENST00000531502 ZNF652Q9Y2D9 606 aa19.23■□□□□ 0.67
CTSB-221ENST00000531502 HSPA1AP0DMV8 641 aaKnown RBP19.22■□□□□ 0.67
CTSB-221ENST00000531502 HSPA1BP0DMV9 641 aaKnown RBP19.22■□□□□ 0.67
CTSB-221ENST00000531502 NPR1P16066 1061 aa19.22■□□□□ 0.67
CTSB-221ENST00000531502 CCDC93Q567U6 631 aa19.21■□□□□ 0.67
CTSB-221ENST00000531502 L3MBTL3Q96JM7 780 aaPredicted RBP19.21■□□□□ 0.67
CTSB-221ENST00000531502 NIP7Q9Y221 180 aaKnown RBP eCLIP19.21■□□□□ 0.673e-7■■■■□ 21.9
CTSB-221ENST00000531502 SCN4AP35499 1836 aa19.21■□□□□ 0.67
CTSB-221ENST00000531502 TAF7Q15545 349 aaPredicted RBP19.2■□□□□ 0.66
CTSB-221ENST00000531502 HLFQ16534 295 aa19.2■□□□□ 0.66
CTSB-221ENST00000531502 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
CTSB-221ENST00000531502 CREBZFQ9NS37 354 aa19.2■□□□□ 0.66
CTSB-221ENST00000531502 LAMB4A4D0S4 1761 aa19.19■□□□□ 0.66
CTSB-221ENST00000531502 FKBP4Q02790 459 aaKnown RBP eCLIP19.19■□□□□ 0.66
CTSB-221ENST00000531502 OLFM4Q6UX06 510 aa19.19■□□□□ 0.66
CTSB-221ENST00000531502 TNS4Q8IZW8 715 aa19.19■□□□□ 0.66
CTSB-221ENST00000531502 TAF1DQ9H5J8 278 aaPredicted RBP19.18■□□□□ 0.66
CTSB-221ENST00000531502 MIS18AQ9NYP9 233 aa19.18■□□□□ 0.66
CTSB-221ENST00000531502 PASKQ96RG2 1323 aa19.18■□□□□ 0.66
CTSB-221ENST00000531502 DLG5Q8TDM6 1919 aa19.17■□□□□ 0.66
CTSB-221ENST00000531502 SNED1Q8TER0 1413 aa19.17■□□□□ 0.66
CTSB-221ENST00000531502 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
CTSB-221ENST00000531502 ZNF277Q9NRM2 450 aaPredicted RBP19.17■□□□□ 0.66
CTSB-221ENST00000531502 ZNF541Q9H0D2 1346 aa19.17■□□□□ 0.66
CTSB-221ENST00000531502 KDM3BQ7LBC6 1761 aa19.16■□□□□ 0.66
CTSB-221ENST00000531502 FAM177BA6PVY3 158 aa19.16■□□□□ 0.66
CTSB-221ENST00000531502 LDHDQ86WU2 507 aa19.16■□□□□ 0.66
CTSB-221ENST00000531502 ADAMTSL1Q8N6G6 1762 aa19.15■□□□□ 0.66
CTSB-221ENST00000531502 RTKN2Q8IZC4 609 aa19.15■□□□□ 0.66
CTSB-221ENST00000531502 MKRN1Q9UHC7 482 aaKnown RBP19.15■□□□□ 0.66
CTSB-221ENST00000531502 NUP98P52948 1817 aa19.15■□□□□ 0.66
CTSB-221ENST00000531502 FZD9O00144 591 aa19.14■□□□□ 0.65
CTSB-221ENST00000531502 ITGBL1O95965 494 aaPredicted RBP19.14■□□□□ 0.65
CTSB-221ENST00000531502 ALDH1B1P30837 517 aa19.14■□□□□ 0.65
CTSB-221ENST00000531502 CRY2Q49AN0 593 aa19.14■□□□□ 0.65
CTSB-221ENST00000531502 ABCC12Q96J65 1359 aa19.14■□□□□ 0.65
CTSB-221ENST00000531502 ERVV-1B6SEH8 477 aa19.13■□□□□ 0.65
CTSB-221ENST00000531502 CAPN15O75808 1086 aa19.13■□□□□ 0.65
CTSB-221ENST00000531502 SYNE4Q8N205 404 aa19.13■□□□□ 0.65
CTSB-221ENST00000531502 PLEKHF1Q96S99 279 aa19.13■□□□□ 0.65
CTSB-221ENST00000531502 CNTNAP1P78357 1384 aa19.13■□□□□ 0.65
CTSB-221ENST00000531502 MAP3K15Q6ZN16 1313 aa19.12■□□□□ 0.65
CTSB-221ENST00000531502 IARSP41252 1262 aaKnown RBP19.12■□□□□ 0.65
CTSB-221ENST00000531502 EIF4A1P60842 406 aaKnown RBP19.12■□□□□ 0.65
CTSB-221ENST00000531502 TTLL7Q6ZT98 887 aa19.11■□□□□ 0.65
CTSB-221ENST00000531502 NUTM1Q86Y26 1132 aa19.11■□□□□ 0.65
CTSB-221ENST00000531502 NGEFQ8N5V2 710 aa19.11■□□□□ 0.65
CTSB-221ENST00000531502 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
CTSB-221ENST00000531502 PSMD1Q99460 953 aa19.11■□□□□ 0.65
CTSB-221ENST00000531502 HACL1Q9UJ83 578 aa19.11■□□□□ 0.65
CTSB-221ENST00000531502 RIC1Q4ADV7 1423 aa19.1■□□□□ 0.65
CTSB-221ENST00000531502 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
CTSB-221ENST00000531502 GTF2E1P29083 439 aaPredicted RBP19.1■□□□□ 0.65
CTSB-221ENST00000531502 EPHX2P34913 555 aa19.1■□□□□ 0.65
CTSB-221ENST00000531502 NYXQ9GZU5 481 aa19.1■□□□□ 0.65
CTSB-221ENST00000531502 COL4A5P29400 1685 aa19.1■□□□□ 0.65
CTSB-221ENST00000531502 IBTKQ9P2D0 1353 aaPredicted RBP19.09■□□□□ 0.65
CTSB-221ENST00000531502 HOXA10P31260 410 aaPredicted RBP19.09■□□□□ 0.65
CTSB-221ENST00000531502 EAPPQ56P03 285 aaPredicted RBP19.09■□□□□ 0.65
CTSB-221ENST00000531502 THUMPD2Q9BTF0 503 aaKnown RBP19.09■□□□□ 0.65
CTSB-221ENST00000531502 RRP7AQ9Y3A4 280 aaKnown RBP19.09■□□□□ 0.65
CTSB-221ENST00000531502 RNF123Q5XPI4 1314 aa19.08■□□□□ 0.65
CTSB-221ENST00000531502 TMEM88BA6NKF7 163 aa19.08■□□□□ 0.64
CTSB-221ENST00000531502 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
CTSB-221ENST00000531502 FOXN1O15353 648 aa19.07■□□□□ 0.64
CTSB-221ENST00000531502 VEGFBP49765 207 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms