RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 NRKQ7Z2Y5 1582 aa9.98□□□□□ -0.81
TRIM53CP-201ENST00000531490 GOLGB1Q14789 3259 aaKnown RBP9.98□□□□□ -0.81
TRIM53CP-201ENST00000531490 TOM1L2Q6ZVM7 507 aa9.98□□□□□ -0.81
TRIM53CP-201ENST00000531490 NUTM1Q86Y26 1132 aa9.98□□□□□ -0.81
TRIM53CP-201ENST00000531490 SALL2Q9Y467 1007 aaPredicted RBP9.98□□□□□ -0.81
TRIM53CP-201ENST00000531490 PHRF1Q9P1Y6 1649 aaKnown RBP9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 CRB1P82279 1406 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 RNF223E7ERA6 249 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 TXNRD1Q16881 649 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 RNF19BQ6ZMZ0 732 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 NLRP13Q86W25 1043 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 SLC6A16Q9GZN6 736 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 STK32BQ9NY57 414 aa9.97□□□□□ -0.81
TRIM53CP-201ENST00000531490 SLC15A2Q16348 729 aa9.96□□□□□ -0.82
TRIM53CP-201ENST00000531490 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
TRIM53CP-201ENST00000531490 KIAA1210Q9ULL0 1709 aa9.96□□□□□ -0.82
TRIM53CP-201ENST00000531490 LMO7Q8WWI1 1683 aa9.95□□□□□ -0.82
TRIM53CP-201ENST00000531490 ARHGEF28Q8N1W1 1705 aaKnown RBP9.95□□□□□ -0.82
TRIM53CP-201ENST00000531490 PPEF1O14829 653 aaPredicted RBP9.95□□□□□ -0.82
TRIM53CP-201ENST00000531490 SRPK2P78362 688 aaKnown RBP9.95□□□□□ -0.82
TRIM53CP-201ENST00000531490 GUCA2AQ02747 115 aa9.95□□□□□ -0.82
TRIM53CP-201ENST00000531490 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
TRIM53CP-201ENST00000531490 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 Q3C1V9 767 aa9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 ACSBG1Q96GR2 724 aa9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 MTFR1LQ9H019 292 aa9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 CABP1Q9NZU7 370 aa9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 AATKQ6ZMQ8 1374 aa9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 MYOM1P52179 1685 aa9.94□□□□□ -0.82
TRIM53CP-201ENST00000531490 PPIP5K1Q6PFW1 1433 aa9.93□□□□□ -0.82
TRIM53CP-201ENST00000531490 CASZ1Q86V15 1759 aa9.93□□□□□ -0.82
TRIM53CP-201ENST00000531490 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
TRIM53CP-201ENST00000531490 ARXQ96QS3 562 aa9.93□□□□□ -0.82
TRIM53CP-201ENST00000531490 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
TRIM53CP-201ENST00000531490 PEAK1Q9H792 1746 aa9.93□□□□□ -0.82
TRIM53CP-201ENST00000531490 TRPM1Q7Z4N2 1603 aa9.92□□□□□ -0.82
TRIM53CP-201ENST00000531490 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
TRIM53CP-201ENST00000531490 CSB-PGBD3P0DP91 1061 aa9.92□□□□□ -0.82
TRIM53CP-201ENST00000531490 ZNF827Q17R98 1081 aa9.92□□□□□ -0.82
TRIM53CP-201ENST00000531490 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
TRIM53CP-201ENST00000531490 GPR162Q16538 588 aa9.91□□□□□ -0.82
TRIM53CP-201ENST00000531490 ANKLE1Q8NAG6 615 aa9.91□□□□□ -0.82
TRIM53CP-201ENST00000531490 LRRC37A3O60309 1634 aa9.91□□□□□ -0.82
TRIM53CP-201ENST00000531490 ROCK2O75116 1388 aaKnown RBP9.91□□□□□ -0.82
TRIM53CP-201ENST00000531490 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 PARP4Q9UKK3 1724 aaKnown RBP9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 EXOC5O00471 708 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 NDUFV2P19404 249 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 ARHGEF25Q86VW2 580 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 CARD10Q9BWT7 1032 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 TBC1D2Q9BYX2 928 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.82
TRIM53CP-201ENST00000531490 GIGYF1O75420 1035 aaPredicted RBP9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 FDX1P10109 184 aa9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 EMID1Q96A84 441 aaPredicted RBP9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 CARD11Q9BXL7 1154 aa9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 LRRC4BQ9NT99 713 aa9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 V9GY48 417 aaPredicted RBP9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 BCL9O00512 1426 aa9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 USP6P35125 1406 aa9.89□□□□□ -0.83
TRIM53CP-201ENST00000531490 KCNQ4P56696 695 aa9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 NLGN2Q8NFZ4 835 aa9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 CCER1Q8TC90 406 aaPredicted RBP9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 SYMPKQ92797 1274 aaKnown RBP9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 USB1Q9BQ65 265 aaKnown RBP9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 CDCA7Q9BWT1 371 aaPredicted RBP9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 TOPAZ1Q8N9V7 1692 aa9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 PLA2G2CQ5R387 149 aa9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
TRIM53CP-201ENST00000531490 CPSF1Q10570 1443 aaKnown RBP9.87□□□□□ -0.83
TRIM53CP-201ENST00000531490 ITSN1Q15811 1721 aa9.87□□□□□ -0.83
TRIM53CP-201ENST00000531490 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
TRIM53CP-201ENST00000531490 DIXDC1Q155Q3 683 aa9.87□□□□□ -0.83
TRIM53CP-201ENST00000531490 SLIT3O75094 1523 aa9.86□□□□□ -0.83
TRIM53CP-201ENST00000531490 QRICH2Q9H0J4 1663 aa9.86□□□□□ -0.83
TRIM53CP-201ENST00000531490 SLC19A1P41440 591 aa9.86□□□□□ -0.83
TRIM53CP-201ENST00000531490 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
TRIM53CP-201ENST00000531490 MAP3K5Q99683 1374 aa9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 YBX3P16989 372 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 MMP16P51512 607 aa9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 LIAT1Q6ZQX7 453 aa9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 KDM4CQ9H3R0 1056 aa9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 NLRP2Q9NX02 1062 aa9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 BRD4O60885 1362 aaPredicted RBP9.85□□□□□ -0.83
TRIM53CP-201ENST00000531490 CLSPNQ9HAW4 1339 aa9.84□□□□□ -0.83
TRIM53CP-201ENST00000531490 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
TRIM53CP-201ENST00000531490 TNS2Q63HR2 1409 aa9.84□□□□□ -0.83
TRIM53CP-201ENST00000531490 ST20-MTHFSA0A0A6YYL1 179 aa9.84□□□□□ -0.83
TRIM53CP-201ENST00000531490 RGPD3A6NKT7 1758 aaPredicted RBP9.84□□□□□ -0.83
TRIM53CP-201ENST00000531490 RGPD4Q7Z3J3 1758 aa9.84□□□□□ -0.83
TRIM53CP-201ENST00000531490 PNPLA7Q6ZV29 1317 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 EVC2Q86UK5 1308 aa9.83□□□□□ -0.84
TRIM53CP-201ENST00000531490 COL18A1P39060 1754 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms