RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 NPM2Q86SE8 214 aaKnown RBP23.71■■□□□ 1.39
PTPN11-204ENST00000531326 CNBD1Q8NA66 436 aa23.71■■□□□ 1.39
PTPN11-204ENST00000531326 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
PTPN11-204ENST00000531326 ZNF219Q9P2Y4 722 aaPredicted RBP23.7■■□□□ 1.38
PTPN11-204ENST00000531326 DICER1Q9UPY3 1922 aaKnown RBP23.69■■□□□ 1.38
PTPN11-204ENST00000531326 CACNA1SQ13698 1873 aa23.69■■□□□ 1.38
PTPN11-204ENST00000531326 SLX4Q8IY92 1834 aa23.69■■□□□ 1.38
PTPN11-204ENST00000531326 SNRPA1P09661 255 aaKnown RBP23.69■■□□□ 1.38
PTPN11-204ENST00000531326 SRGNP10124 158 aa23.67■■□□□ 1.38
PTPN11-204ENST00000531326 VEGFAP15692 232 aaPredicted RBP23.67■■□□□ 1.38
PTPN11-204ENST00000531326 SMC1BQ8NDV3 1235 aa23.67■■□□□ 1.38
PTPN11-204ENST00000531326 ARFGEF2Q9Y6D5 1785 aa23.67■■□□□ 1.38
PTPN11-204ENST00000531326 POTECB2RU33 542 aa23.66■■□□□ 1.38
PTPN11-204ENST00000531326 NBPF26B4DH59 902 aa23.66■■□□□ 1.38
PTPN11-204ENST00000531326 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
PTPN11-204ENST00000531326 ST5P78524 1137 aa23.66■■□□□ 1.38
PTPN11-204ENST00000531326 NBPF10Q6P3W6 841 aaKnown RBP23.66■■□□□ 1.38
PTPN11-204ENST00000531326 CLEC4GQ6UXB4 293 aa23.66■■□□□ 1.38
PTPN11-204ENST00000531326 NBPF15Q8N660 670 aa23.66■■□□□ 1.38
PTPN11-204ENST00000531326 KLRG1Q96E93 195 aa23.66■■□□□ 1.38
PTPN11-204ENST00000531326 NPHP1O15259 732 aa23.65■■□□□ 1.38
PTPN11-204ENST00000531326 STYK1Q6J9G0 422 aa23.65■■□□□ 1.38
PTPN11-204ENST00000531326 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
PTPN11-204ENST00000531326 PRPF40BQ6NWY9 871 aaKnown RBP23.64■■□□□ 1.37
PTPN11-204ENST00000531326 CNKSR1Q969H4 720 aa23.64■■□□□ 1.37
PTPN11-204ENST00000531326 LTBP3Q9NS15 1303 aa23.63■■□□□ 1.37
PTPN11-204ENST00000531326 TAF7Q15545 349 aaPredicted RBP23.63■■□□□ 1.37
PTPN11-204ENST00000531326 ERFEQ4G0M1 354 aa23.63■■□□□ 1.37
PTPN11-204ENST00000531326 NBPF5PQ86XG9 351 aaPredicted RBP23.63■■□□□ 1.37
PTPN11-204ENST00000531326 MASTLQ96GX5 879 aa23.63■■□□□ 1.37
PTPN11-204ENST00000531326 MIS18AQ9NYP9 233 aa23.63■■□□□ 1.37
PTPN11-204ENST00000531326 JMYQ8N9B5 988 aa23.62■■□□□ 1.37
PTPN11-204ENST00000531326 LAMB4A4D0S4 1761 aa23.62■■□□□ 1.37
PTPN11-204ENST00000531326 PCNTO95613 3336 aa23.61■■□□□ 1.37
PTPN11-204ENST00000531326 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
PTPN11-204ENST00000531326 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
PTPN11-204ENST00000531326 TAOK3Q9H2K8 898 aa23.61■■□□□ 1.37
PTPN11-204ENST00000531326 ZNF652Q9Y2D9 606 aa23.61■■□□□ 1.37
PTPN11-204ENST00000531326 KDM3BQ7LBC6 1761 aa23.6■■□□□ 1.37
PTPN11-204ENST00000531326 DPY19L2Q6NUT2 758 aa23.6■■□□□ 1.37
PTPN11-204ENST00000531326 C7orf43Q8WVR3 580 aa23.59■■□□□ 1.37
PTPN11-204ENST00000531326 NIP7Q9Y221 180 aaKnown RBP eCLIP23.59■■□□□ 1.37
PTPN11-204ENST00000531326 KLRG2A4D1S0 409 aaPredicted RBP23.58■■□□□ 1.37
PTPN11-204ENST00000531326 RGL2O15211 777 aa23.58■■□□□ 1.37
PTPN11-204ENST00000531326 HLFQ16534 295 aa23.58■■□□□ 1.37
PTPN11-204ENST00000531326 PLEKHF1Q96S99 279 aa23.58■■□□□ 1.37
PTPN11-204ENST00000531326 FAM177BA6PVY3 158 aa23.56■■□□□ 1.36
PTPN11-204ENST00000531326 NPR1P16066 1061 aa23.56■■□□□ 1.36
PTPN11-204ENST00000531326 SOGA3Q5TF21 947 aa23.56■■□□□ 1.36
PTPN11-204ENST00000531326 TPTE2Q6XPS3 522 aa23.56■■□□□ 1.36
PTPN11-204ENST00000531326 DDNO94850 711 aaPredicted RBP23.55■■□□□ 1.36
PTPN11-204ENST00000531326 THUMPD2Q9BTF0 503 aaKnown RBP23.54■■□□□ 1.36
PTPN11-204ENST00000531326 EIF4A1P60842 406 aaKnown RBP23.53■■□□□ 1.36
PTPN11-204ENST00000531326 CCDC93Q567U6 631 aa23.53■■□□□ 1.36
PTPN11-204ENST00000531326 OLFM4Q6UX06 510 aa23.53■■□□□ 1.36
PTPN11-204ENST00000531326 NUP98P52948 1817 aa23.53■■□□□ 1.36
PTPN11-204ENST00000531326 NEFMP07197 916 aa23.52■■□□□ 1.36
PTPN11-204ENST00000531326 NFE2L2Q16236 605 aa23.52■■□□□ 1.36
PTPN11-204ENST00000531326 NGEFQ8N5V2 710 aa23.52■■□□□ 1.36
PTPN11-204ENST00000531326 PNISRQ8TF01 805 aaKnown RBP23.52■■□□□ 1.36
PTPN11-204ENST00000531326 POTEIP0CG38 1075 aa23.51■■□□□ 1.35
PTPN11-204ENST00000531326 POTEJP0CG39 1038 aa23.51■■□□□ 1.35
PTPN11-204ENST00000531326 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
PTPN11-204ENST00000531326 FKBP4Q02790 459 aaKnown RBP eCLIP23.5■■□□□ 1.35
PTPN11-204ENST00000531326 TTLL7Q6ZT98 887 aa23.5■■□□□ 1.35
PTPN11-204ENST00000531326 ABCC12Q96J65 1359 aa23.5■■□□□ 1.35
PTPN11-204ENST00000531326 ERVV-1B6SEH8 477 aa23.49■■□□□ 1.35
PTPN11-204ENST00000531326 ZNF277Q9NRM2 450 aaPredicted RBP23.49■■□□□ 1.35
PTPN11-204ENST00000531326 RRP7AQ9Y3A4 280 aaKnown RBP23.49■■□□□ 1.35
PTPN11-204ENST00000531326 MAP3K15Q6ZN16 1313 aa23.49■■□□□ 1.35
PTPN11-204ENST00000531326 WDR43Q15061 677 aaKnown RBP eCLIP23.48■■□□□ 1.35
PTPN11-204ENST00000531326 NUTM1Q86Y26 1132 aa23.48■■□□□ 1.35
PTPN11-204ENST00000531326 ADAMTS8Q9UP79 889 aa23.48■■□□□ 1.35
PTPN11-204ENST00000531326 GTF2E1P29083 439 aaPredicted RBP23.47■■□□□ 1.35
PTPN11-204ENST00000531326 COL13A1Q5TAT6 717 aaPredicted RBP23.47■■□□□ 1.35
PTPN11-204ENST00000531326 CHADLQ6NUI6 762 aa23.47■■□□□ 1.35
PTPN11-204ENST00000531326 L3MBTL3Q96JM7 780 aaPredicted RBP23.47■■□□□ 1.35
PTPN11-204ENST00000531326 SNED1Q8TER0 1413 aa23.47■■□□□ 1.35
PTPN11-204ENST00000531326 SCN4AP35499 1836 aa23.47■■□□□ 1.35
PTPN11-204ENST00000531326 MYL6BP14649 208 aa23.46■■□□□ 1.35
PTPN11-204ENST00000531326 ALDH1B1P30837 517 aa23.46■■□□□ 1.35
PTPN11-204ENST00000531326 CRY2Q49AN0 593 aa23.46■■□□□ 1.35
PTPN11-204ENST00000531326 UBN2Q6ZU65 1347 aa23.46■■□□□ 1.35
PTPN11-204ENST00000531326 RTKN2Q8IZC4 609 aa23.46■■□□□ 1.35
PTPN11-204ENST00000531326 ZNF541Q9H0D2 1346 aa23.46■■□□□ 1.35
PTPN11-204ENST00000531326 MAPK8IP3Q9UPT6 1336 aa23.45■■□□□ 1.34
PTPN11-204ENST00000531326 NYXQ9GZU5 481 aa23.45■■□□□ 1.34
PTPN11-204ENST00000531326 GPTP24298 496 aa23.44■■□□□ 1.34
PTPN11-204ENST00000531326 KIF6Q6ZMV9 814 aa23.44■■□□□ 1.34
PTPN11-204ENST00000531326 MIER1Q8N108 512 aa23.44■■□□□ 1.34
PTPN11-204ENST00000531326 ZBTB3Q9H5J0 574 aa23.44■■□□□ 1.34
PTPN11-204ENST00000531326 TAF1DQ9H5J8 278 aaPredicted RBP23.44■■□□□ 1.34
PTPN11-204ENST00000531326 IQCA1LA6NCM1 817 aa23.43■■□□□ 1.34
PTPN11-204ENST00000531326 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
PTPN11-204ENST00000531326 RIC1Q4ADV7 1423 aa23.42■■□□□ 1.34
PTPN11-204ENST00000531326 IBTKQ9P2D0 1353 aaPredicted RBP23.42■■□□□ 1.34
PTPN11-204ENST00000531326 CCER2I3L3R5 266 aa23.42■■□□□ 1.34
PTPN11-204ENST00000531326 IARSP41252 1262 aaKnown RBP23.42■■□□□ 1.34
PTPN11-204ENST00000531326 SUSD4Q5VX71 490 aa23.42■■□□□ 1.34
PTPN11-204ENST00000531326 ZNF34Q8IZ26 560 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms