RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 POLD1P28340 1107 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 SLFN5Q08AF3 891 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 COPS6Q7L5N1 327 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 G2E3Q7L622 706 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 TRMT2AQ8IZ69 625 aaKnown RBP11.93□□□□□ -0.5
SF3B2-210ENST00000530981 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
SF3B2-210ENST00000530981 DDX21Q9NR30 783 aaKnown RBP eCLIP11.93□□□□□ -0.5
SF3B2-210ENST00000530981 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
SF3B2-210ENST00000530981 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
SF3B2-210ENST00000530981 A0A087WZG4 1122 aa11.92□□□□□ -0.5
SF3B2-210ENST00000530981 HOXB7P09629 217 aa11.92□□□□□ -0.5
SF3B2-210ENST00000530981 AIMP1Q12904 312 aaKnown RBP11.92□□□□□ -0.5
SF3B2-210ENST00000530981 TWISTNBQ3B726 338 aaPredicted RBP11.92□□□□□ -0.5
SF3B2-210ENST00000530981 KLHL34Q8N239 644 aa11.92□□□□□ -0.5
SF3B2-210ENST00000530981 PPP1R1BQ9UD71 204 aaPredicted RBP11.92□□□□□ -0.5
SF3B2-210ENST00000530981 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
SF3B2-210ENST00000530981 MAP3K15Q6ZN16 1313 aa11.91□□□□□ -0.5
SF3B2-210ENST00000530981 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
SF3B2-210ENST00000530981 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
SF3B2-210ENST00000530981 SERPINB2P05120 415 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 KCNA3P22001 575 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 C10orf71Q711Q0 1435 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 ANKRD31Q8N7Z5 1873 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
SF3B2-210ENST00000530981 GPTP24298 496 aa11.89□□□□□ -0.51
SF3B2-210ENST00000530981 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
SF3B2-210ENST00000530981 ZNF34Q8IZ26 560 aa11.89□□□□□ -0.51
SF3B2-210ENST00000530981 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
SF3B2-210ENST00000530981 DBF4Q9UBU7 674 aaPredicted RBP11.89□□□□□ -0.51
SF3B2-210ENST00000530981 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
SF3B2-210ENST00000530981 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 CHRNA5P30532 468 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 NIP7Q9Y221 180 aaKnown RBP eCLIP11.88□□□□□ -0.51
SF3B2-210ENST00000530981 CD2APQ9Y5K6 639 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
SF3B2-210ENST00000530981 DPEP1P16444 411 aa11.87□□□□□ -0.51
SF3B2-210ENST00000530981 YBX3P16989 372 aaKnown RBP eCLIP11.87□□□□□ -0.51
SF3B2-210ENST00000530981 SUSD4Q5VX71 490 aa11.87□□□□□ -0.51
SF3B2-210ENST00000530981 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
SF3B2-210ENST00000530981 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
SF3B2-210ENST00000530981 MYH16Q9H6N6 1097 aa11.87□□□□□ -0.51
SF3B2-210ENST00000530981 E9PSI1 815 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 CCDC30Q5VVM6 783 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 KIF6Q6ZMV9 814 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 SLC51AQ86UW1 340 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 ADCY9O60503 1353 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 ARFGEF2Q9Y6D5 1785 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
SF3B2-210ENST00000530981 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
SF3B2-210ENST00000530981 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
SF3B2-210ENST00000530981 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
SF3B2-210ENST00000530981 ATP5J2-PTCD1G3V325 749 aa11.85□□□□□ -0.51
SF3B2-210ENST00000530981 TCIRG1Q13488 830 aa11.85□□□□□ -0.51
SF3B2-210ENST00000530981 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
SF3B2-210ENST00000530981 PLBD2Q8NHP8 589 aa11.85□□□□□ -0.51
SF3B2-210ENST00000530981 COL11A2P13942 1736 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-210ENST00000530981 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
SF3B2-210ENST00000530981 RGL2O15211 777 aa11.84□□□□□ -0.51
SF3B2-210ENST00000530981 NTSR2O95665 410 aa11.84□□□□□ -0.51
SF3B2-210ENST00000530981 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
SF3B2-210ENST00000530981 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
SF3B2-210ENST00000530981 SSH1Q8WYL5 1049 aa11.84□□□□□ -0.51
SF3B2-210ENST00000530981 JARID2Q92833 1246 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-210ENST00000530981 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
SF3B2-210ENST00000530981 PI4KAP2A4QPH2 592 aa11.83□□□□□ -0.52
SF3B2-210ENST00000530981 F6X3S4 739 aa11.83□□□□□ -0.52
SF3B2-210ENST00000530981 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-210ENST00000530981 MRPL50Q8N5N7 158 aaKnown RBP11.83□□□□□ -0.52
SF3B2-210ENST00000530981 PI4KAP1Q8N8J0 262 aa11.83□□□□□ -0.52
SF3B2-210ENST00000530981 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
SF3B2-210ENST00000530981 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
SF3B2-210ENST00000530981 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
SF3B2-210ENST00000530981 COL4A1P02462 1669 aa11.82□□□□□ -0.52
SF3B2-210ENST00000530981 IGKV5-2P06315 115 aa11.82□□□□□ -0.52
SF3B2-210ENST00000530981 FLIIQ13045 1269 aa11.82□□□□□ -0.52
SF3B2-210ENST00000530981 CNBD1Q8NA66 436 aa11.82□□□□□ -0.52
SF3B2-210ENST00000530981 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-210ENST00000530981 TGFB2P61812 414 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 CWF19L2Q2TBE0 894 aaKnown RBP11.81□□□□□ -0.52
SF3B2-210ENST00000530981 KSR2Q6VAB6 950 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 RIC3Q7Z5B4 369 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 MYD88Q99836 296 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
SF3B2-210ENST00000530981 ZBED9Q6R2W3 1325 aa11.81□□□□□ -0.52
SF3B2-210ENST00000530981 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms