RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
RPUSD4-205ENST00000530903 SOS1Q07889 1333 aaPredicted RBP12.81□□□□□ -0.36
RPUSD4-205ENST00000530903 HOXB7P09629 217 aa12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 PSEN1P49768 467 aa12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 CCDC30Q5VVM6 783 aa12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 TJP1Q07157 1748 aa12.8□□□□□ -0.36
RPUSD4-205ENST00000530903 SOCS7O14512 581 aa12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 PALLDQ8WX93 1383 aa12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 CACNA1FO60840 1977 aa12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 C3orf67Q6ZVT6 689 aa12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
RPUSD4-205ENST00000530903 TRIM37O94972 964 aa12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 NOB1Q9ULX3 412 aaKnown RBP12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
RPUSD4-205ENST00000530903 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
RPUSD4-205ENST00000530903 ANXA1P04083 346 aa12.77□□□□□ -0.37
RPUSD4-205ENST00000530903 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
RPUSD4-205ENST00000530903 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
RPUSD4-205ENST00000530903 BCL11AQ9H165 835 aa12.77□□□□□ -0.37
RPUSD4-205ENST00000530903 TNNQ9UQP3 1299 aa12.77□□□□□ -0.37
RPUSD4-205ENST00000530903 LY75O60449 1722 aa12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 NEFLP07196 543 aa12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 PIP4K2AP48426 406 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 C20orf194Q5TEA3 1177 aa12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 G2E3Q7L622 706 aa12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
RPUSD4-205ENST00000530903 LOC102724428A0A0B4J2F2 783 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 ATP6V1AP38606 617 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 SIK1P57059 783 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 CHMP4AQ9BY43 222 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 DBF4Q9UBU7 674 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 ZNF831Q5JPB2 1677 aa12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 CICQ96RK0 1608 aaPredicted RBP12.75□□□□□ -0.37
RPUSD4-205ENST00000530903 COL5A3P25940 1745 aaPredicted RBP12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 MYL6BP14649 208 aa12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 PDAP1Q13442 181 aaKnown RBP12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 PHAXQ9H814 394 aaKnown RBP12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 EP400Q96L91 3159 aa12.74□□□□□ -0.37
RPUSD4-205ENST00000530903 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 STARD3NLO95772 234 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 A1BGP04217 495 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 TRIM27P14373 513 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 KCNQ4P56696 695 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 FLIIQ13045 1269 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 ITPK1Q13572 414 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 PDIA6Q15084 440 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
RPUSD4-205ENST00000530903 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 RLBP1P12271 317 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 KRTAP3-3Q9BYR6 98 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 KRTAP3-2Q9BYR7 98 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 PTPRCP08575 1304 aa12.72□□□□□ -0.37
RPUSD4-205ENST00000530903 FKBP5Q13451 457 aaPredicted RBP12.71□□□□□ -0.37
RPUSD4-205ENST00000530903 FTSJ3Q8IY81 847 aaKnown RBP12.71□□□□□ -0.37
RPUSD4-205ENST00000530903 DZIP1LQ8IYY4 767 aaKnown RBP12.71□□□□□ -0.37
RPUSD4-205ENST00000530903 HYPKQ9NX55 129 aa12.71□□□□□ -0.37
RPUSD4-205ENST00000530903 CCNL1Q9UK58 526 aaPredicted RBP12.71□□□□□ -0.37
RPUSD4-205ENST00000530903 ERBB4Q15303 1308 aa12.71□□□□□ -0.38
RPUSD4-205ENST00000530903 MYH14Q7Z406 1995 aaKnown RBP12.71□□□□□ -0.38
RPUSD4-205ENST00000530903 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.38
RPUSD4-205ENST00000530903 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.38
RPUSD4-205ENST00000530903 CRBNQ96SW2 442 aa12.71□□□□□ -0.38
RPUSD4-205ENST00000530903 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.38
RPUSD4-205ENST00000530903 RREB1Q92766 1687 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 F6X3S4 739 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 APBA3O96018 575 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 CRKLP46109 303 aaKnown RBP12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 PDE3AQ14432 1141 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
RPUSD4-205ENST00000530903 MS4A1P11836 297 aa12.69□□□□□ -0.38
RPUSD4-205ENST00000530903 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
RPUSD4-205ENST00000530903 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms