RNA–Protein interactions for RNA: ENST00000530843.1

NUP214-223, Transcript of nucleoporin 214, human

TSL 5

Gene NUP214, Length 189 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-223	ENST00000530843	ZNF280C	Q8ND82	737 aa		7.59	□□□□□ -1.19
NUP214-223	ENST00000530843	CLP1	Q92989	425 aa	Known RBP	7.59	□□□□□ -1.19
NUP214-223	ENST00000530843	TRERF1	Q96PN7	1200 aa		7.59	□□□□□ -1.19
NUP214-223	ENST00000530843	CFHR5	Q9BXR6	569 aa		7.59	□□□□□ -1.19
NUP214-223	ENST00000530843	DCDC2B	A2VCK2	349 aa		7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	ATXN7	O15265	892 aa	Predicted RBP	7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	FOXO3	O43524	673 aa		7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	CAPN12	Q6ZSI9	719 aa		7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	WHAMM	Q8TF30	809 aa		7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	MBIP	Q9NS73	344 aa		7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	PCDHGC4	Q9Y5F7	938 aa		7.58	□□□□□ -1.2
NUP214-223	ENST00000530843	ADAMTS2	O95450	1211 aa		7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	TNP2	Q05952	138 aa		7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	SUSD3	Q96L08	255 aa		7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	QTRT2	Q9H974	415 aa	Known RBP	7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	STRN4	Q9NRL3	753 aa		7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	IGF1R	P08069	1367 aa		7.57	□□□□□ -1.2
NUP214-223	ENST00000530843	C2CD2L	O14523	706 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	SLURP2	P0DP57	97 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	MAPT	P10636	758 aa	Known RBP	7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	MX2	P20592	715 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	INSM1	Q01101	510 aa	Predicted RBP	7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	CTBS	Q01459	385 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	SRSF11	Q05519	484 aa	Known RBP	7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	SAMD5	Q5TGI4	173 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	FIGNL1	Q6PIW4	674 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	ZSCAN1	Q8NBB4	408 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	BCS1L	Q9Y276	419 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	GPC6	Q9Y625	555 aa	Predicted RBP	7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	GJA3	Q9Y6H8	435 aa		7.56	□□□□□ -1.2
NUP214-223	ENST00000530843	KHNYN	O15037	678 aa	Known RBP	7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	EFS	O43281	561 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	FAM157B	P0CG42	384 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	FGFR3	P22607	806 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	SCNN1A	P37088	669 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	RTN1	Q16799	776 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	MKNK1	Q9BUB5	465 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	LRFN2	Q9ULH4	789 aa		7.55	□□□□□ -1.2
NUP214-223	ENST00000530843	CD33	P20138	364 aa		7.54	□□□□□ -1.2
NUP214-223	ENST00000530843	GRIN2C	Q14957	1233 aa		7.54	□□□□□ -1.2
NUP214-223	ENST00000530843	ZNF385C	Q66K41	422 aa	Predicted RBP	7.54	□□□□□ -1.2
NUP214-223	ENST00000530843	SAP130	Q9H0E3	1048 aa		7.54	□□□□□ -1.2
NUP214-223	ENST00000530843	KLK14	Q9P0G3	267 aa		7.54	□□□□□ -1.2
NUP214-223	ENST00000530843	PHF24	Q9UPV7	400 aa		7.54	□□□□□ -1.2
NUP214-223	ENST00000530843	ATP2B4	P23634	1241 aa		7.53	□□□□□ -1.2
NUP214-223	ENST00000530843	LYPD4	Q6UWN0	246 aa		7.53	□□□□□ -1.2
NUP214-223	ENST00000530843	VTI1A	Q96AJ9	217 aa		7.53	□□□□□ -1.2
NUP214-223	ENST00000530843	MYO19	Q96H55	970 aa		7.53	□□□□□ -1.2
NUP214-223	ENST00000530843	NEUROD4	Q9HD90	331 aa		7.53	□□□□□ -1.2
NUP214-223	ENST00000530843	DMGDH	Q9UI17	866 aa	Known RBP	7.53	□□□□□ -1.2
NUP214-223	ENST00000530843	TYRO3	Q06418	890 aa		7.52	□□□□□ -1.21
NUP214-223	ENST00000530843	SFSWAP	Q12872	951 aa	Known RBP	7.52	□□□□□ -1.21
NUP214-223	ENST00000530843	DGKZ	Q13574	1117 aa		7.52	□□□□□ -1.21
NUP214-223	ENST00000530843	COX20	Q5RI15	118 aa		7.52	□□□□□ -1.21
NUP214-223	ENST00000530843	ACD	Q96AP0	544 aa		7.52	□□□□□ -1.21
NUP214-223	ENST00000530843	BMP4	P12644	408 aa		7.51	□□□□□ -1.21
NUP214-223	ENST00000530843	NAA30	Q147X3	362 aa	Predicted RBP	7.51	□□□□□ -1.21
NUP214-223	ENST00000530843	ANKIB1	Q9P2G1	1089 aa		7.51	□□□□□ -1.21
NUP214-223	ENST00000530843	TGFBR3L	H3BV60	316 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	CELA2B	P08218	269 aa	Predicted RBP	7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	SSFA2	P28290	1259 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	GRN	P28799	593 aa	Known RBP	7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	FAM26D	Q5JW98	314 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	FAM182B	Q5T319	152 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	PHLDB3	Q6NSJ2	640 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	BTLA	Q7Z6A9	289 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	COL26A1	Q96A83	441 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	CEP63	Q96MT8	703 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	BRD7	Q9NPI1	651 aa		7.5	□□□□□ -1.21
NUP214-223	ENST00000530843	MAP2K3	P46734	347 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	C11orf91	Q3C1V1	193 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	IER5	Q5VY09	327 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	RETREG2	Q8NC44	543 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	MARK1	Q9P0L2	795 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	SEPT3	Q9UH03	358 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	KLF15	Q9UIH9	416 aa		7.49	□□□□□ -1.21
NUP214-223	ENST00000530843	TNFRSF10B	O14763	440 aa		7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	ARHGEF15	O94989	841 aa		7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	LAMC2	Q13753	1193 aa		7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	C16orf46	Q6P387	395 aa		7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	SVOP	Q8N4V2	548 aa		7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	SLC30A3	Q99726	388 aa		7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.48	□□□□□ -1.21
NUP214-223	ENST00000530843	PTCD1	O75127	700 aa	Known RBP	7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	IDH3A	P50213	366 aa		7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	KCNQ4	P56696	695 aa		7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	HIF1A	Q16665	826 aa		7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	IFT43	Q96FT9	208 aa		7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.47	□□□□□ -1.21	2e-9	■■■■■ 37.3
NUP214-223	ENST00000530843	STK17A	Q9UEE5	414 aa		7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	UST	Q9Y2C2	406 aa		7.47	□□□□□ -1.21
NUP214-223	ENST00000530843	MICAL2	O94851	1124 aa		7.46	□□□□□ -1.22
NUP214-223	ENST00000530843	BCR	P11274	1271 aa		7.46	□□□□□ -1.22
NUP214-223	ENST00000530843	INPP5B	P32019	993 aa		7.46	□□□□□ -1.22
NUP214-223	ENST00000530843	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.46	□□□□□ -1.22
NUP214-223	ENST00000530843	ETFBKMT	Q8IXQ9	262 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms