RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 TOMM70O94826 608 aa25.42■■□□□ 1.66
SYVN1-212ENST00000530451 DDX10Q13206 875 aaKnown RBP25.42■■□□□ 1.66
SYVN1-212ENST00000530451 ST5P78524 1137 aa25.41■■□□□ 1.66
SYVN1-212ENST00000530451 NGEFQ8N5V2 710 aa25.41■■□□□ 1.66
SYVN1-212ENST00000530451 ARFGEF2Q9Y6D5 1785 aa25.41■■□□□ 1.66
SYVN1-212ENST00000530451 KDM2BQ8NHM5 1336 aa25.4■■□□□ 1.66
SYVN1-212ENST00000530451 C21orf2O43822 256 aa25.4■■□□□ 1.66
SYVN1-212ENST00000530451 NBPF5PQ86XG9 351 aaPredicted RBP25.4■■□□□ 1.66
SYVN1-212ENST00000530451 PNNQ9H307 717 aaKnown RBP25.4■■□□□ 1.66
SYVN1-212ENST00000530451 RRAGCQ9HB90 399 aa25.4■■□□□ 1.66
SYVN1-212ENST00000530451 ZNF652Q9Y2D9 606 aa25.4■■□□□ 1.66
SYVN1-212ENST00000530451 FAM177BA6PVY3 158 aa25.39■■□□□ 1.66
SYVN1-212ENST00000530451 LMNB1P20700 586 aa25.39■■□□□ 1.66
SYVN1-212ENST00000530451 C16orf71Q8IYS4 520 aaPredicted RBP25.39■■□□□ 1.66
SYVN1-212ENST00000530451 PNISRQ8TF01 805 aaKnown RBP25.39■■□□□ 1.66
SYVN1-212ENST00000530451 PDZRN3Q9UPQ7 1066 aa25.39■■□□□ 1.66
SYVN1-212ENST00000530451 NFKBIEO00221 500 aa25.38■■□□□ 1.65
SYVN1-212ENST00000530451 RALBP1Q15311 655 aa25.38■■□□□ 1.65
SYVN1-212ENST00000530451 CLEC4GQ6UXB4 293 aa25.38■■□□□ 1.65
SYVN1-212ENST00000530451 NIP7Q9Y221 180 aaKnown RBP eCLIP25.38■■□□□ 1.65
SYVN1-212ENST00000530451 EIF4A1P60842 406 aaKnown RBP25.37■■□□□ 1.65
SYVN1-212ENST00000530451 HLFQ16534 295 aa25.37■■□□□ 1.65
SYVN1-212ENST00000530451 RRP7AQ9Y3A4 280 aaKnown RBP25.36■■□□□ 1.65
SYVN1-212ENST00000530451 SRGNP10124 158 aa25.34■■□□□ 1.65
SYVN1-212ENST00000530451 RIPK4P57078 832 aa25.34■■□□□ 1.65
SYVN1-212ENST00000530451 MYL6BP14649 208 aa25.33■■□□□ 1.65
SYVN1-212ENST00000530451 STYK1Q6J9G0 422 aa25.33■■□□□ 1.65
SYVN1-212ENST00000530451 CNKSR1Q969H4 720 aa25.33■■□□□ 1.65
SYVN1-212ENST00000530451 MASTLQ96GX5 879 aa25.33■■□□□ 1.65
SYVN1-212ENST00000530451 PRPF40BQ6NWY9 871 aaKnown RBP25.32■■□□□ 1.64
SYVN1-212ENST00000530451 TPTE2Q6XPS3 522 aa25.32■■□□□ 1.64
SYVN1-212ENST00000530451 RBM46Q8TBY0 533 aaKnown RBP25.32■■□□□ 1.64
SYVN1-212ENST00000530451 WDR90Q96KV7 1748 aa25.32■■□□□ 1.64
SYVN1-212ENST00000530451 CCDC146Q8IYE0 955 aa25.31■■□□□ 1.64
SYVN1-212ENST00000530451 TSPYL4Q9UJ04 414 aa25.31■■□□□ 1.64
SYVN1-212ENST00000530451 ZC3H4Q9UPT8 1303 aaKnown RBP25.31■■□□□ 1.64
SYVN1-212ENST00000530451 GLTPD2A6NH11 291 aa25.3■■□□□ 1.64
SYVN1-212ENST00000530451 TTLL7Q6ZT98 887 aa25.3■■□□□ 1.64
SYVN1-212ENST00000530451 MYBBP1AQ9BQG0 1328 aaKnown RBP25.3■■□□□ 1.64
SYVN1-212ENST00000530451 APLP1P51693 650 aa25.29■■□□□ 1.64
SYVN1-212ENST00000530451 GTF2E1P29083 439 aaPredicted RBP25.28■■□□□ 1.64
SYVN1-212ENST00000530451 TMPOP42166 694 aaKnown RBP25.28■■□□□ 1.64
SYVN1-212ENST00000530451 NEUROD2Q15784 382 aa25.28■■□□□ 1.64
SYVN1-212ENST00000530451 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
SYVN1-212ENST00000530451 TAOK3Q9H2K8 898 aa25.28■■□□□ 1.64
SYVN1-212ENST00000530451 RGL2O15211 777 aa25.27■■□□□ 1.64
SYVN1-212ENST00000530451 NPR1P16066 1061 aa25.27■■□□□ 1.64
SYVN1-212ENST00000530451 KIF6Q6ZMV9 814 aa25.27■■□□□ 1.64
SYVN1-212ENST00000530451 ZBTB3Q9H5J0 574 aa25.27■■□□□ 1.64
SYVN1-212ENST00000530451 MAP3K15Q6ZN16 1313 aa25.27■■□□□ 1.64
SYVN1-212ENST00000530451 EIF2S2P20042 333 aaKnown RBP25.26■■□□□ 1.63
SYVN1-212ENST00000530451 GPTP24298 496 aa25.25■■□□□ 1.63
SYVN1-212ENST00000530451 HTRA3P83110 453 aa25.25■■□□□ 1.63
SYVN1-212ENST00000530451 NUTM1Q86Y26 1132 aa25.25■■□□□ 1.63
SYVN1-212ENST00000530451 ERVV-1B6SEH8 477 aa25.24■■□□□ 1.63
SYVN1-212ENST00000530451 VEGFAP15692 232 aaPredicted RBP25.24■■□□□ 1.63
SYVN1-212ENST00000530451 KLRG2A4D1S0 409 aaPredicted RBP25.23■■□□□ 1.63
SYVN1-212ENST00000530451 FSTL1Q12841 308 aa25.23■■□□□ 1.63
SYVN1-212ENST00000530451 SOGA3Q5TF21 947 aa25.23■■□□□ 1.63
SYVN1-212ENST00000530451 DPY19L2Q6NUT2 758 aa25.23■■□□□ 1.63
SYVN1-212ENST00000530451 OLFM4Q6UX06 510 aa25.23■■□□□ 1.63
SYVN1-212ENST00000530451 ABCC12Q96J65 1359 aa25.22■■□□□ 1.63
SYVN1-212ENST00000530451 LTBP3Q9NS15 1303 aa25.22■■□□□ 1.63
SYVN1-212ENST00000530451 ANXA1P04083 346 aa25.22■■□□□ 1.63
SYVN1-212ENST00000530451 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
SYVN1-212ENST00000530451 WDR43Q15061 677 aaKnown RBP eCLIP25.22■■□□□ 1.63
SYVN1-212ENST00000530451 C7orf43Q8WVR3 580 aa25.22■■□□□ 1.63
SYVN1-212ENST00000530451 NECTIN2Q92692 538 aa25.22■■□□□ 1.63
SYVN1-212ENST00000530451 CCDC93Q567U6 631 aa25.21■■□□□ 1.63
SYVN1-212ENST00000530451 NYXQ9GZU5 481 aa25.21■■□□□ 1.63
SYVN1-212ENST00000530451 UBN2Q6ZU65 1347 aa25.2■■□□□ 1.62
SYVN1-212ENST00000530451 SMC1BQ8NDV3 1235 aa25.2■■□□□ 1.62
SYVN1-212ENST00000530451 LAS1LQ9Y4W2 734 aaKnown RBP25.2■■□□□ 1.62
SYVN1-212ENST00000530451 ERBB4Q15303 1308 aa25.19■■□□□ 1.62
SYVN1-212ENST00000530451 ANKRD36CQ5JPF3 1778 aa25.19■■□□□ 1.62
SYVN1-212ENST00000530451 POTECB2RU33 542 aa25.19■■□□□ 1.62
SYVN1-212ENST00000530451 PROSER3Q2NL68 480 aa25.19■■□□□ 1.62
SYVN1-212ENST00000530451 SUSD4Q5VX71 490 aa25.19■■□□□ 1.62
SYVN1-212ENST00000530451 PDIA6Q15084 440 aa25.18■■□□□ 1.62
SYVN1-212ENST00000530451 DNAJC5GQ8N7S2 189 aa25.18■■□□□ 1.62
SYVN1-212ENST00000530451 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
SYVN1-212ENST00000530451 ADAMTS8Q9UP79 889 aa25.18■■□□□ 1.62
SYVN1-212ENST00000530451 DDNO94850 711 aaPredicted RBP25.17■■□□□ 1.62
SYVN1-212ENST00000530451 ALDH1B1P30837 517 aa25.17■■□□□ 1.62
SYVN1-212ENST00000530451 KRT24Q2M2I5 525 aa25.17■■□□□ 1.62
SYVN1-212ENST00000530451 ZNF34Q8IZ26 560 aa25.17■■□□□ 1.62
SYVN1-212ENST00000530451 GIGYF2Q6Y7W6 1299 aaKnown RBP25.16■■□□□ 1.62
SYVN1-212ENST00000530451 ZNF277Q9NRM2 450 aaPredicted RBP25.16■■□□□ 1.62
SYVN1-212ENST00000530451 BABAM1Q9NWV8 329 aa25.16■■□□□ 1.62
SYVN1-212ENST00000530451 TRIM35Q9UPQ4 493 aa25.16■■□□□ 1.62
SYVN1-212ENST00000530451 FKBP4Q02790 459 aaKnown RBP eCLIP25.15■■□□□ 1.62
SYVN1-212ENST00000530451 LRP10Q7Z4F1 713 aa25.15■■□□□ 1.62
SYVN1-212ENST00000530451 AIMP1Q12904 312 aaKnown RBP25.14■■□□□ 1.62
SYVN1-212ENST00000530451 RPGRQ92834 1020 aaKnown RBP25.14■■□□□ 1.62
SYVN1-212ENST00000530451 LAMB2P55268 1798 aa25.13■■□□□ 1.61
SYVN1-212ENST00000530451 NTSR2O95665 410 aa25.13■■□□□ 1.61
SYVN1-212ENST00000530451 CRY2Q49AN0 593 aa25.13■■□□□ 1.61
SYVN1-212ENST00000530451 PRKRIP1Q9H875 184 aaPredicted RBP25.13■■□□□ 1.61
SYVN1-212ENST00000530451 SCN4AP35499 1836 aa25.12■■□□□ 1.61
SYVN1-212ENST00000530451 CHL1O00533 1208 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms