RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LMNB1P20700 586 aa27.62■■■□□ 2.01
SMPD1-204ENST00000530395 RGL2O15211 777 aa27.61■■■□□ 2.01
SMPD1-204ENST00000530395 C16orf71Q8IYS4 520 aaPredicted RBP27.61■■■□□ 2.01
SMPD1-204ENST00000530395 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
SMPD1-204ENST00000530395 NBPF26B4DH59 902 aa27.6■■■□□ 2.01
SMPD1-204ENST00000530395 NBPF10Q6P3W6 841 aaKnown RBP27.6■■■□□ 2.01
SMPD1-204ENST00000530395 NBPF5PQ86XG9 351 aaPredicted RBP27.6■■■□□ 2.01
SMPD1-204ENST00000530395 NBPF15Q8N660 670 aa27.6■■■□□ 2.01
SMPD1-204ENST00000530395 FER1L6Q2WGJ9 1857 aa27.57■■■□□ 2
SMPD1-204ENST00000530395 CNKSR1Q969H4 720 aa27.57■■■□□ 2
SMPD1-204ENST00000530395 STYK1Q6J9G0 422 aa27.56■■■□□ 2
SMPD1-204ENST00000530395 RBM46Q8TBY0 533 aaKnown RBP27.56■■■□□ 2
SMPD1-204ENST00000530395 THUMPD2Q9BTF0 503 aaKnown RBP27.56■■■□□ 2
SMPD1-204ENST00000530395 NIP7Q9Y221 180 aaKnown RBP eCLIP27.56■■■□□ 2
SMPD1-204ENST00000530395 NFKBIEO00221 500 aa27.55■■■□□ 2
SMPD1-204ENST00000530395 C21orf2O43822 256 aa27.55■■■□□ 2
SMPD1-204ENST00000530395 EIF4A1P60842 406 aaKnown RBP27.55■■■□□ 2
SMPD1-204ENST00000530395 DICER1Q9UPY3 1922 aaKnown RBP27.55■■■□□ 2
SMPD1-204ENST00000530395 SRGNP10124 158 aa27.54■■■□□ 2
SMPD1-204ENST00000530395 DDX10Q13206 875 aaKnown RBP27.54■■■□□ 2
SMPD1-204ENST00000530395 SLX4Q8IY92 1834 aa27.54■■■□□ 2
SMPD1-204ENST00000530395 MASTLQ96GX5 879 aa27.54■■■□□ 2
SMPD1-204ENST00000530395 ZNF219Q9P2Y4 722 aaPredicted RBP27.54■■■□□ 2
SMPD1-204ENST00000530395 APLP1P51693 650 aa27.53■■■□□ 2
SMPD1-204ENST00000530395 TPTE2Q6XPS3 522 aa27.53■■■□□ 2
SMPD1-204ENST00000530395 RRAGCQ9HB90 399 aa27.53■■■□□ 2
SMPD1-204ENST00000530395 NUP98P52948 1817 aa27.53■■■□□ 2
SMPD1-204ENST00000530395 MYBBP1AQ9BQG0 1328 aaKnown RBP27.52■■■□□ 2
SMPD1-204ENST00000530395 PRELPP51888 382 aa27.52■■■□□ 2
SMPD1-204ENST00000530395 SOGA3Q5TF21 947 aa27.51■■□□□ 1.99
SMPD1-204ENST00000530395 PRPF40BQ6NWY9 871 aaKnown RBP27.51■■□□□ 1.99
SMPD1-204ENST00000530395 RIPK4P57078 832 aa27.5■■□□□ 1.99
SMPD1-204ENST00000530395 LMOD3Q0VAK6 560 aa27.5■■□□□ 1.99
SMPD1-204ENST00000530395 KIF6Q6ZMV9 814 aa27.5■■□□□ 1.99
SMPD1-204ENST00000530395 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
SMPD1-204ENST00000530395 TSPYL4Q9UJ04 414 aa27.5■■□□□ 1.99
SMPD1-204ENST00000530395 GLTPD2A6NH11 291 aa27.49■■□□□ 1.99
SMPD1-204ENST00000530395 FSTL1Q12841 308 aa27.49■■□□□ 1.99
SMPD1-204ENST00000530395 HLFQ16534 295 aa27.49■■□□□ 1.99
SMPD1-204ENST00000530395 TAOK3Q9H2K8 898 aa27.49■■□□□ 1.99
SMPD1-204ENST00000530395 RRP7AQ9Y3A4 280 aaKnown RBP27.49■■□□□ 1.99
SMPD1-204ENST00000530395 LTBP3Q9NS15 1303 aa27.48■■□□□ 1.99
SMPD1-204ENST00000530395 FAM177BA6PVY3 158 aa27.48■■□□□ 1.99
SMPD1-204ENST00000530395 ERVV-1B6SEH8 477 aa27.48■■□□□ 1.99
SMPD1-204ENST00000530395 NPR1P16066 1061 aa27.48■■□□□ 1.99
SMPD1-204ENST00000530395 GTF2E1P29083 439 aaPredicted RBP27.48■■□□□ 1.99
SMPD1-204ENST00000530395 WDR90Q96KV7 1748 aa27.47■■□□□ 1.99
SMPD1-204ENST00000530395 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
SMPD1-204ENST00000530395 ERBB4Q15303 1308 aa27.46■■□□□ 1.99
SMPD1-204ENST00000530395 MYL6BP14649 208 aa27.46■■□□□ 1.99
SMPD1-204ENST00000530395 NYXQ9GZU5 481 aa27.46■■□□□ 1.99
SMPD1-204ENST00000530395 KLRG2A4D1S0 409 aaPredicted RBP27.45■■□□□ 1.98
SMPD1-204ENST00000530395 TMPOP42166 694 aaKnown RBP27.45■■□□□ 1.98
SMPD1-204ENST00000530395 ERFEQ4G0M1 354 aa27.45■■□□□ 1.98
SMPD1-204ENST00000530395 DPY19L2Q6NUT2 758 aa27.45■■□□□ 1.98
SMPD1-204ENST00000530395 BABAM1Q9NWV8 329 aa27.45■■□□□ 1.98
SMPD1-204ENST00000530395 VEGFAP15692 232 aaPredicted RBP27.44■■□□□ 1.98
SMPD1-204ENST00000530395 WDR43Q15061 677 aaKnown RBP eCLIP27.43■■□□□ 1.98
SMPD1-204ENST00000530395 TTLL7Q6ZT98 887 aa27.43■■□□□ 1.98
SMPD1-204ENST00000530395 SMC1BQ8NDV3 1235 aa27.43■■□□□ 1.98
SMPD1-204ENST00000530395 CCDC93Q567U6 631 aa27.42■■□□□ 1.98
SMPD1-204ENST00000530395 IBTKQ9P2D0 1353 aaPredicted RBP27.41■■□□□ 1.98
SMPD1-204ENST00000530395 ZBTB3Q9H5J0 574 aa27.41■■□□□ 1.98
SMPD1-204ENST00000530395 CCDC146Q8IYE0 955 aa27.4■■□□□ 1.98
SMPD1-204ENST00000530395 ALDH1B1P30837 517 aa27.39■■□□□ 1.98
SMPD1-204ENST00000530395 C7orf43Q8WVR3 580 aa27.39■■□□□ 1.98
SMPD1-204ENST00000530395 ABCC12Q96J65 1359 aa27.38■■□□□ 1.97
SMPD1-204ENST00000530395 EIF2S2P20042 333 aaKnown RBP27.38■■□□□ 1.97
SMPD1-204ENST00000530395 RUNDC1Q96C34 613 aa27.38■■□□□ 1.97
SMPD1-204ENST00000530395 GPTP24298 496 aa27.37■■□□□ 1.97
SMPD1-204ENST00000530395 NEUROD2Q15784 382 aa27.37■■□□□ 1.97
SMPD1-204ENST00000530395 RIC1Q4ADV7 1423 aa27.37■■□□□ 1.97
SMPD1-204ENST00000530395 NUTM1Q86Y26 1132 aa27.37■■□□□ 1.97
SMPD1-204ENST00000530395 GIGYF2Q6Y7W6 1299 aaKnown RBP27.36■■□□□ 1.97
SMPD1-204ENST00000530395 FKBP4Q02790 459 aaKnown RBP eCLIP27.35■■□□□ 1.97
SMPD1-204ENST00000530395 RTKN2Q8IZC4 609 aa27.35■■□□□ 1.97
SMPD1-204ENST00000530395 UBN2Q6ZU65 1347 aa27.35■■□□□ 1.97
SMPD1-204ENST00000530395 CRY2Q49AN0 593 aa27.34■■□□□ 1.97
SMPD1-204ENST00000530395 ZNF34Q8IZ26 560 aa27.34■■□□□ 1.97
SMPD1-204ENST00000530395 ANKRD36CQ5JPF3 1778 aa27.34■■□□□ 1.97
SMPD1-204ENST00000530395 DNAJC5GQ8N7S2 189 aa27.33■■□□□ 1.97
SMPD1-204ENST00000530395 RPGRQ92834 1020 aaKnown RBP27.33■■□□□ 1.97
SMPD1-204ENST00000530395 PDIA6Q15084 440 aa27.32■■□□□ 1.96
SMPD1-204ENST00000530395 PARP10Q53GL7 1025 aa27.32■■□□□ 1.96
SMPD1-204ENST00000530395 SUSD4Q5VX71 490 aa27.32■■□□□ 1.96
SMPD1-204ENST00000530395 PPP1R42Q7Z4L9 355 aa27.32■■□□□ 1.96
SMPD1-204ENST00000530395 LRP10Q7Z4F1 713 aa27.31■■□□□ 1.96
SMPD1-204ENST00000530395 ADAMTS8Q9UP79 889 aa27.31■■□□□ 1.96
SMPD1-204ENST00000530395 POTECB2RU33 542 aa27.3■■□□□ 1.96
SMPD1-204ENST00000530395 NTSR2O95665 410 aa27.3■■□□□ 1.96
SMPD1-204ENST00000530395 PROSER3Q2NL68 480 aa27.3■■□□□ 1.96
SMPD1-204ENST00000530395 PRKRIP1Q9H875 184 aaPredicted RBP27.3■■□□□ 1.96
SMPD1-204ENST00000530395 TRIM35Q9UPQ4 493 aa27.3■■□□□ 1.96
SMPD1-204ENST00000530395 LAS1LQ9Y4W2 734 aaKnown RBP27.3■■□□□ 1.96
SMPD1-204ENST00000530395 CHL1O00533 1208 aa27.29■■□□□ 1.96
SMPD1-204ENST00000530395 DDNO94850 711 aaPredicted RBP27.29■■□□□ 1.96
SMPD1-204ENST00000530395 ANXA1P04083 346 aa27.29■■□□□ 1.96
SMPD1-204ENST00000530395 OLFM4Q6UX06 510 aa27.29■■□□□ 1.96
SMPD1-204ENST00000530395 ZNF277Q9NRM2 450 aaPredicted RBP27.29■■□□□ 1.96
SMPD1-204ENST00000530395 SCN4AP35499 1836 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms