RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 GIMAP6Q6P9H5 292 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 SHTN1A0MZ66 631 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 MBIPQ9NS73 344 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 CCDC171Q6TFL3 1326 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 GOLGA6L9A6NEM1 432 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 ZNF397Q8NF99 534 aaPredicted RBP17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 TMOD2Q9NZR1 351 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 PTPRKQ15262 1439 aa17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 PYM1Q9BRP8 204 aaKnown RBP17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 IDI1Q13907 227 aa17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 TMC6Q7Z403 805 aa17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 PLCH2O75038 1416 aa17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 SHANK2Q9UPX8 1470 aa17.9■□□□□ 0.46
PCDHA4-203ENST00000530339 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.46
PCDHA4-203ENST00000530339 PRIM1P49642 420 aaKnown RBP17.89■□□□□ 0.46
PCDHA4-203ENST00000530339 MAP3K12Q12852 859 aa17.89■□□□□ 0.46
PCDHA4-203ENST00000530339 POTEB2H3BUK9 544 aa17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 GUCY1B3Q02153 619 aa17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 FAM200AQ8TCP9 573 aa17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 CTTNBP2Q8WZ74 1663 aa17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 GTF2F1P35269 517 aaKnown RBP eCLIP17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 TTF1Q15361 905 aaPredicted RBP17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 KRT222Q8N1A0 295 aa17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 CCDC8Q9H0W5 538 aaPredicted RBP17.89■□□□□ 0.45
PCDHA4-203ENST00000530339 ZNF830Q96NB3 372 aaPredicted RBP17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 TAF4BQ92750 862 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 TMOD3Q9NYL9 352 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 CFAP43Q8NDM7 1665 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 CAVIN4Q5BKX8 364 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 USP48Q86UV5 1035 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 MYD88Q99836 296 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 PIK3C2GO75747 1445 aa17.88■□□□□ 0.45
PCDHA4-203ENST00000530339 FGFR1OPO95684 399 aaKnown RBP17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 SPA17Q15506 151 aa17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 KLHL10Q6JEL2 608 aa17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 ANKRD18AQ8IVF6 992 aa17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 CNNM3Q8NE01 707 aa17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 ANKRD44Q8N8A2 993 aa17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 ZSCAN16Q9H4T2 348 aaPredicted RBP17.87■□□□□ 0.45
PCDHA4-203ENST00000530339 SLC5A1P13866 664 aa17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 RBM5P52756 815 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 FAM107BQ9H098 131 aa17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 NAPBQ9H115 298 aa17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 SEC24BO95487 1268 aa17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 PDE1AP54750 535 aa17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 ZHX3Q9H4I2 956 aa17.86■□□□□ 0.45
PCDHA4-203ENST00000530339 TSHZ3Q63HK5 1081 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 CCDC186Q7Z3E2 898 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 KIF20AO95235 890 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 ESYT1Q9BSJ8 1104 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 RAB34Q9BZG1 259 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 CNPY2Q9Y2B0 182 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 PPP1R12BO60237 982 aaPredicted RBP17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 ZNF213O14771 459 aa17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 ZRSR2Q15696 482 aaKnown RBP17.85■□□□□ 0.45
PCDHA4-203ENST00000530339 TAX1BP1Q86VP1 789 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 PAF1Q8N7H5 531 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 TTC12Q9H892 705 aaPredicted RBP17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 BIN1O00499 593 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 NEFHP12036 1026 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 SEC63Q9UGP8 760 aaKnown RBP17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 RLBP1P12271 317 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 CCT2P78371 535 aaKnown RBP17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 PPP1R42Q7Z4L9 355 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 TIGD1Q96MW7 591 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
PCDHA4-203ENST00000530339 ANKRD18BA2A2Z9 1011 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 SKILP12757 684 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 KANK3Q6NY19 840 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 SLF2Q8IX21 1173 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 PLCD4Q9BRC7 762 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 FKBP15Q5T1M5 1219 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 NEK1Q96PY6 1258 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 ATP2B2Q01814 1243 aa17.83■□□□□ 0.44
PCDHA4-203ENST00000530339 ZC3H6P61129 1189 aaKnown RBP17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 ANO6Q4KMQ2 910 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 SMARCC1Q92922 1105 aaPredicted RBP17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 TSG101Q99816 390 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 SLC12A7Q9Y666 1083 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 MEIS3Q99687 375 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 YEATS4O95619 227 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 SSRP1Q08945 709 aaKnown RBP17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 F13A1P00488 732 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 IFNL2Q8IZJ0 200 aa17.82■□□□□ 0.44
PCDHA4-203ENST00000530339 RRAGDQ9NQL2 400 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms