RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ANO8Q9HCE9 1232 aaPredicted RBP18.21■□□□□ 0.51
TTC39A-216ENST00000530004 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
TTC39A-216ENST00000530004 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
TTC39A-216ENST00000530004 CENPQQ7L2Z9 268 aaPredicted RBP18.2■□□□□ 0.5
TTC39A-216ENST00000530004 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
TTC39A-216ENST00000530004 FLIIQ13045 1269 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 SLC15A2Q16348 729 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 NPM2Q86SE8 214 aaKnown RBP18.19■□□□□ 0.5
TTC39A-216ENST00000530004 XAGE3Q8WTP9 111 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 ZBTB40Q9NUA8 1239 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 STK32BQ9NY57 414 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
TTC39A-216ENST00000530004 COL15A1P39059 1388 aa18.18■□□□□ 0.5
TTC39A-216ENST00000530004 SSFA2P28290 1259 aa18.18■□□□□ 0.5
TTC39A-216ENST00000530004 AIMP1Q12904 312 aaKnown RBP18.18■□□□□ 0.5
TTC39A-216ENST00000530004 PHF14O94880 888 aa18.17■□□□□ 0.5
TTC39A-216ENST00000530004 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
TTC39A-216ENST00000530004 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
TTC39A-216ENST00000530004 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
TTC39A-216ENST00000530004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.17■□□□□ 0.5
TTC39A-216ENST00000530004 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
TTC39A-216ENST00000530004 IGHDP01880 384 aa18.17■□□□□ 0.5
TTC39A-216ENST00000530004 ADRA2BP18089 450 aa18.17■□□□□ 0.5
TTC39A-216ENST00000530004 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
TTC39A-216ENST00000530004 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
TTC39A-216ENST00000530004 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
TTC39A-216ENST00000530004 CACNA1FO60840 1977 aa18.15■□□□□ 0.5
TTC39A-216ENST00000530004 A0A087WZG4 1122 aa18.15■□□□□ 0.5
TTC39A-216ENST00000530004 F6X3S4 739 aa18.15■□□□□ 0.5
TTC39A-216ENST00000530004 DZIP3Q86Y13 1208 aaKnown RBP18.15■□□□□ 0.5
TTC39A-216ENST00000530004 ARXQ96QS3 562 aa18.15■□□□□ 0.5
TTC39A-216ENST00000530004 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
TTC39A-216ENST00000530004 SLC4A10Q6U841 1118 aa18.14■□□□□ 0.5
TTC39A-216ENST00000530004 DDX58O95786 925 aaKnown RBP18.14■□□□□ 0.49
TTC39A-216ENST00000530004 KIF6Q6ZMV9 814 aa18.14■□□□□ 0.49
TTC39A-216ENST00000530004 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.49
TTC39A-216ENST00000530004 FLAD1Q8NFF5 587 aa18.14■□□□□ 0.49
TTC39A-216ENST00000530004 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
TTC39A-216ENST00000530004 UBR3Q6ZT12 1888 aa18.14■□□□□ 0.49
TTC39A-216ENST00000530004 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
TTC39A-216ENST00000530004 MAP3K15Q6ZN16 1313 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 PI4KAP2A4QPH2 592 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 SOCS7O14512 581 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 RFC4P35249 363 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 CCT4P50991 539 aaKnown RBP18.12■□□□□ 0.49
TTC39A-216ENST00000530004 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
TTC39A-216ENST00000530004 PI4KAP1Q8N8J0 262 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 RWDD1Q9H446 243 aaPredicted RBP18.12■□□□□ 0.49
TTC39A-216ENST00000530004 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 RIC3Q7Z5B4 369 aa18.12■□□□□ 0.49
TTC39A-216ENST00000530004 ADCY9O60503 1353 aa18.11■□□□□ 0.49
TTC39A-216ENST00000530004 ERVV-1B6SEH8 477 aa18.11■□□□□ 0.49
TTC39A-216ENST00000530004 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
TTC39A-216ENST00000530004 ZPR1O75312 459 aa18.1■□□□□ 0.49
TTC39A-216ENST00000530004 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
TTC39A-216ENST00000530004 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
TTC39A-216ENST00000530004 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
TTC39A-216ENST00000530004 HLFQ16534 295 aa18.09■□□□□ 0.49
TTC39A-216ENST00000530004 USPL1Q5W0Q7 1092 aa18.09■□□□□ 0.49
TTC39A-216ENST00000530004 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
TTC39A-216ENST00000530004 HDAC1Q13547 482 aaPredicted RBP18.09■□□□□ 0.49
TTC39A-216ENST00000530004 GIGYF2Q6Y7W6 1299 aaKnown RBP18.09■□□□□ 0.49
TTC39A-216ENST00000530004 DNAAF4Q8WXU2 420 aa18.09■□□□□ 0.49
TTC39A-216ENST00000530004 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
TTC39A-216ENST00000530004 TUBGCP6Q96RT7 1819 aa18.08■□□□□ 0.49
TTC39A-216ENST00000530004 RGL2O15211 777 aa18.08■□□□□ 0.48
TTC39A-216ENST00000530004 MSH5O43196 834 aa18.08■□□□□ 0.48
TTC39A-216ENST00000530004 C4AP0C0L4 1744 aa18.07■□□□□ 0.48
TTC39A-216ENST00000530004 R3HDM1Q15032 1099 aaKnown RBP18.07■□□□□ 0.48
TTC39A-216ENST00000530004 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
TTC39A-216ENST00000530004 SKAP1Q86WV1 359 aa18.07■□□□□ 0.48
TTC39A-216ENST00000530004 MEIS3Q99687 375 aa18.07■□□□□ 0.48
TTC39A-216ENST00000530004 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
TTC39A-216ENST00000530004 GYS1P13807 737 aa18.07■□□□□ 0.48
TTC39A-216ENST00000530004 ZNF652Q9Y2D9 606 aa18.07■□□□□ 0.48
TTC39A-216ENST00000530004 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
TTC39A-216ENST00000530004 QSER1Q2KHR3 1735 aa18.06■□□□□ 0.48
TTC39A-216ENST00000530004 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
TTC39A-216ENST00000530004 TCIRG1Q13488 830 aa18.05■□□□□ 0.48
TTC39A-216ENST00000530004 HSP90AB3PQ58FF7 597 aa18.05■□□□□ 0.48
TTC39A-216ENST00000530004 MYD88Q99836 296 aa18.05■□□□□ 0.48
TTC39A-216ENST00000530004 NEXNQ0ZGT2 675 aa18.04■□□□□ 0.48
TTC39A-216ENST00000530004 BEND3Q5T5X7 828 aa18.04■□□□□ 0.48
TTC39A-216ENST00000530004 SCN7AQ01118 1682 aa18.04■□□□□ 0.48
TTC39A-216ENST00000530004 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 BCORQ6W2J9 1755 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
TTC39A-216ENST00000530004 ATP5J2-PTCD1G3V325 749 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 ZNF34Q8IZ26 560 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 LINS1Q8NG48 757 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 SRCIN1Q9C0H9 1055 aa18.03■□□□□ 0.48
TTC39A-216ENST00000530004 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms