RNA–Protein interactions for RNA: ENST00000529999.5

PUF60-215, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-215ENST00000529999 BRCA1P38398 1863 aaKnown RBP18.61■□□□□ 0.57
PUF60-215ENST00000529999 LAMB4A4D0S4 1761 aa18.61■□□□□ 0.57
PUF60-215ENST00000529999 HEG1Q9ULI3 1381 aa18.61■□□□□ 0.57
PUF60-215ENST00000529999 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
PUF60-215ENST00000529999 HTRA3P83110 453 aa18.61■□□□□ 0.57
PUF60-215ENST00000529999 NFIXQ14938 502 aa18.61■□□□□ 0.57
PUF60-215ENST00000529999 KLRG1Q96E93 195 aa18.61■□□□□ 0.57
PUF60-215ENST00000529999 ARFGEF1Q9Y6D6 1849 aa18.6■□□□□ 0.57
PUF60-215ENST00000529999 SERPINB2P05120 415 aa18.6■□□□□ 0.57
PUF60-215ENST00000529999 EIF4A1P60842 406 aaKnown RBP18.6■□□□□ 0.57
PUF60-215ENST00000529999 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
PUF60-215ENST00000529999 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
PUF60-215ENST00000529999 VSIG10Q8N0Z9 540 aa18.59■□□□□ 0.57
PUF60-215ENST00000529999 SMC1BQ8NDV3 1235 aa18.59■□□□□ 0.57
PUF60-215ENST00000529999 ZBTB1Q9Y2K1 713 aa18.59■□□□□ 0.57
PUF60-215ENST00000529999 TJP1Q07157 1748 aa18.58■□□□□ 0.57
PUF60-215ENST00000529999 LMNB1P20700 586 aa18.58■□□□□ 0.56
PUF60-215ENST00000529999 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.56
PUF60-215ENST00000529999 RASSF7Q02833 373 aa18.58■□□□□ 0.56
PUF60-215ENST00000529999 TTLL6Q8N841 843 aa18.58■□□□□ 0.56
PUF60-215ENST00000529999 COL15A1P39059 1388 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 ZC3H4Q9UPT8 1303 aaKnown RBP18.57■□□□□ 0.56
PUF60-215ENST00000529999 H0YIN7 160 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 KCNQ3O43525 872 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 STARD3NLO95772 234 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 HOXB7P09629 217 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 C2CD5Q86YS7 1000 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
PUF60-215ENST00000529999 VEGFAP15692 232 aaPredicted RBP18.56■□□□□ 0.56
PUF60-215ENST00000529999 BICDL1Q6ZP65 573 aa18.56■□□□□ 0.56
PUF60-215ENST00000529999 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
PUF60-215ENST00000529999 ZNF428Q96B54 188 aa18.56■□□□□ 0.56
PUF60-215ENST00000529999 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
PUF60-215ENST00000529999 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
PUF60-215ENST00000529999 JMYQ8N9B5 988 aa18.55■□□□□ 0.56
PUF60-215ENST00000529999 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
PUF60-215ENST00000529999 A0A087WZG4 1122 aa18.54■□□□□ 0.56
PUF60-215ENST00000529999 VAMP4O75379 141 aa18.54■□□□□ 0.56
PUF60-215ENST00000529999 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
PUF60-215ENST00000529999 TSPYL6Q8N831 410 aa18.54■□□□□ 0.56
PUF60-215ENST00000529999 ZNF496Q96IT1 587 aaPredicted RBP18.54■□□□□ 0.56
PUF60-215ENST00000529999 KRT24Q2M2I5 525 aa18.53■□□□□ 0.56
PUF60-215ENST00000529999 WDR90Q96KV7 1748 aa18.53■□□□□ 0.56
PUF60-215ENST00000529999 DPY19L2Q6NUT2 758 aa18.52■□□□□ 0.56
PUF60-215ENST00000529999 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.56
PUF60-215ENST00000529999 TEX13AQ9BXU3 409 aaPredicted RBP18.52■□□□□ 0.56
PUF60-215ENST00000529999 CHMP4AQ9BY43 222 aa18.52■□□□□ 0.56
PUF60-215ENST00000529999 SNRPA1P09661 255 aaKnown RBP18.51■□□□□ 0.55
PUF60-215ENST00000529999 EIF5P55010 431 aaKnown RBP18.51■□□□□ 0.55
PUF60-215ENST00000529999 COL13A1Q5TAT6 717 aaPredicted RBP18.51■□□□□ 0.55
PUF60-215ENST00000529999 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
PUF60-215ENST00000529999 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
PUF60-215ENST00000529999 ZNF330Q9Y3S2 320 aaPredicted RBP18.51■□□□□ 0.55
PUF60-215ENST00000529999 SBF1O95248 1867 aa18.5■□□□□ 0.55
PUF60-215ENST00000529999 PDE6BP35913 854 aa18.5■□□□□ 0.55
PUF60-215ENST00000529999 PRELPP51888 382 aa18.5■□□□□ 0.55
PUF60-215ENST00000529999 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
PUF60-215ENST00000529999 NFKBIEO00221 500 aa18.49■□□□□ 0.55
PUF60-215ENST00000529999 ELL2O00472 640 aaPredicted RBP18.49■□□□□ 0.55
PUF60-215ENST00000529999 NPHP1O15259 732 aa18.49■□□□□ 0.55
PUF60-215ENST00000529999 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
PUF60-215ENST00000529999 BRIP1Q9BX63 1249 aa18.49■□□□□ 0.55
PUF60-215ENST00000529999 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
PUF60-215ENST00000529999 RCAN3Q9UKA8 241 aa18.49■□□□□ 0.55
PUF60-215ENST00000529999 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
PUF60-215ENST00000529999 RARSP54136 660 aaKnown RBP18.48■□□□□ 0.55
PUF60-215ENST00000529999 TBC1D2BQ9UPU7 963 aa18.48■□□□□ 0.55
PUF60-215ENST00000529999 AFDNP55196 1824 aaKnown RBP18.47■□□□□ 0.55
PUF60-215ENST00000529999 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
PUF60-215ENST00000529999 C21orf2O43822 256 aa18.47■□□□□ 0.55
PUF60-215ENST00000529999 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
PUF60-215ENST00000529999 IL6STP40189 918 aaPredicted RBP18.46■□□□□ 0.55
PUF60-215ENST00000529999 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
PUF60-215ENST00000529999 CCDC30Q5VVM6 783 aa18.46■□□□□ 0.55
PUF60-215ENST00000529999 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
PUF60-215ENST00000529999 SETDB2Q96T68 719 aa18.46■□□□□ 0.55
PUF60-215ENST00000529999 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
PUF60-215ENST00000529999 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
PUF60-215ENST00000529999 TNS4Q8IZW8 715 aa18.45■□□□□ 0.54
PUF60-215ENST00000529999 USP16Q9Y5T5 823 aa18.45■□□□□ 0.54
PUF60-215ENST00000529999 NRXN2Q9P2S2 1712 aa18.45■□□□□ 0.54
PUF60-215ENST00000529999 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
PUF60-215ENST00000529999 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
PUF60-215ENST00000529999 SSH1Q8WYL5 1049 aa18.44■□□□□ 0.54
PUF60-215ENST00000529999 POTECB2RU33 542 aa18.43■□□□□ 0.54
PUF60-215ENST00000529999 CAPN15O75808 1086 aa18.43■□□□□ 0.54
PUF60-215ENST00000529999 A1BGP04217 495 aa18.43■□□□□ 0.54
PUF60-215ENST00000529999 CNBD1Q8NA66 436 aa18.43■□□□□ 0.54
PUF60-215ENST00000529999 CNKSR1Q969H4 720 aa18.43■□□□□ 0.54
PUF60-215ENST00000529999 ST5P78524 1137 aa18.42■□□□□ 0.54
PUF60-215ENST00000529999 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
PUF60-215ENST00000529999 TAOK3Q9H2K8 898 aa18.42■□□□□ 0.54
PUF60-215ENST00000529999 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
PUF60-215ENST00000529999 HSPA1AP0DMV8 641 aaKnown RBP18.41■□□□□ 0.54
PUF60-215ENST00000529999 HSPA1BP0DMV9 641 aaKnown RBP18.41■□□□□ 0.54
PUF60-215ENST00000529999 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
PUF60-215ENST00000529999 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
PUF60-215ENST00000529999 DBF4Q9UBU7 674 aaPredicted RBP18.41■□□□□ 0.54
PUF60-215ENST00000529999 BCAR3O75815 825 aa18.4■□□□□ 0.54
PUF60-215ENST00000529999 CAMTA2O94983 1202 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms