RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ZNF652Q9Y2D9 606 aa16.43■□□□□ 0.22
CCDC90B-216ENST00000529856 C10orf71Q711Q0 1435 aa16.43■□□□□ 0.22
CCDC90B-216ENST00000529856 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 ANXA1P04083 346 aa16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 TGFB2P61812 414 aa16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 HLFQ16534 295 aa16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 SETDB2Q96T68 719 aa16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 MAP3K15Q6ZN16 1313 aa16.42■□□□□ 0.22
CCDC90B-216ENST00000529856 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
CCDC90B-216ENST00000529856 TSPYL6Q8N831 410 aa16.41■□□□□ 0.22
CCDC90B-216ENST00000529856 CHPF2Q9P2E5 772 aa16.41■□□□□ 0.22
CCDC90B-216ENST00000529856 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
CCDC90B-216ENST00000529856 NRXN2Q9P2S2 1712 aa16.41■□□□□ 0.22
CCDC90B-216ENST00000529856 CARMIL3Q8ND23 1372 aa16.4■□□□□ 0.22
CCDC90B-216ENST00000529856 GPR162Q16538 588 aa16.4■□□□□ 0.22
CCDC90B-216ENST00000529856 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
CCDC90B-216ENST00000529856 ZNF521Q96K83 1311 aa16.4■□□□□ 0.22
CCDC90B-216ENST00000529856 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
CCDC90B-216ENST00000529856 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
CCDC90B-216ENST00000529856 CHMP4AQ9BY43 222 aa16.39■□□□□ 0.21
CCDC90B-216ENST00000529856 ZBTB3Q9H5J0 574 aa16.39■□□□□ 0.21
CCDC90B-216ENST00000529856 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-216ENST00000529856 NIP7Q9Y221 180 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCDC90B-216ENST00000529856 NUP98P52948 1817 aa16.38■□□□□ 0.21
CCDC90B-216ENST00000529856 PXDNLA1KZ92 1463 aa16.38■□□□□ 0.21
CCDC90B-216ENST00000529856 DPEP1P16444 411 aa16.38■□□□□ 0.21
CCDC90B-216ENST00000529856 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
CCDC90B-216ENST00000529856 HYPKQ9NX55 129 aa16.38■□□□□ 0.21
CCDC90B-216ENST00000529856 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
CCDC90B-216ENST00000529856 KIAA1551Q9HCM1 1747 aa16.37■□□□□ 0.21
CCDC90B-216ENST00000529856 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
CCDC90B-216ENST00000529856 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-216ENST00000529856 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
CCDC90B-216ENST00000529856 PELP1Q8IZL8 1130 aaKnown RBP16.37■□□□□ 0.21
CCDC90B-216ENST00000529856 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 YBX3P16989 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 KCNA3P22001 575 aa16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
CCDC90B-216ENST00000529856 TPTE2Q6XPS3 522 aa16.35■□□□□ 0.21
CCDC90B-216ENST00000529856 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
CCDC90B-216ENST00000529856 ZNF34Q8IZ26 560 aa16.35■□□□□ 0.21
CCDC90B-216ENST00000529856 CNBD1Q8NA66 436 aa16.35■□□□□ 0.21
CCDC90B-216ENST00000529856 BRIP1Q9BX63 1249 aa16.35■□□□□ 0.21
CCDC90B-216ENST00000529856 VAMP4O75379 141 aa16.34■□□□□ 0.21
CCDC90B-216ENST00000529856 CHRNA5P30532 468 aa16.34■□□□□ 0.21
CCDC90B-216ENST00000529856 EXOSC9Q06265 439 aaKnown RBP16.34■□□□□ 0.21
CCDC90B-216ENST00000529856 ANKRD13DQ6ZTN6 518 aa16.34■□□□□ 0.21
CCDC90B-216ENST00000529856 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
CCDC90B-216ENST00000529856 WWC3Q9ULE0 1092 aa16.34■□□□□ 0.21
CCDC90B-216ENST00000529856 NPHP1O15259 732 aa16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 GPTP24298 496 aa16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 ST5P78524 1137 aa16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
CCDC90B-216ENST00000529856 FAM177BA6PVY3 158 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 PDE6BP35913 854 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 UBN2Q6ZU65 1347 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 ANKRD31Q8N7Z5 1873 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 NYXQ9GZU5 481 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
CCDC90B-216ENST00000529856 GOLGB1Q14789 3259 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-216ENST00000529856 H0YIN7 160 aa16.31■□□□□ 0.2
CCDC90B-216ENST00000529856 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
CCDC90B-216ENST00000529856 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
CCDC90B-216ENST00000529856 STK31Q9BXU1 1019 aa16.31■□□□□ 0.2
CCDC90B-216ENST00000529856 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
CCDC90B-216ENST00000529856 E9PSI1 815 aa16.3■□□□□ 0.2
CCDC90B-216ENST00000529856 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
CCDC90B-216ENST00000529856 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
CCDC90B-216ENST00000529856 SLFN5Q08AF3 891 aa16.3■□□□□ 0.2
CCDC90B-216ENST00000529856 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
CCDC90B-216ENST00000529856 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
CCDC90B-216ENST00000529856 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
CCDC90B-216ENST00000529856 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
CCDC90B-216ENST00000529856 DALRD3Q5D0E6 543 aaKnown RBP16.29■□□□□ 0.2
CCDC90B-216ENST00000529856 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
CCDC90B-216ENST00000529856 KLRG2A4D1S0 409 aaPredicted RBP16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 NTSR2O95665 410 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 ERFEQ4G0M1 354 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 CDCA7LQ96GN5 454 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 ISCA1Q9BUE6 129 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 UTRNP46939 3433 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
CCDC90B-216ENST00000529856 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
CCDC90B-216ENST00000529856 SRGNP10124 158 aa16.27■□□□□ 0.2
CCDC90B-216ENST00000529856 G2E3Q7L622 706 aa16.27■□□□□ 0.2
CCDC90B-216ENST00000529856 TRMT2AQ8IZ69 625 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms