RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 KDM3BQ7LBC6 1761 aa27.4■■□□□ 1.98
SF3B2-207ENST00000529577 SRGNP10124 158 aa27.39■■□□□ 1.98
SF3B2-207ENST00000529577 PDE6BP35913 854 aa27.38■■□□□ 1.97
SF3B2-207ENST00000529577 C16orf71Q8IYS4 520 aaPredicted RBP27.38■■□□□ 1.97
SF3B2-207ENST00000529577 SETDB2Q96T68 719 aa27.38■■□□□ 1.97
SF3B2-207ENST00000529577 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
SF3B2-207ENST00000529577 LAMB4A4D0S4 1761 aa27.37■■□□□ 1.97
SF3B2-207ENST00000529577 SNRPA1P09661 255 aaKnown RBP27.37■■□□□ 1.97
SF3B2-207ENST00000529577 CNBD1Q8NA66 436 aa27.37■■□□□ 1.97
SF3B2-207ENST00000529577 C7orf43Q8WVR3 580 aa27.36■■□□□ 1.97
SF3B2-207ENST00000529577 PLEKHF1Q96S99 279 aa27.35■■□□□ 1.97
SF3B2-207ENST00000529577 HLFQ16534 295 aa27.34■■□□□ 1.97
SF3B2-207ENST00000529577 PRPF40BQ6NWY9 871 aaKnown RBP27.34■■□□□ 1.97
SF3B2-207ENST00000529577 KLRG1Q96E93 195 aa27.34■■□□□ 1.97
SF3B2-207ENST00000529577 HTATSF1O43719 755 aaKnown RBP27.33■■□□□ 1.97
SF3B2-207ENST00000529577 STYK1Q6J9G0 422 aa27.33■■□□□ 1.97
SF3B2-207ENST00000529577 JMYQ8N9B5 988 aa27.33■■□□□ 1.97
SF3B2-207ENST00000529577 VEGFAP15692 232 aaPredicted RBP27.32■■□□□ 1.96
SF3B2-207ENST00000529577 OLFM4Q6UX06 510 aa27.32■■□□□ 1.96
SF3B2-207ENST00000529577 SMC1BQ8NDV3 1235 aa27.32■■□□□ 1.96
SF3B2-207ENST00000529577 RTF1Q92541 710 aaKnown RBP27.32■■□□□ 1.96
SF3B2-207ENST00000529577 PDZRN3Q9UPQ7 1066 aa27.32■■□□□ 1.96
SF3B2-207ENST00000529577 LTBP3Q9NS15 1303 aa27.32■■□□□ 1.96
SF3B2-207ENST00000529577 KLRG2A4D1S0 409 aaPredicted RBP27.31■■□□□ 1.96
SF3B2-207ENST00000529577 TAF7Q15545 349 aaPredicted RBP27.31■■□□□ 1.96
SF3B2-207ENST00000529577 CLEC4GQ6UXB4 293 aa27.31■■□□□ 1.96
SF3B2-207ENST00000529577 THUMPD2Q9BTF0 503 aaKnown RBP27.31■■□□□ 1.96
SF3B2-207ENST00000529577 MASTLQ96GX5 879 aa27.3■■□□□ 1.96
SF3B2-207ENST00000529577 POTEIP0CG38 1075 aa27.29■■□□□ 1.96
SF3B2-207ENST00000529577 POTEJP0CG39 1038 aa27.29■■□□□ 1.96
SF3B2-207ENST00000529577 ERFEQ4G0M1 354 aa27.29■■□□□ 1.96
SF3B2-207ENST00000529577 ST5P78524 1137 aa27.28■■□□□ 1.96
SF3B2-207ENST00000529577 CNKSR1Q969H4 720 aa27.28■■□□□ 1.96
SF3B2-207ENST00000529577 NUP98P52948 1817 aa27.27■■□□□ 1.96
SF3B2-207ENST00000529577 SNED1Q8TER0 1413 aa27.27■■□□□ 1.96
SF3B2-207ENST00000529577 SLC51AQ86UW1 340 aa27.27■■□□□ 1.96
SF3B2-207ENST00000529577 NBPF5PQ86XG9 351 aaPredicted RBP27.27■■□□□ 1.96
SF3B2-207ENST00000529577 TAOK3Q9H2K8 898 aa27.27■■□□□ 1.96
SF3B2-207ENST00000529577 DDNO94850 711 aaPredicted RBP27.26■■□□□ 1.95
SF3B2-207ENST00000529577 NIP7Q9Y221 180 aaKnown RBP eCLIP27.26■■□□□ 1.95
SF3B2-207ENST00000529577 ABCC12Q96J65 1359 aa27.25■■□□□ 1.95
SF3B2-207ENST00000529577 FAM177BA6PVY3 158 aa27.25■■□□□ 1.95
SF3B2-207ENST00000529577 EIF4A1P60842 406 aaKnown RBP27.24■■□□□ 1.95
SF3B2-207ENST00000529577 TTLL7Q6ZT98 887 aa27.23■■□□□ 1.95
SF3B2-207ENST00000529577 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
SF3B2-207ENST00000529577 RGL2O15211 777 aa27.22■■□□□ 1.95
SF3B2-207ENST00000529577 COL4A5P29400 1685 aa27.21■■□□□ 1.95
SF3B2-207ENST00000529577 NPR1P16066 1061 aa27.21■■□□□ 1.95
SF3B2-207ENST00000529577 NFE2L2Q16236 605 aa27.21■■□□□ 1.95
SF3B2-207ENST00000529577 ZNF652Q9Y2D9 606 aa27.21■■□□□ 1.95
SF3B2-207ENST00000529577 NPHP1O15259 732 aa27.2■■□□□ 1.94
SF3B2-207ENST00000529577 COL13A1Q5TAT6 717 aaPredicted RBP27.2■■□□□ 1.94
SF3B2-207ENST00000529577 NGEFQ8N5V2 710 aa27.2■■□□□ 1.94
SF3B2-207ENST00000529577 UBN2Q6ZU65 1347 aa27.19■■□□□ 1.94
SF3B2-207ENST00000529577 ZNF541Q9H0D2 1346 aa27.19■■□□□ 1.94
SF3B2-207ENST00000529577 DPY19L2Q6NUT2 758 aa27.19■■□□□ 1.94
SF3B2-207ENST00000529577 TPTE2Q6XPS3 522 aa27.19■■□□□ 1.94
SF3B2-207ENST00000529577 LRP10Q7Z4F1 713 aa27.19■■□□□ 1.94
SF3B2-207ENST00000529577 NUTM1Q86Y26 1132 aa27.18■■□□□ 1.94
SF3B2-207ENST00000529577 ZNF277Q9NRM2 450 aaPredicted RBP27.18■■□□□ 1.94
SF3B2-207ENST00000529577 CCDC93Q567U6 631 aa27.17■■□□□ 1.94
SF3B2-207ENST00000529577 MAP3K15Q6ZN16 1313 aa27.16■■□□□ 1.94
SF3B2-207ENST00000529577 FKBP4Q02790 459 aaKnown RBP eCLIP27.16■■□□□ 1.94
SF3B2-207ENST00000529577 CRY2Q49AN0 593 aa27.16■■□□□ 1.94
SF3B2-207ENST00000529577 RRP7AQ9Y3A4 280 aaKnown RBP27.16■■□□□ 1.94
SF3B2-207ENST00000529577 ADAMTSL1Q8N6G6 1762 aa27.16■■□□□ 1.94
SF3B2-207ENST00000529577 C3orf67Q6ZVT6 689 aa27.15■■□□□ 1.94
SF3B2-207ENST00000529577 SCN4AP35499 1836 aa27.14■■□□□ 1.94
SF3B2-207ENST00000529577 ERVV-1B6SEH8 477 aa27.14■■□□□ 1.94
SF3B2-207ENST00000529577 MYL6BP14649 208 aa27.14■■□□□ 1.94
SF3B2-207ENST00000529577 PDIA6Q15084 440 aa27.14■■□□□ 1.94
SF3B2-207ENST00000529577 SOGA3Q5TF21 947 aa27.14■■□□□ 1.94
SF3B2-207ENST00000529577 L3MBTL3Q96JM7 780 aaPredicted RBP27.14■■□□□ 1.94
SF3B2-207ENST00000529577 SUSD4Q5VX71 490 aa27.13■■□□□ 1.93
SF3B2-207ENST00000529577 PNISRQ8TF01 805 aaKnown RBP27.13■■□□□ 1.93
SF3B2-207ENST00000529577 ZBTB3Q9H5J0 574 aa27.13■■□□□ 1.93
SF3B2-207ENST00000529577 GPTP24298 496 aa27.12■■□□□ 1.93
SF3B2-207ENST00000529577 CHADLQ6NUI6 762 aa27.12■■□□□ 1.93
SF3B2-207ENST00000529577 LTBP1Q14766 1721 aa27.11■■□□□ 1.93
SF3B2-207ENST00000529577 PROSER3Q2NL68 480 aa27.11■■□□□ 1.93
SF3B2-207ENST00000529577 ZNF34Q8IZ26 560 aa27.11■■□□□ 1.93
SF3B2-207ENST00000529577 TAF1DQ9H5J8 278 aaPredicted RBP27.11■■□□□ 1.93
SF3B2-207ENST00000529577 SYNE4Q8N205 404 aa27.1■■□□□ 1.93
SF3B2-207ENST00000529577 PASKQ96RG2 1323 aa27.1■■□□□ 1.93
SF3B2-207ENST00000529577 RIC1Q4ADV7 1423 aa27.09■■□□□ 1.93
SF3B2-207ENST00000529577 NTSR2O95665 410 aa27.09■■□□□ 1.93
SF3B2-207ENST00000529577 ANXA1P04083 346 aa27.08■■□□□ 1.93
SF3B2-207ENST00000529577 IBTKQ9P2D0 1353 aaPredicted RBP27.08■■□□□ 1.93
SF3B2-207ENST00000529577 FZD9O00144 591 aa27.07■■□□□ 1.92
SF3B2-207ENST00000529577 HOXA10P31260 410 aaPredicted RBP27.07■■□□□ 1.92
SF3B2-207ENST00000529577 IARSP41252 1262 aaKnown RBP27.07■■□□□ 1.92
SF3B2-207ENST00000529577 ITGBL1O95965 494 aaPredicted RBP27.06■■□□□ 1.92
SF3B2-207ENST00000529577 HSPA1AP0DMV8 641 aaKnown RBP27.06■■□□□ 1.92
SF3B2-207ENST00000529577 HSPA1BP0DMV9 641 aaKnown RBP27.06■■□□□ 1.92
SF3B2-207ENST00000529577 RTKN2Q8IZC4 609 aa27.06■■□□□ 1.92
SF3B2-207ENST00000529577 LAMB2P55268 1798 aa27.05■■□□□ 1.92
SF3B2-207ENST00000529577 ALDH1B1P30837 517 aa27.05■■□□□ 1.92
SF3B2-207ENST00000529577 GIGYF2Q6Y7W6 1299 aaKnown RBP27.05■■□□□ 1.92
SF3B2-207ENST00000529577 KIF6Q6ZMV9 814 aa27.04■■□□□ 1.92
SF3B2-207ENST00000529577 NYXQ9GZU5 481 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms