RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 NRXN2Q9P2S2 1712 aa20.94■□□□□ 0.94
TSPAN4-218ENST00000529566 HDGFL1Q5TGJ6 251 aa20.93■□□□□ 0.94
TSPAN4-218ENST00000529566 DDX21Q9NR30 783 aaKnown RBP eCLIP20.93■□□□□ 0.94
TSPAN4-218ENST00000529566 MAP3K15Q6ZN16 1313 aa20.93■□□□□ 0.94
TSPAN4-218ENST00000529566 ZNF521Q96K83 1311 aa20.93■□□□□ 0.94
TSPAN4-218ENST00000529566 PXDNLA1KZ92 1463 aa20.93■□□□□ 0.94
TSPAN4-218ENST00000529566 KIAA1551Q9HCM1 1747 aa20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 TSPYL6Q8N831 410 aa20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 SETDB2Q96T68 719 aa20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 SPINK5Q9NQ38 1064 aaPredicted RBP20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 CHPF2Q9P2E5 772 aa20.92■□□□□ 0.94
TSPAN4-218ENST00000529566 A0A0G2JLW4 131 aa20.91■□□□□ 0.94
TSPAN4-218ENST00000529566 YBX3P16989 372 aaKnown RBP eCLIP20.91■□□□□ 0.94
TSPAN4-218ENST00000529566 KCNA3P22001 575 aa20.91■□□□□ 0.94
TSPAN4-218ENST00000529566 CARMIL3Q8ND23 1372 aa20.91■□□□□ 0.94
TSPAN4-218ENST00000529566 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
TSPAN4-218ENST00000529566 DPEP1P16444 411 aa20.9■□□□□ 0.94
TSPAN4-218ENST00000529566 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 GPR162Q16538 588 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 KIF6Q6ZMV9 814 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 COPS6Q7L5N1 327 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 XAGE3Q8WTP9 111 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 ZBTB3Q9H5J0 574 aa20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 DBF4Q9UBU7 674 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-218ENST00000529566 PRR5LQ6MZQ0 368 aa20.88■□□□□ 0.93
TSPAN4-218ENST00000529566 NIP7Q9Y221 180 aaKnown RBP eCLIP20.88■□□□□ 0.93
TSPAN4-218ENST00000529566 GIGYF2Q6Y7W6 1299 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-218ENST00000529566 N4BP2Q86UW6 1770 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-218ENST00000529566 ATP10DQ9P241 1426 aa20.87■□□□□ 0.93
TSPAN4-218ENST00000529566 NUP98P52948 1817 aa20.86■□□□□ 0.93
TSPAN4-218ENST00000529566 ZNF34Q8IZ26 560 aa20.86■□□□□ 0.93
TSPAN4-218ENST00000529566 HYPKQ9NX55 129 aa20.86■□□□□ 0.93
TSPAN4-218ENST00000529566 CHRNA5P30532 468 aa20.85■□□□□ 0.93
TSPAN4-218ENST00000529566 AIMP1Q12904 312 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-218ENST00000529566 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-218ENST00000529566 CCDC24Q8N4L8 307 aa20.85■□□□□ 0.93
TSPAN4-218ENST00000529566 UBN2Q6ZU65 1347 aa20.84■□□□□ 0.93
TSPAN4-218ENST00000529566 TWISTNBQ3B726 338 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-218ENST00000529566 NBPF5PQ86XG9 351 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-218ENST00000529566 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
TSPAN4-218ENST00000529566 BRIP1Q9BX63 1249 aa20.84■□□□□ 0.93
TSPAN4-218ENST00000529566 WWC3Q9ULE0 1092 aa20.84■□□□□ 0.93
TSPAN4-218ENST00000529566 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
TSPAN4-218ENST00000529566 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
TSPAN4-218ENST00000529566 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
TSPAN4-218ENST00000529566 EXOSC9Q06265 439 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-218ENST00000529566 TPTE2Q6XPS3 522 aa20.82■□□□□ 0.92
TSPAN4-218ENST00000529566 PHAXQ9H814 394 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-218ENST00000529566 BRCA1P38398 1863 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 VAMP4O75379 141 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 GPTP24298 496 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 ANKRD13DQ6ZTN6 518 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 PLBD2Q8NHP8 589 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 CHMP4AQ9BY43 222 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 PIM2Q9P1W9 311 aa20.81■□□□□ 0.92
TSPAN4-218ENST00000529566 TCIRG1Q13488 830 aa20.8■□□□□ 0.92
TSPAN4-218ENST00000529566 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
TSPAN4-218ENST00000529566 C2CD5Q86YS7 1000 aa20.8■□□□□ 0.92
TSPAN4-218ENST00000529566 KLRG2A4D1S0 409 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-218ENST00000529566 FAM177BA6PVY3 158 aa20.79■□□□□ 0.92
TSPAN4-218ENST00000529566 PDE6BP35913 854 aa20.79■□□□□ 0.92
TSPAN4-218ENST00000529566 ST5P78524 1137 aa20.79■□□□□ 0.92
TSPAN4-218ENST00000529566 IBTKQ9P2D0 1353 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-218ENST00000529566 H0YIN7 160 aa20.78■□□□□ 0.92
TSPAN4-218ENST00000529566 TCERG1O14776 1098 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-218ENST00000529566 NTSR2O95665 410 aa20.78■□□□□ 0.92
TSPAN4-218ENST00000529566 BCS1LQ9Y276 419 aa20.78■□□□□ 0.92
TSPAN4-218ENST00000529566 SLFN5Q08AF3 891 aa20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 PARP10Q53GL7 1025 aa20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 HSP90AB3PQ58FF7 597 aa20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 DALRD3Q5D0E6 543 aaKnown RBP20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 NLRP10Q86W26 655 aa20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 NYXQ9GZU5 481 aa20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 PDZRN3Q9UPQ7 1066 aa20.77■□□□□ 0.92
TSPAN4-218ENST00000529566 E9PSI1 815 aa20.76■□□□□ 0.91
TSPAN4-218ENST00000529566 NPHP1O15259 732 aa20.76■□□□□ 0.91
TSPAN4-218ENST00000529566 ERFEQ4G0M1 354 aa20.76■□□□□ 0.91
TSPAN4-218ENST00000529566 NUTM1Q86Y26 1132 aa20.76■□□□□ 0.91
TSPAN4-218ENST00000529566 TRMT2AQ8IZ69 625 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-218ENST00000529566 ISCA1Q9BUE6 129 aa20.76■□□□□ 0.91
TSPAN4-218ENST00000529566 ABCC12Q96J65 1359 aa20.75■□□□□ 0.91
TSPAN4-218ENST00000529566 DLEC1Q9Y238 1755 aa20.75■□□□□ 0.91
TSPAN4-218ENST00000529566 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
TSPAN4-218ENST00000529566 SRGNP10124 158 aa20.75■□□□□ 0.91
TSPAN4-218ENST00000529566 G2E3Q7L622 706 aa20.75■□□□□ 0.91
TSPAN4-218ENST00000529566 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
TSPAN4-218ENST00000529566 COL11A2P13942 1736 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-218ENST00000529566 PPP1R42Q7Z4L9 355 aa20.74■□□□□ 0.91
TSPAN4-218ENST00000529566 UTP14AQ9BVJ6 771 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-218ENST00000529566 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
TSPAN4-218ENST00000529566 ANKRD36CQ5JPF3 1778 aa20.73■□□□□ 0.91
TSPAN4-218ENST00000529566 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-218ENST00000529566 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-218ENST00000529566 TTLL6Q8N841 843 aa20.73■□□□□ 0.91
TSPAN4-218ENST00000529566 RIC1Q4ADV7 1423 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms