RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 PI4KAP2A4QPH2 592 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 NEBLO76041 1014 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 LIG1P18858 919 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 TNIP1Q15025 636 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 KRT28Q7Z3Y7 464 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 PI4KAP1Q8N8J0 262 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 PPP1R12BO60237 982 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-220ENST00000529526 GBP2P32456 591 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-220ENST00000529526 TTC22Q5TAA0 569 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 UBE3BQ7Z3V4 1068 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 ECHDC1Q9NTX5 307 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 ABCA10Q8WWZ4 1543 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 SCLT1Q96NL6 688 aa9.43□□□□□ -0.9
CTNND1-220ENST00000529526 CUL7Q14999 1698 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CCDC194A0A1B0GVG4 234 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CATIPQ7Z7H3 387 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.42□□□□□ -0.97e-6■□□□□ 8.3
CTNND1-220ENST00000529526 STX6O43752 255 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 KIF5CO60282 957 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CWC25Q9NXE8 425 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-220ENST00000529526 ZSCAN12O43309 604 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 PRDM10Q9NQV6 1147 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 USP16Q9Y5T5 823 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 ACEP12821 1306 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 TNNT1P13805 278 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 MICU3Q86XE3 530 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CCDC113Q9H0I3 377 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 CBX1P83916 185 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 TMCO3Q6UWJ1 677 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 TMC6Q7Z403 805 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
CTNND1-220ENST00000529526 LDHAL6AQ6ZMR3 332 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 C16orf45Q96MC5 204 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-220ENST00000529526 PHAXQ9H814 394 aaKnown RBP9.41□□□□□ -0.9
CTNND1-220ENST00000529526 TMEM266Q2M3C6 531 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 CUL5Q93034 780 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 RNF41Q9H4P4 317 aaPredicted RBP9.41□□□□□ -0.9
CTNND1-220ENST00000529526 TTC21BQ7Z4L5 1316 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 NECAB1Q8N987 351 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 PIK3R4Q99570 1358 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 NEK1Q96PY6 1258 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 SLC26A6Q9BXS9 759 aa9.41□□□□□ -0.9
CTNND1-220ENST00000529526 EXOC5O00471 708 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 DESP17661 470 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 TDRD12Q587J7 1177 aaKnown RBP9.4□□□□□ -0.9
CTNND1-220ENST00000529526 LRRC2Q9BYS8 371 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 POTEJP0CG39 1038 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
CTNND1-220ENST00000529526 CRACR2AQ9BSW2 395 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 ADCY5O95622 1261 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 METAP2P50579 478 aaKnown RBP eCLIP9.4□□□□□ -0.9
CTNND1-220ENST00000529526 BMP2KLQ5H9B9 411 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 KIF18AQ8NI77 898 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 GOLGA6L7A0A1B0GV03 622 aa9.4□□□□□ -0.9
CTNND1-220ENST00000529526 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.9
CTNND1-220ENST00000529526 SPTY2D1Q68D10 685 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-220ENST00000529526 C14orf93Q9H972 538 aaKnown RBP9.4□□□□□ -0.9
CTNND1-220ENST00000529526 WDR78Q5VTH9 848 aa9.4□□□□□ -0.91
CTNND1-220ENST00000529526 CTAGE5O15320 804 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 BAG4O95429 457 aaKnown RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 STX1AQ16623 288 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 MEIS3Q99687 375 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 TSPY2A6NKD2 308 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 TTF1Q15361 905 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 MFSD6Q6ZSS7 791 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 CTNNBL1Q8WYA6 563 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 GRIN2AQ12879 1464 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 MTIF2P46199 727 aaKnown RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 NSD2O96028 1365 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 NUCB1Q02818 461 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 NGLY1Q96IV0 654 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 TCEANC2Q96MN5 208 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 RAB34Q9BZG1 259 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 DDX19AQ9NUU7 478 aaKnown RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 BCCIPQ9P287 314 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■■■□ 21.2
CTNND1-220ENST00000529526 YEATS4O95619 227 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 SDSP20132 328 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-220ENST00000529526 LUZP1Q86V48 1076 aa9.39□□□□□ -0.91
CTNND1-220ENST00000529526 MAPK8IP2Q13387 824 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-220ENST00000529526 NCOA7Q8NI08 942 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 DYDC1Q8WWB3 177 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 MACROD2A1Z1Q3 448 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 MYCNP04198 464 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-220ENST00000529526 GIMAP6Q6P9H5 292 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
CTNND1-220ENST00000529526 TBC1D32Q96NH3 1257 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms