RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 TNRC18O15417 2968 aaPredicted RBP19.28■□□□□ 0.68
TRIM3-208ENST00000529058 EIF5P55010 431 aaKnown RBP19.28■□□□□ 0.68
TRIM3-208ENST00000529058 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
TRIM3-208ENST00000529058 LGR6Q9HBX8 967 aa19.28■□□□□ 0.68
TRIM3-208ENST00000529058 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.68
TRIM3-208ENST00000529058 SRGNP10124 158 aa19.27■□□□□ 0.68
TRIM3-208ENST00000529058 SULT6B1Q6IMI4 303 aa19.27■□□□□ 0.68
TRIM3-208ENST00000529058 MASTLQ96GX5 879 aa19.27■□□□□ 0.68
TRIM3-208ENST00000529058 CAPNS2Q96L46 248 aa19.26■□□□□ 0.67
TRIM3-208ENST00000529058 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
TRIM3-208ENST00000529058 NPHP1O15259 732 aa19.25■□□□□ 0.67
TRIM3-208ENST00000529058 ECE1P42892 770 aa19.25■□□□□ 0.67
TRIM3-208ENST00000529058 CCDC93Q567U6 631 aa19.25■□□□□ 0.67
TRIM3-208ENST00000529058 PAXIP1Q6ZW49 1069 aaPredicted RBP19.25■□□□□ 0.67
TRIM3-208ENST00000529058 CNBD1Q8NA66 436 aa19.25■□□□□ 0.67
TRIM3-208ENST00000529058 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRIM3-208ENST00000529058 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
TRIM3-208ENST00000529058 RNMTO43148 476 aaKnown RBP19.24■□□□□ 0.67
TRIM3-208ENST00000529058 STARD3NLO95772 234 aa19.24■□□□□ 0.67
TRIM3-208ENST00000529058 ST5P78524 1137 aa19.24■□□□□ 0.67
TRIM3-208ENST00000529058 C7orf43Q8WVR3 580 aa19.24■□□□□ 0.67
TRIM3-208ENST00000529058 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
TRIM3-208ENST00000529058 CASP8AP2Q9UKL3 1982 aa19.24■□□□□ 0.67
TRIM3-208ENST00000529058 FKBP4Q02790 459 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRIM3-208ENST00000529058 SETDB2Q96T68 719 aa19.23■□□□□ 0.67
TRIM3-208ENST00000529058 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
TRIM3-208ENST00000529058 ZNF277Q9NRM2 450 aaPredicted RBP19.23■□□□□ 0.67
TRIM3-208ENST00000529058 TBC1D2BQ9UPU7 963 aa19.23■□□□□ 0.67
TRIM3-208ENST00000529058 LTBP1Q14766 1721 aa19.22■□□□□ 0.67
TRIM3-208ENST00000529058 GRM1Q13255 1194 aa19.22■□□□□ 0.67
TRIM3-208ENST00000529058 CYP4F22Q6NT55 531 aa19.22■□□□□ 0.67
TRIM3-208ENST00000529058 TSKSQ9UJT2 592 aa19.22■□□□□ 0.67
TRIM3-208ENST00000529058 FZD9O00144 591 aa19.2■□□□□ 0.66
TRIM3-208ENST00000529058 GPC2Q8N158 579 aa19.2■□□□□ 0.66
TRIM3-208ENST00000529058 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
TRIM3-208ENST00000529058 BCORQ6W2J9 1755 aa19.19■□□□□ 0.66
TRIM3-208ENST00000529058 MAP2K2P36507 400 aa19.18■□□□□ 0.66
TRIM3-208ENST00000529058 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRIM3-208ENST00000529058 RTKN2Q8IZC4 609 aa19.18■□□□□ 0.66
TRIM3-208ENST00000529058 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
TRIM3-208ENST00000529058 CA12O43570 354 aa19.17■□□□□ 0.66
TRIM3-208ENST00000529058 IL13P35225 146 aa19.17■□□□□ 0.66
TRIM3-208ENST00000529058 IL6STP40189 918 aaPredicted RBP19.17■□□□□ 0.66
TRIM3-208ENST00000529058 IARSP41252 1262 aaKnown RBP19.17■□□□□ 0.66
TRIM3-208ENST00000529058 AOC2O75106 756 aa19.16■□□□□ 0.66
TRIM3-208ENST00000529058 CAMTA2O94983 1202 aa19.16■□□□□ 0.66
TRIM3-208ENST00000529058 NPR1P16066 1061 aa19.16■□□□□ 0.66
TRIM3-208ENST00000529058 CST9Q5W186 159 aa19.16■□□□□ 0.66
TRIM3-208ENST00000529058 OLFM4Q6UX06 510 aa19.16■□□□□ 0.66
TRIM3-208ENST00000529058 TLL2Q9Y6L7 1015 aa19.16■□□□□ 0.66
TRIM3-208ENST00000529058 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
TRIM3-208ENST00000529058 TEX13AQ9BXU3 409 aaPredicted RBP19.15■□□□□ 0.66
TRIM3-208ENST00000529058 LMOD1P29536 600 aaPredicted RBP19.14■□□□□ 0.65
TRIM3-208ENST00000529058 TRIM26Q12899 539 aaPredicted RBP19.14■□□□□ 0.65
TRIM3-208ENST00000529058 DGKZQ13574 1117 aa19.14■□□□□ 0.65
TRIM3-208ENST00000529058 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
TRIM3-208ENST00000529058 POLR3GLQ9BT43 218 aa19.14■□□□□ 0.65
TRIM3-208ENST00000529058 HEG1Q9ULI3 1381 aa19.14■□□□□ 0.65
TRIM3-208ENST00000529058 NBPF5PQ86XG9 351 aaPredicted RBP19.13■□□□□ 0.65
TRIM3-208ENST00000529058 JDP2Q8WYK2 163 aa19.13■□□□□ 0.65
TRIM3-208ENST00000529058 ZNF496Q96IT1 587 aaPredicted RBP19.13■□□□□ 0.65
TRIM3-208ENST00000529058 GJA3Q9Y6H8 435 aa19.13■□□□□ 0.65
TRIM3-208ENST00000529058 KLRG2A4D1S0 409 aaPredicted RBP19.12■□□□□ 0.65
TRIM3-208ENST00000529058 TRAF5O00463 557 aa19.12■□□□□ 0.65
TRIM3-208ENST00000529058 MORC1Q86VD1 984 aa19.12■□□□□ 0.65
TRIM3-208ENST00000529058 EIF6P56537 245 aaKnown RBP19.11■□□□□ 0.65
TRIM3-208ENST00000529058 MTHFSDQ2M296 383 aaKnown RBP19.11■□□□□ 0.65
TRIM3-208ENST00000529058 A1BGP04217 495 aa19.1■□□□□ 0.65
TRIM3-208ENST00000529058 EPS15P42566 896 aa19.1■□□□□ 0.65
TRIM3-208ENST00000529058 SCNN1DP51172 638 aa19.1■□□□□ 0.65
TRIM3-208ENST00000529058 BRPF1P55201 1214 aaPredicted RBP19.1■□□□□ 0.65
TRIM3-208ENST00000529058 ZNF790Q6PG37 636 aa19.1■□□□□ 0.65
TRIM3-208ENST00000529058 USP50Q70EL3 339 aaPredicted RBP19.1■□□□□ 0.65
TRIM3-208ENST00000529058 DZIP3Q86Y13 1208 aaKnown RBP19.1■□□□□ 0.65
TRIM3-208ENST00000529058 PSMD1Q99460 953 aa19.1■□□□□ 0.65
TRIM3-208ENST00000529058 SIPA1L3O60292 1781 aaPredicted RBP19.09■□□□□ 0.65
TRIM3-208ENST00000529058 HMOX1P09601 288 aa19.09■□□□□ 0.65
TRIM3-208ENST00000529058 ALDH1B1P30837 517 aa19.09■□□□□ 0.65
TRIM3-208ENST00000529058 SAPCD2Q86UD0 394 aa19.09■□□□□ 0.65
TRIM3-208ENST00000529058 SNED1Q8TER0 1413 aa19.08■□□□□ 0.65
TRIM3-208ENST00000529058 COL4A5P29400 1685 aa19.08■□□□□ 0.65
TRIM3-208ENST00000529058 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
TRIM3-208ENST00000529058 HHIPL1Q96JK4 782 aa19.08■□□□□ 0.64
TRIM3-208ENST00000529058 PANK3Q9H999 370 aa19.08■□□□□ 0.64
TRIM3-208ENST00000529058 TPTE2Q6XPS3 522 aa19.07■□□□□ 0.64
TRIM3-208ENST00000529058 PRPF38BQ5VTL8 546 aaKnown RBP19.06■□□□□ 0.64
TRIM3-208ENST00000529058 FMNL2Q96PY5 1086 aa19.06■□□□□ 0.64
TRIM3-208ENST00000529058 ZNF652Q9Y2D9 606 aa19.06■□□□□ 0.64
TRIM3-208ENST00000529058 CELF2O95319 508 aaKnown RBP19.05■□□□□ 0.64
TRIM3-208ENST00000529058 TEFQ10587 303 aa19.05■□□□□ 0.64
TRIM3-208ENST00000529058 CIAPIN1Q6FI81 312 aa19.05■□□□□ 0.64
TRIM3-208ENST00000529058 SOX10P56693 466 aa19.04■□□□□ 0.64
TRIM3-208ENST00000529058 CC2D2BQ6DHV5 1058 aa19.03■□□□□ 0.64
TRIM3-208ENST00000529058 LARGE2Q8N3Y3 721 aa19.02■□□□□ 0.64
TRIM3-208ENST00000529058 ADARB2Q9NS39 739 aaKnown RBP19.02■□□□□ 0.64
TRIM3-208ENST00000529058 NIP7Q9Y221 180 aaKnown RBP eCLIP19.02■□□□□ 0.64
TRIM3-208ENST00000529058 FAM177BA6PVY3 158 aa19.01■□□□□ 0.63
TRIM3-208ENST00000529058 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
TRIM3-208ENST00000529058 IL17REQ8NFR9 667 aa19.01■□□□□ 0.63
TRIM3-208ENST00000529058 NOGQ13253 232 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms