RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SF3B2Q13435 895 aaKnown RBP31.36■■■□□ 2.61
LDLRAD3-203ENST00000528989 MVPQ14764 893 aaKnown RBP31.35■■■□□ 2.61
LDLRAD3-203ENST00000528989 PLBD2Q8NHP8 589 aa31.34■■■□□ 2.61
LDLRAD3-203ENST00000528989 TAF1LQ8IZX4 1826 aa31.34■■■□□ 2.61
LDLRAD3-203ENST00000528989 INTS3Q68E01 1043 aaKnown RBP31.33■■■□□ 2.61
LDLRAD3-203ENST00000528989 NPM2Q86SE8 214 aaKnown RBP31.33■■■□□ 2.61
LDLRAD3-203ENST00000528989 RPS6KA4O75676 772 aa31.32■■■□□ 2.6
LDLRAD3-203ENST00000528989 DZIP3Q86Y13 1208 aaKnown RBP31.32■■■□□ 2.6
LDLRAD3-203ENST00000528989 AK7Q96M32 723 aa31.32■■■□□ 2.6
LDLRAD3-203ENST00000528989 C4BP0C0L5 1744 aa31.31■■■□□ 2.6
LDLRAD3-203ENST00000528989 RREB1Q92766 1687 aa31.31■■■□□ 2.6
LDLRAD3-203ENST00000528989 BEND3Q5T5X7 828 aa31.31■■■□□ 2.6
LDLRAD3-203ENST00000528989 HLFQ16534 295 aa31.3■■■□□ 2.6
LDLRAD3-203ENST00000528989 KIF6Q6ZMV9 814 aa31.3■■■□□ 2.6
LDLRAD3-203ENST00000528989 RTCBQ9Y3I0 505 aaKnown RBP31.3■■■□□ 2.6
LDLRAD3-203ENST00000528989 COL15A1P39059 1388 aa31.3■■■□□ 2.6
LDLRAD3-203ENST00000528989 PHF14O94880 888 aa31.29■■■□□ 2.6
LDLRAD3-203ENST00000528989 BAG6P46379 1132 aa31.29■■■□□ 2.6
LDLRAD3-203ENST00000528989 CWF19L2Q2TBE0 894 aaKnown RBP31.29■■■□□ 2.6
LDLRAD3-203ENST00000528989 MYD88Q99836 296 aa31.29■■■□□ 2.6
LDLRAD3-203ENST00000528989 METTL22Q9BUU2 404 aaPredicted RBP31.29■■■□□ 2.6
LDLRAD3-203ENST00000528989 MAP3K15Q6ZN16 1313 aa31.28■■■□□ 2.6
LDLRAD3-203ENST00000528989 CCT4P50991 539 aaKnown RBP31.28■■■□□ 2.6
LDLRAD3-203ENST00000528989 ZNF827Q17R98 1081 aa31.28■■■□□ 2.6
LDLRAD3-203ENST00000528989 ATP5J2-PTCD1G3V325 749 aa31.27■■■□□ 2.6
LDLRAD3-203ENST00000528989 ZBTB7BO15156 539 aaPredicted RBP31.27■■■□□ 2.6
LDLRAD3-203ENST00000528989 IGKV5-2P06315 115 aa31.27■■■□□ 2.6
LDLRAD3-203ENST00000528989 SRCIN1Q9C0H9 1055 aa31.27■■■□□ 2.6
LDLRAD3-203ENST00000528989 ARHGEF1Q92888 912 aaKnown RBP31.26■■■□□ 2.59
LDLRAD3-203ENST00000528989 DDX19BQ9UMR2 479 aa31.26■■■□□ 2.59
LDLRAD3-203ENST00000528989 CCDC125Q86Z20 511 aa31.25■■■□□ 2.59
LDLRAD3-203ENST00000528989 ILDR2Q71H61 639 aa31.25■■■□□ 2.59
LDLRAD3-203ENST00000528989 CAMTA2O94983 1202 aa31.24■■■□□ 2.59
LDLRAD3-203ENST00000528989 AKT1S1Q96B36 256 aa31.24■■■□□ 2.59
LDLRAD3-203ENST00000528989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.23■■■□□ 2.59
LDLRAD3-203ENST00000528989 LINS1Q8NG48 757 aa31.23■■■□□ 2.59
LDLRAD3-203ENST00000528989 UPF1Q92900 1129 aaKnown RBP eCLIP31.23■■■□□ 2.59
LDLRAD3-203ENST00000528989 TRAPPC3LQ5T215 181 aa31.23■■■□□ 2.59
LDLRAD3-203ENST00000528989 GIGYF2Q6Y7W6 1299 aaKnown RBP31.23■■■□□ 2.59
LDLRAD3-203ENST00000528989 MEIS3Q99687 375 aa31.23■■■□□ 2.59
LDLRAD3-203ENST00000528989 ERVV-1B6SEH8 477 aa31.22■■■□□ 2.59
LDLRAD3-203ENST00000528989 NEXNQ0ZGT2 675 aa31.22■■■□□ 2.59
LDLRAD3-203ENST00000528989 TFCP2L1Q9NZI6 479 aa31.22■■■□□ 2.59
LDLRAD3-203ENST00000528989 SRP68Q9UHB9 627 aaKnown RBP31.22■■■□□ 2.59
LDLRAD3-203ENST00000528989 PXDNLA1KZ92 1463 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 ATP10DQ9P241 1426 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 A0A087WZG4 1122 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 NEURL1BA8MQ27 555 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 TCIRG1Q13488 830 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 USP44Q9H0E7 712 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 ANO8Q9HCE9 1232 aaPredicted RBP31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 ZBTB40Q9NUA8 1239 aa31.21■■■□□ 2.59
LDLRAD3-203ENST00000528989 RGPD3A6NKT7 1758 aaPredicted RBP31.2■■■□□ 2.59
LDLRAD3-203ENST00000528989 RGPD4Q7Z3J3 1758 aa31.2■■■□□ 2.59
LDLRAD3-203ENST00000528989 ARFGEF2Q9Y6D5 1785 aa31.2■■■□□ 2.58
LDLRAD3-203ENST00000528989 USPL1Q5W0Q7 1092 aa31.18■■■□□ 2.58
LDLRAD3-203ENST00000528989 NUP188Q5SRE5 1749 aa31.18■■■□□ 2.58
LDLRAD3-203ENST00000528989 GPTP24298 496 aa31.18■■■□□ 2.58
LDLRAD3-203ENST00000528989 RFC4P35249 363 aa31.18■■■□□ 2.58
LDLRAD3-203ENST00000528989 C1orf115Q9H7X2 142 aa31.18■■■□□ 2.58
LDLRAD3-203ENST00000528989 NARFQ9UHQ1 456 aa31.18■■■□□ 2.58
LDLRAD3-203ENST00000528989 ALDH1L1O75891 902 aa31.17■■■□□ 2.58
LDLRAD3-203ENST00000528989 NBPF7P0C2Y1 421 aaPredicted RBP31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 SSFA2P28290 1259 aa31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 BCL2L12Q9HB09 334 aa31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 ZPR1O75312 459 aa31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 HMGB2P26583 209 aaKnown RBP31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 GCKRQ14397 625 aa31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 JARID2Q92833 1246 aaPredicted RBP31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 ISCA1Q9BUE6 129 aa31.16■■■□□ 2.58
LDLRAD3-203ENST00000528989 ERICH6BQ5W0A0 696 aa31.15■■■□□ 2.58
LDLRAD3-203ENST00000528989 UBR3Q6ZT12 1888 aa31.15■■■□□ 2.58
LDLRAD3-203ENST00000528989 ADRA2BP18089 450 aa31.14■■■□□ 2.58
LDLRAD3-203ENST00000528989 C9orf78Q9NZ63 289 aaPredicted RBP31.13■■■□□ 2.57
LDLRAD3-203ENST00000528989 PCDHB15Q9Y5E8 787 aa31.13■■■□□ 2.57
LDLRAD3-203ENST00000528989 USP42Q9H9J4 1324 aaKnown RBP31.13■■■□□ 2.57
LDLRAD3-203ENST00000528989 SLC15A2Q16348 729 aa31.12■■■□□ 2.57
LDLRAD3-203ENST00000528989 RTL5Q5HYW3 569 aaPredicted RBP31.12■■■□□ 2.57
LDLRAD3-203ENST00000528989 COL23A1Q86Y22 540 aaPredicted RBP31.12■■■□□ 2.57
LDLRAD3-203ENST00000528989 ZNF34Q8IZ26 560 aa31.12■■■□□ 2.57
LDLRAD3-203ENST00000528989 UBN2Q6ZU65 1347 aa31.11■■■□□ 2.57
LDLRAD3-203ENST00000528989 HSP90AB3PQ58FF7 597 aa31.11■■■□□ 2.57
LDLRAD3-203ENST00000528989 GRM8O00222 908 aa31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 CLEC4GQ6UXB4 293 aa31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 CCDC191Q8NCU4 936 aa31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 CWC25Q9NXE8 425 aaPredicted RBP31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 TRIM28Q13263 835 aaKnown RBP31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 BICDL1Q6ZP65 573 aa31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 NLRP10Q86W26 655 aa31.1■■■□□ 2.57
LDLRAD3-203ENST00000528989 NUP98P52948 1817 aa31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 TBC1D9BQ66K14 1250 aa31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 B4GALNT3Q6L9W6 998 aa31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 PPP4R2Q9NY27 417 aa31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 NIP7Q9Y221 180 aaKnown RBP eCLIP31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 ZNF652Q9Y2D9 606 aa31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 PNPLA7Q6ZV29 1317 aa31.09■■■□□ 2.57
LDLRAD3-203ENST00000528989 MSH5O43196 834 aa31.08■■■□□ 2.57
LDLRAD3-203ENST00000528989 STK32BQ9NY57 414 aa31.08■■■□□ 2.57
LDLRAD3-203ENST00000528989 N4BP2Q86UW6 1770 aaPredicted RBP31.08■■■□□ 2.57
LDLRAD3-203ENST00000528989 GNAI3P08754 354 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms