RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 CCDC24Q8N4L8 307 aa17■□□□□ 0.31
PDZD3-209ENST00000528730 CNBD1Q8NA66 436 aa17■□□□□ 0.31
PDZD3-209ENST00000528730 CFAP44Q96MT7 982 aa17■□□□□ 0.31
PDZD3-209ENST00000528730 KIAA1551Q9HCM1 1747 aa16.99■□□□□ 0.31
PDZD3-209ENST00000528730 ST5P78524 1137 aa16.99■□□□□ 0.31
PDZD3-209ENST00000528730 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
PDZD3-209ENST00000528730 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
PDZD3-209ENST00000528730 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 ANXA1P04083 346 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
PDZD3-209ENST00000528730 AIMP1Q12904 312 aaKnown RBP16.98■□□□□ 0.31
PDZD3-209ENST00000528730 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 ZBTB3Q9H5J0 574 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 MBIPQ9NS73 344 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 IFT57Q9NWB7 429 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
PDZD3-209ENST00000528730 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDZD3-209ENST00000528730 NRXN2Q9P2S2 1712 aa16.97■□□□□ 0.31
PDZD3-209ENST00000528730 CCDC27Q2M243 656 aa16.97■□□□□ 0.31
PDZD3-209ENST00000528730 TTLL7Q6ZT98 887 aa16.97■□□□□ 0.31
PDZD3-209ENST00000528730 C2CD5Q86YS7 1000 aa16.97■□□□□ 0.31
PDZD3-209ENST00000528730 MAP3K15Q6ZN16 1313 aa16.96■□□□□ 0.31
PDZD3-209ENST00000528730 H0YIN7 160 aa16.96■□□□□ 0.31
PDZD3-209ENST00000528730 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
PDZD3-209ENST00000528730 HLFQ16534 295 aa16.96■□□□□ 0.31
PDZD3-209ENST00000528730 DALRD3Q5D0E6 543 aaKnown RBP16.96■□□□□ 0.31
PDZD3-209ENST00000528730 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
PDZD3-209ENST00000528730 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
PDZD3-209ENST00000528730 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
PDZD3-209ENST00000528730 NUP98P52948 1817 aa16.96■□□□□ 0.3
PDZD3-209ENST00000528730 DUSP27Q5VZP5 1158 aa16.95■□□□□ 0.3
PDZD3-209ENST00000528730 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
PDZD3-209ENST00000528730 BRCA1P38398 1863 aaKnown RBP16.95■□□□□ 0.3
PDZD3-209ENST00000528730 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
PDZD3-209ENST00000528730 GPTP24298 496 aa16.94■□□□□ 0.3
PDZD3-209ENST00000528730 PDE6BP35913 854 aa16.94■□□□□ 0.3
PDZD3-209ENST00000528730 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
PDZD3-209ENST00000528730 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
PDZD3-209ENST00000528730 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDZD3-209ENST00000528730 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
PDZD3-209ENST00000528730 ERVV-1B6SEH8 477 aa16.93■□□□□ 0.3
PDZD3-209ENST00000528730 NEFLP07196 543 aa16.93■□□□□ 0.3
PDZD3-209ENST00000528730 TPTE2Q6XPS3 522 aa16.93■□□□□ 0.3
PDZD3-209ENST00000528730 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
PDZD3-209ENST00000528730 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
PDZD3-209ENST00000528730 ANKRD31Q8N7Z5 1873 aa16.93■□□□□ 0.3
PDZD3-209ENST00000528730 HOXB7P09629 217 aa16.92■□□□□ 0.3
PDZD3-209ENST00000528730 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
PDZD3-209ENST00000528730 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
PDZD3-209ENST00000528730 TSR2Q969E8 191 aaKnown RBP16.92■□□□□ 0.3
PDZD3-209ENST00000528730 BRIP1Q9BX63 1249 aa16.92■□□□□ 0.3
PDZD3-209ENST00000528730 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDZD3-209ENST00000528730 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
PDZD3-209ENST00000528730 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
PDZD3-209ENST00000528730 KCNA3P22001 575 aa16.91■□□□□ 0.3
PDZD3-209ENST00000528730 WDR63Q8IWG1 891 aa16.91■□□□□ 0.3
PDZD3-209ENST00000528730 NYXQ9GZU5 481 aa16.91■□□□□ 0.3
PDZD3-209ENST00000528730 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
PDZD3-209ENST00000528730 DBF4Q9UBU7 674 aaPredicted RBP16.91■□□□□ 0.3
PDZD3-209ENST00000528730 DLEC1Q9Y238 1755 aa16.91■□□□□ 0.3
PDZD3-209ENST00000528730 E9PSI1 815 aa16.9■□□□□ 0.3
PDZD3-209ENST00000528730 RGL2O15211 777 aa16.9■□□□□ 0.3
PDZD3-209ENST00000528730 PDIA6Q15084 440 aa16.9■□□□□ 0.3
PDZD3-209ENST00000528730 TTLL6Q8N841 843 aa16.9■□□□□ 0.3
PDZD3-209ENST00000528730 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
PDZD3-209ENST00000528730 GIGYF2Q6Y7W6 1299 aaKnown RBP16.89■□□□□ 0.29
PDZD3-209ENST00000528730 COL11A2P13942 1736 aaPredicted RBP16.89■□□□□ 0.29
PDZD3-209ENST00000528730 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 ANKRD36CQ5JPF3 1778 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 C8orf58Q8NAV2 365 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 ZNF784Q8NCA9 323 aaPredicted RBP16.88■□□□□ 0.29
PDZD3-209ENST00000528730 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
PDZD3-209ENST00000528730 SLFN5Q08AF3 891 aa16.87■□□□□ 0.29
PDZD3-209ENST00000528730 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
PDZD3-209ENST00000528730 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
PDZD3-209ENST00000528730 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
PDZD3-209ENST00000528730 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
PDZD3-209ENST00000528730 CNKSR1Q969H4 720 aa16.86■□□□□ 0.29
PDZD3-209ENST00000528730 ZNF428Q96B54 188 aa16.86■□□□□ 0.29
PDZD3-209ENST00000528730 STK31Q9BXU1 1019 aa16.86■□□□□ 0.29
PDZD3-209ENST00000528730 SUPT16HQ9Y5B9 1047 aaKnown RBP16.86■□□□□ 0.29
PDZD3-209ENST00000528730 IL16Q14005 1332 aa16.86■□□□□ 0.29
PDZD3-209ENST00000528730 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
PDZD3-209ENST00000528730 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 SUSD4Q5VX71 490 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 ANKRD13DQ6ZTN6 518 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 MASTLQ96GX5 879 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 UBN2Q6ZU65 1347 aa16.85■□□□□ 0.29
PDZD3-209ENST00000528730 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
PDZD3-209ENST00000528730 STYK1Q6J9G0 422 aa16.84■□□□□ 0.29
PDZD3-209ENST00000528730 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
PDZD3-209ENST00000528730 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
PDZD3-209ENST00000528730 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms