RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 CHIC2Q9UKJ5 165 aa12.63□□□□□ -0.39
COMMD9-205ENST00000528608 PTPRMP28827 1452 aa12.63□□□□□ -0.39
COMMD9-205ENST00000528608 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
COMMD9-205ENST00000528608 RIMS1Q86UR5 1692 aaKnown RBP12.63□□□□□ -0.39
COMMD9-205ENST00000528608 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
COMMD9-205ENST00000528608 RIPOR1Q6ZS17 1223 aa12.62□□□□□ -0.39
COMMD9-205ENST00000528608 PHTF2Q8N3S3 785 aa12.62□□□□□ -0.39
COMMD9-205ENST00000528608 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
COMMD9-205ENST00000528608 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
COMMD9-205ENST00000528608 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
COMMD9-205ENST00000528608 NBPF10Q6P3W6 841 aaKnown RBP12.61□□□□□ -0.39
COMMD9-205ENST00000528608 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
COMMD9-205ENST00000528608 ESYT1Q9BSJ8 1104 aa12.61□□□□□ -0.39
COMMD9-205ENST00000528608 DYRK1BQ9Y463 629 aa12.61□□□□□ -0.39
COMMD9-205ENST00000528608 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
COMMD9-205ENST00000528608 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
COMMD9-205ENST00000528608 IL2RAP01589 272 aa12.6□□□□□ -0.39
COMMD9-205ENST00000528608 USP4Q13107 963 aa12.6□□□□□ -0.39
COMMD9-205ENST00000528608 SEMA3FQ13275 785 aa12.6□□□□□ -0.39
COMMD9-205ENST00000528608 GAS2L1Q99501 681 aaPredicted RBP12.6□□□□□ -0.39
COMMD9-205ENST00000528608 RRP7BPQ9NSQ0 103 aa12.6□□□□□ -0.39
COMMD9-205ENST00000528608 SPATA31C2B4DYI2 1134 aa12.59□□□□□ -0.39
COMMD9-205ENST00000528608 KIF3BO15066 747 aa12.59□□□□□ -0.39
COMMD9-205ENST00000528608 GGT6Q6P531 493 aa12.59□□□□□ -0.39
COMMD9-205ENST00000528608 TAS1R3Q7RTX0 852 aa12.59□□□□□ -0.39
COMMD9-205ENST00000528608 COG6Q9Y2V7 657 aa12.59□□□□□ -0.39
COMMD9-205ENST00000528608 WASLO00401 505 aaPredicted RBP12.58□□□□□ -0.4
COMMD9-205ENST00000528608 SOX11P35716 441 aa12.58□□□□□ -0.4
COMMD9-205ENST00000528608 CEBPAP49715 358 aaPredicted RBP12.58□□□□□ -0.4
COMMD9-205ENST00000528608 CENPCQ03188 943 aa12.58□□□□□ -0.4
COMMD9-205ENST00000528608 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
COMMD9-205ENST00000528608 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
COMMD9-205ENST00000528608 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
COMMD9-205ENST00000528608 ZNF837Q96EG3 531 aaPredicted RBP12.58□□□□□ -0.4
COMMD9-205ENST00000528608 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
COMMD9-205ENST00000528608 RRBP1Q9P2E9 1410 aaKnown RBP12.58□□□□□ -0.4
COMMD9-205ENST00000528608 NCOA1Q15788 1441 aa12.57□□□□□ -0.4
COMMD9-205ENST00000528608 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
COMMD9-205ENST00000528608 TIMMDC1Q9NPL8 285 aa12.57□□□□□ -0.4
COMMD9-205ENST00000528608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
COMMD9-205ENST00000528608 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
COMMD9-205ENST00000528608 ITGAEP38570 1179 aa12.56□□□□□ -0.4
COMMD9-205ENST00000528608 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
COMMD9-205ENST00000528608 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
COMMD9-205ENST00000528608 ZSCAN10Q96SZ4 725 aaPredicted RBP12.56□□□□□ -0.4
COMMD9-205ENST00000528608 ADGRL2O95490 1459 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 H7C1W4 665 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 XAGE2Q96GT9 111 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 DUOX2Q9NRD8 1548 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 ANKRD30AQ9BXX3 1397 aa12.55□□□□□ -0.4
COMMD9-205ENST00000528608 DBN1Q16643 649 aa12.54□□□□□ -0.4
COMMD9-205ENST00000528608 PLPP7Q8NBV4 271 aa12.54□□□□□ -0.4
COMMD9-205ENST00000528608 GPR25O00155 361 aa12.53□□□□□ -0.4
COMMD9-205ENST00000528608 MAP7D1Q3KQU3 841 aa12.53□□□□□ -0.4
COMMD9-205ENST00000528608 GNASQ5JWF2 1037 aa12.53□□□□□ -0.4
COMMD9-205ENST00000528608 TMEM214Q6NUQ4 689 aaKnown RBP12.53□□□□□ -0.4
COMMD9-205ENST00000528608 CLTCQ00610 1675 aaKnown RBP12.53□□□□□ -0.4
COMMD9-205ENST00000528608 C3P01024 1663 aa12.52□□□□□ -0.4
COMMD9-205ENST00000528608 RAD21O60216 631 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 STAU1O95793 577 aaKnown RBP12.52□□□□□ -0.41
COMMD9-205ENST00000528608 SLURP2P0DP57 97 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 PHKA2P46019 1235 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 GAS6Q14393 721 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 ZNF385CQ66K41 422 aaPredicted RBP12.52□□□□□ -0.41
COMMD9-205ENST00000528608 ETNK1Q9HBU6 452 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 HRH3Q9Y5N1 445 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 ZMYM3Q14202 1370 aa12.52□□□□□ -0.41
COMMD9-205ENST00000528608 MROH1Q8NDA8 1641 aa12.51□□□□□ -0.41
COMMD9-205ENST00000528608 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
COMMD9-205ENST00000528608 F11P03951 625 aa12.51□□□□□ -0.41
COMMD9-205ENST00000528608 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
COMMD9-205ENST00000528608 FHDC1Q9C0D6 1143 aaPredicted RBP12.51□□□□□ -0.41
COMMD9-205ENST00000528608 ERBINQ96RT1 1412 aa12.51□□□□□ -0.41
COMMD9-205ENST00000528608 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
COMMD9-205ENST00000528608 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
COMMD9-205ENST00000528608 EIF2AK4Q9P2K8 1649 aaKnown RBP12.51□□□□□ -0.41
COMMD9-205ENST00000528608 TLR1Q15399 786 aa12.5□□□□□ -0.41
COMMD9-205ENST00000528608 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
COMMD9-205ENST00000528608 TRERF1Q96PN7 1200 aa12.5□□□□□ -0.41
COMMD9-205ENST00000528608 MROH2AA6NES4 1674 aa12.49□□□□□ -0.41
COMMD9-205ENST00000528608 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
COMMD9-205ENST00000528608 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
COMMD9-205ENST00000528608 SRSF11Q05519 484 aaKnown RBP12.49□□□□□ -0.41
COMMD9-205ENST00000528608 FLIIQ13045 1269 aa12.49□□□□□ -0.41
COMMD9-205ENST00000528608 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
COMMD9-205ENST00000528608 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
COMMD9-205ENST00000528608 GPAMQ9HCL2 828 aa12.49□□□□□ -0.41
COMMD9-205ENST00000528608 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
COMMD9-205ENST00000528608 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 A0A1B0GTH6 734 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 GDF10P55107 478 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 C4orf17Q53FE4 359 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 ADAMTS8Q9UP79 889 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 ABCC3O15438 1527 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 KDM5DQ9BY66 1539 aa12.47□□□□□ -0.41
COMMD9-205ENST00000528608 PIK3CDO00329 1044 aa12.46□□□□□ -0.41
COMMD9-205ENST00000528608 DEPDC5O75140 1603 aa12.46□□□□□ -0.41
COMMD9-205ENST00000528608 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms