RNA–Protein interactions for RNA: ENST00000528477.1

SLC19A1-211, Transcript of solute carrier family 19 member 1, humanhuman

TSL 4

Gene SLC19A1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-211ENST00000528477 CACNA1SQ13698 1873 aa20.48■□□□□ 0.87
SLC19A1-211ENST00000528477 PIP4K2AP48426 406 aaPredicted RBP20.48■□□□□ 0.87
SLC19A1-211ENST00000528477 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
SLC19A1-211ENST00000528477 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
SLC19A1-211ENST00000528477 PASKQ96RG2 1323 aa20.48■□□□□ 0.87
SLC19A1-211ENST00000528477 CEMIPQ8WUJ3 1361 aa20.47■□□□□ 0.87
SLC19A1-211ENST00000528477 ARFGEF2Q9Y6D5 1785 aa20.47■□□□□ 0.87
SLC19A1-211ENST00000528477 FOXN1O15353 648 aa20.47■□□□□ 0.87
SLC19A1-211ENST00000528477 USP16Q9Y5T5 823 aa20.47■□□□□ 0.87
SLC19A1-211ENST00000528477 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 L3MBTL3Q96JM7 780 aaPredicted RBP20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 BCORQ6W2J9 1755 aa20.46■□□□□ 0.87
SLC19A1-211ENST00000528477 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
SLC19A1-211ENST00000528477 ST5P78524 1137 aa20.45■□□□□ 0.86
SLC19A1-211ENST00000528477 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
SLC19A1-211ENST00000528477 SOGA3Q5TF21 947 aa20.44■□□□□ 0.86
SLC19A1-211ENST00000528477 LDHDQ86WU2 507 aa20.44■□□□□ 0.86
SLC19A1-211ENST00000528477 KLRG2A4D1S0 409 aaPredicted RBP20.43■□□□□ 0.86
SLC19A1-211ENST00000528477 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
SLC19A1-211ENST00000528477 NPHP1O15259 732 aa20.43■□□□□ 0.86
SLC19A1-211ENST00000528477 ZNF541Q9H0D2 1346 aa20.43■□□□□ 0.86
SLC19A1-211ENST00000528477 SCN4AP35499 1836 aa20.42■□□□□ 0.86
SLC19A1-211ENST00000528477 IQCA1LA6NCM1 817 aa20.42■□□□□ 0.86
SLC19A1-211ENST00000528477 VEGFBP49765 207 aa20.42■□□□□ 0.86
SLC19A1-211ENST00000528477 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
SLC19A1-211ENST00000528477 CCDC93Q567U6 631 aa20.41■□□□□ 0.86
SLC19A1-211ENST00000528477 CLEC4GQ6UXB4 293 aa20.41■□□□□ 0.86
SLC19A1-211ENST00000528477 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
SLC19A1-211ENST00000528477 ZNF277Q9NRM2 450 aaPredicted RBP20.41■□□□□ 0.86
SLC19A1-211ENST00000528477 NPR1P16066 1061 aa20.4■□□□□ 0.86
SLC19A1-211ENST00000528477 FKBP4Q02790 459 aaKnown RBP eCLIP20.4■□□□□ 0.86
SLC19A1-211ENST00000528477 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
SLC19A1-211ENST00000528477 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
SLC19A1-211ENST00000528477 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.86
SLC19A1-211ENST00000528477 TMEM88BA6NKF7 163 aa20.39■□□□□ 0.85
SLC19A1-211ENST00000528477 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
SLC19A1-211ENST00000528477 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
SLC19A1-211ENST00000528477 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
SLC19A1-211ENST00000528477 RSPH6AQ9H0K4 717 aa20.39■□□□□ 0.85
SLC19A1-211ENST00000528477 NPC1L1Q9UHC9 1359 aa20.38■□□□□ 0.85
SLC19A1-211ENST00000528477 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
SLC19A1-211ENST00000528477 EAPPQ56P03 285 aaPredicted RBP20.38■□□□□ 0.85
SLC19A1-211ENST00000528477 WBP1LQ9NX94 342 aa20.37■□□□□ 0.85
SLC19A1-211ENST00000528477 FZD9O00144 591 aa20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 EPHX2P34913 555 aa20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 CTCFP49711 727 aaPredicted RBP20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 HACL1Q9UJ83 578 aa20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 SNED1Q8TER0 1413 aa20.36■□□□□ 0.85
SLC19A1-211ENST00000528477 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
SLC19A1-211ENST00000528477 HLFQ16534 295 aa20.35■□□□□ 0.85
SLC19A1-211ENST00000528477 MAP1SQ66K74 1059 aaPredicted RBP20.35■□□□□ 0.85
SLC19A1-211ENST00000528477 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
SLC19A1-211ENST00000528477 MCM10Q7L590 875 aa20.35■□□□□ 0.85
SLC19A1-211ENST00000528477 ZNF652Q9Y2D9 606 aa20.35■□□□□ 0.85
SLC19A1-211ENST00000528477 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
SLC19A1-211ENST00000528477 RTKN2Q8IZC4 609 aa20.34■□□□□ 0.85
SLC19A1-211ENST00000528477 SYNE4Q8N205 404 aa20.34■□□□□ 0.85
SLC19A1-211ENST00000528477 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
SLC19A1-211ENST00000528477 RASSF10A6NK89 507 aa20.33■□□□□ 0.85
SLC19A1-211ENST00000528477 IARSP41252 1262 aaKnown RBP20.33■□□□□ 0.85
SLC19A1-211ENST00000528477 LBX1P52954 281 aa20.33■□□□□ 0.85
SLC19A1-211ENST00000528477 DCTN1Q14203 1278 aa20.33■□□□□ 0.85
SLC19A1-211ENST00000528477 CNTROBQ8N137 903 aa20.33■□□□□ 0.85
SLC19A1-211ENST00000528477 COL4A5P29400 1685 aa20.32■□□□□ 0.84
SLC19A1-211ENST00000528477 RGL2O15211 777 aa20.32■□□□□ 0.84
SLC19A1-211ENST00000528477 CCER1Q8TC90 406 aaPredicted RBP20.32■□□□□ 0.84
SLC19A1-211ENST00000528477 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
SLC19A1-211ENST00000528477 HSPA8P11142 646 aaKnown RBP20.3■□□□□ 0.84
SLC19A1-211ENST00000528477 DEFB115Q30KQ5 88 aa20.3■□□□□ 0.84
SLC19A1-211ENST00000528477 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
SLC19A1-211ENST00000528477 PNMA8AQ86V59 439 aaPredicted RBP20.3■□□□□ 0.84
SLC19A1-211ENST00000528477 GPC2Q8N158 579 aa20.3■□□□□ 0.84
SLC19A1-211ENST00000528477 ABCC12Q96J65 1359 aa20.3■□□□□ 0.84
SLC19A1-211ENST00000528477 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
SLC19A1-211ENST00000528477 FMR1Q06787 632 aaKnown RBP eCLIP20.29■□□□□ 0.84
SLC19A1-211ENST00000528477 CRY2Q49AN0 593 aa20.29■□□□□ 0.84
SLC19A1-211ENST00000528477 LTBP1Q14766 1721 aa20.29■□□□□ 0.84
SLC19A1-211ENST00000528477 WDR33Q9C0J8 1336 aaKnown RBP20.28■□□□□ 0.84
SLC19A1-211ENST00000528477 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
SLC19A1-211ENST00000528477 PSMD1Q99460 953 aa20.28■□□□□ 0.84
SLC19A1-211ENST00000528477 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
SLC19A1-211ENST00000528477 NUTM1Q86Y26 1132 aa20.27■□□□□ 0.84
SLC19A1-211ENST00000528477 U2AF1L5P0DN76 240 aaPredicted RBP20.26■□□□□ 0.83
SLC19A1-211ENST00000528477 U2AF1Q01081 240 aaKnown RBP eCLIP20.26■□□□□ 0.83
SLC19A1-211ENST00000528477 DDX21Q9NR30 783 aaKnown RBP eCLIP20.26■□□□□ 0.83
SLC19A1-211ENST00000528477 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
SLC19A1-211ENST00000528477 EPS15P42566 896 aa20.25■□□□□ 0.83
SLC19A1-211ENST00000528477 SCNN1DP51172 638 aa20.25■□□□□ 0.83
SLC19A1-211ENST00000528477 ABHD8Q96I13 439 aa20.25■□□□□ 0.83
SLC19A1-211ENST00000528477 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
SLC19A1-211ENST00000528477 GJA3Q9Y6H8 435 aa20.25■□□□□ 0.83
SLC19A1-211ENST00000528477 HTATSF1O43719 755 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms