RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
CMTM1-210ENST00000528441 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 PXDNLA1KZ92 1463 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
CMTM1-210ENST00000528441 CHRNA5P30532 468 aa11.86□□□□□ -0.51
CMTM1-210ENST00000528441 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
CMTM1-210ENST00000528441 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
CMTM1-210ENST00000528441 ADAMTS8Q9UP79 889 aa11.86□□□□□ -0.51
CMTM1-210ENST00000528441 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
CMTM1-210ENST00000528441 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
CMTM1-210ENST00000528441 CARMIL3Q8ND23 1372 aa11.85□□□□□ -0.51
CMTM1-210ENST00000528441 DALRD3Q5D0E6 543 aaKnown RBP11.85□□□□□ -0.51
CMTM1-210ENST00000528441 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
CMTM1-210ENST00000528441 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
CMTM1-210ENST00000528441 CNBD1Q8NA66 436 aa11.85□□□□□ -0.51
CMTM1-210ENST00000528441 ZNF784Q8NCA9 323 aaPredicted RBP11.85□□□□□ -0.51
CMTM1-210ENST00000528441 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
CMTM1-210ENST00000528441 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
CMTM1-210ENST00000528441 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
CMTM1-210ENST00000528441 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
CMTM1-210ENST00000528441 H0YIN7 160 aa11.84□□□□□ -0.51
CMTM1-210ENST00000528441 TM4SF1P30408 202 aa11.84□□□□□ -0.51
CMTM1-210ENST00000528441 NBPF5PQ86XG9 351 aaPredicted RBP11.84□□□□□ -0.51
CMTM1-210ENST00000528441 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
CMTM1-210ENST00000528441 SENP3-EIF4A1A0A087X0R7 540 aa11.83□□□□□ -0.52
CMTM1-210ENST00000528441 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-210ENST00000528441 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
CMTM1-210ENST00000528441 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
CMTM1-210ENST00000528441 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
CMTM1-210ENST00000528441 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
CMTM1-210ENST00000528441 BCORQ6W2J9 1755 aa11.82□□□□□ -0.52
CMTM1-210ENST00000528441 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
CMTM1-210ENST00000528441 PDE6BP35913 854 aa11.82□□□□□ -0.52
CMTM1-210ENST00000528441 CALD1Q05682 793 aaKnown RBP11.82□□□□□ -0.52
CMTM1-210ENST00000528441 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
CMTM1-210ENST00000528441 APAF1O14727 1248 aa11.81□□□□□ -0.52
CMTM1-210ENST00000528441 AIMP1Q12904 312 aaKnown RBP11.81□□□□□ -0.52
CMTM1-210ENST00000528441 GPBP1L1Q9HC44 474 aaPredicted RBP11.81□□□□□ -0.52
CMTM1-210ENST00000528441 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
CMTM1-210ENST00000528441 NBPF26B4DH59 902 aa11.8□□□□□ -0.52
CMTM1-210ENST00000528441 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
CMTM1-210ENST00000528441 NBPF10Q6P3W6 841 aaKnown RBP11.8□□□□□ -0.52
CMTM1-210ENST00000528441 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
CMTM1-210ENST00000528441 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
CMTM1-210ENST00000528441 KIAA1551Q9HCM1 1747 aa11.8□□□□□ -0.52
CMTM1-210ENST00000528441 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 GPTP24298 496 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 BABAM1Q9NWV8 329 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
CMTM1-210ENST00000528441 SALL2Q9Y467 1007 aaPredicted RBP11.79□□□□□ -0.52
CMTM1-210ENST00000528441 ANXA1P04083 346 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 BRIP1Q9BX63 1249 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 NYXQ9GZU5 481 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 ARFGEF1Q9Y6D6 1849 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 ERBB4Q15303 1308 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 MAP3K15Q6ZN16 1313 aa11.78□□□□□ -0.52
CMTM1-210ENST00000528441 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
CMTM1-210ENST00000528441 GNAI1P63096 354 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 HLFQ16534 295 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 C9orf131Q5VYM1 1079 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 TTLL7Q6ZT98 887 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 FAM9BQ8IZU0 186 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.53
CMTM1-210ENST00000528441 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-210ENST00000528441 KCNA3P22001 575 aa11.76□□□□□ -0.53
CMTM1-210ENST00000528441 RASSF7Q02833 373 aa11.76□□□□□ -0.53
CMTM1-210ENST00000528441 KRT24Q2M2I5 525 aa11.76□□□□□ -0.53
CMTM1-210ENST00000528441 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-210ENST00000528441 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
CMTM1-210ENST00000528441 NUP98P52948 1817 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 ERVV-1B6SEH8 477 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 C21orf2O43822 256 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 CCDC184Q52MB2 194 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 PPP1R42Q7Z4L9 355 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
CMTM1-210ENST00000528441 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 CFAP44Q96MT7 982 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
CMTM1-210ENST00000528441 MBIPQ9NS73 344 aa11.75□□□□□ -0.53
CMTM1-210ENST00000528441 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 CHL1O00533 1208 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 DUSP27Q5VZP5 1158 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 COPS6Q7L5N1 327 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 IFT57Q9NWB7 429 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 UTRNP46939 3433 aa11.74□□□□□ -0.53
CMTM1-210ENST00000528441 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-210ENST00000528441 NPR1P16066 1061 aa11.73□□□□□ -0.53
CMTM1-210ENST00000528441 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.53
CMTM1-210ENST00000528441 GOLGA2Q08379 1002 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms