RNA–Protein interactions for RNA: ENST00000528427.1

GTF2H1-209, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-209ENST00000528427 IGHA1P01876 353 aa9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 EPXP11678 715 aa9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 SUZ12Q15022 739 aaKnown RBP9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
GTF2H1-209ENST00000528427 WIZO95785 1651 aa9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 MKRN1Q9UHC7 482 aaKnown RBP9.51□□□□□ -0.89
GTF2H1-209ENST00000528427 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 BICDL1Q6ZP65 573 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 SIX5Q8N196 739 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 GLMNQ92990 594 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 TSPAN10Q9H1Z9 355 aaPredicted RBP9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 MKL2Q9ULH7 1088 aa9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 BAZ1BQ9UIG0 1483 aaKnown RBP9.5□□□□□ -0.89
GTF2H1-209ENST00000528427 M0R2N6 131 aa9.49□□□□□ -0.89
GTF2H1-209ENST00000528427 COL8A1P27658 744 aa9.49□□□□□ -0.89
GTF2H1-209ENST00000528427 TOP2AP11388 1531 aaKnown RBP9.49□□□□□ -0.89
GTF2H1-209ENST00000528427 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 SERTM1A2A2V5 107 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 PALM3A6NDB9 673 aaPredicted RBP9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 RRAGCQ9HB90 399 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 AVENQ9NQS1 362 aaPredicted RBP9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 ZNF232Q9UNY5 417 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
GTF2H1-209ENST00000528427 ADH6P28332 368 aa9.47□□□□□ -0.89
GTF2H1-209ENST00000528427 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
GTF2H1-209ENST00000528427 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
GTF2H1-209ENST00000528427 ZNF468Q5VIY5 522 aaPredicted RBP9.47□□□□□ -0.89
GTF2H1-209ENST00000528427 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
GTF2H1-209ENST00000528427 GPC6Q9Y625 555 aaPredicted RBP9.47□□□□□ -0.89
GTF2H1-209ENST00000528427 KRBA1A5PL33 1030 aa9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 SFI1A8K8P3 1242 aa9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 DGKGP49619 791 aa9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 PSMA6P60900 246 aaKnown RBP9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 LRRC69Q6ZNQ3 347 aa9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 TSEN2Q8NCE0 465 aaKnown RBP9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 ZNF594Q96JF6 807 aaPredicted RBP9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 MAFBQ9Y5Q3 323 aaPredicted RBP9.46□□□□□ -0.9
GTF2H1-209ENST00000528427 C21orf2O43822 256 aa9.45□□□□□ -0.9
GTF2H1-209ENST00000528427 PROCP04070 461 aa9.45□□□□□ -0.9
GTF2H1-209ENST00000528427 AMPD1P23109 780 aa9.45□□□□□ -0.9
GTF2H1-209ENST00000528427 GRIN2CQ14957 1233 aa9.45□□□□□ -0.9
GTF2H1-209ENST00000528427 SPOCK3Q9BQ16 436 aa9.45□□□□□ -0.9
GTF2H1-209ENST00000528427 SUV39H2Q9H5I1 410 aa9.45□□□□□ -0.9
GTF2H1-209ENST00000528427 PCBP4P57723 403 aaKnown RBP9.44□□□□□ -0.9
GTF2H1-209ENST00000528427 C1orf53Q5VUE5 145 aa9.44□□□□□ -0.9
GTF2H1-209ENST00000528427 CHSY3Q70JA7 882 aa9.44□□□□□ -0.9
GTF2H1-209ENST00000528427 MDFIQ99750 246 aa9.44□□□□□ -0.9
GTF2H1-209ENST00000528427 MSTNO14793 375 aa9.43□□□□□ -0.9
GTF2H1-209ENST00000528427 RHPN1Q8TCX5 695 aa9.43□□□□□ -0.9
GTF2H1-209ENST00000528427 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
GTF2H1-209ENST00000528427 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
GTF2H1-209ENST00000528427 HCN4Q9Y3Q4 1203 aa9.42□□□□□ -0.9
GTF2H1-209ENST00000528427 GNB5O14775 395 aa9.41□□□□□ -0.9
GTF2H1-209ENST00000528427 RASA1P20936 1047 aa9.41□□□□□ -0.9
GTF2H1-209ENST00000528427 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
GTF2H1-209ENST00000528427 PPP1R12CQ9BZL4 782 aa9.41□□□□□ -0.9
GTF2H1-209ENST00000528427 PRR12Q9ULL5 1215 aa9.41□□□□□ -0.9
GTF2H1-209ENST00000528427 KANK4Q5T7N3 995 aaPredicted RBP9.4□□□□□ -0.9
GTF2H1-209ENST00000528427 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
GTF2H1-209ENST00000528427 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
GTF2H1-209ENST00000528427 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
GTF2H1-209ENST00000528427 PPP1R12BO60237 982 aaPredicted RBP9.39□□□□□ -0.91
GTF2H1-209ENST00000528427 CRTC2Q53ET0 693 aaPredicted RBP9.39□□□□□ -0.91
GTF2H1-209ENST00000528427 SYT9Q86SS6 491 aa9.39□□□□□ -0.91
GTF2H1-209ENST00000528427 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
GTF2H1-209ENST00000528427 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
GTF2H1-209ENST00000528427 SEC13P55735 322 aa9.38□□□□□ -0.91
GTF2H1-209ENST00000528427 PTK7Q13308 1070 aa9.38□□□□□ -0.91
GTF2H1-209ENST00000528427 CALR3Q96L12 384 aaKnown RBP9.38□□□□□ -0.91
GTF2H1-209ENST00000528427 NEUROD4Q9HD90 331 aa9.38□□□□□ -0.91
GTF2H1-209ENST00000528427 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
GTF2H1-209ENST00000528427 SIN3BO75182 1162 aa9.37□□□□□ -0.91
GTF2H1-209ENST00000528427 KCNQ4P56696 695 aa9.37□□□□□ -0.91
GTF2H1-209ENST00000528427 TYRO3Q06418 890 aa9.37□□□□□ -0.91
GTF2H1-209ENST00000528427 SUSD3Q96L08 255 aa9.37□□□□□ -0.91
GTF2H1-209ENST00000528427 CHMP3Q9Y3E7 222 aa9.37□□□□□ -0.91
GTF2H1-209ENST00000528427 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 ELOA3DA6NLF2 546 aaPredicted RBP9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 PIK3R2O00459 728 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 ELOA3BQ3SY89 546 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 ALDH16A1Q8IZ83 802 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 ELOA3Q8NG57 546 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 TRIM11Q96F44 468 aa9.36□□□□□ -0.91
GTF2H1-209ENST00000528427 BRD7Q9NPI1 651 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms