RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	BRIP1	Q9BX63	1249 aa		15.36	■□□□□ 0.05
PSMC3-205	ENST00000528362	MAP3K15	Q6ZN16	1313 aa		15.36	■□□□□ 0.05
PSMC3-205	ENST00000528362	LAMB4	A4D0S4	1761 aa		15.36	■□□□□ 0.05
PSMC3-205	ENST00000528362	N4BP2	Q86UW6	1770 aa	Predicted RBP	15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	ERVV-1	B6SEH8	477 aa		15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	ZNF853	P0CG23	659 aa		15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	C2CD5	Q86YS7	1000 aa		15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	MBIP	Q9NS73	344 aa		15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	NIP7	Q9Y221	180 aa	Known RBP eCLIP	15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	ADCY9	O60503	1353 aa		15.35	■□□□□ 0.05
PSMC3-205	ENST00000528362	BCOR	Q6W2J9	1755 aa		15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362	ANXA1	P04083	346 aa		15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362	KIF6	Q6ZMV9	814 aa		15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362	ARHGAP27	Q6ZUM4	889 aa		15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362	NBPF5P	Q86XG9	351 aa	Predicted RBP	15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362	NECTIN2	Q92692	538 aa		15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362	IFT57	Q9NWB7	429 aa		15.34	■□□□□ 0.05
PSMC3-205	ENST00000528362		H0YIN7	160 aa		15.33	■□□□□ 0.04
PSMC3-205	ENST00000528362	NPHP1	O15259	732 aa		15.33	■□□□□ 0.04
PSMC3-205	ENST00000528362	C1QTNF8	P60827	252 aa		15.33	■□□□□ 0.04
PSMC3-205	ENST00000528362	ST5	P78524	1137 aa		15.33	■□□□□ 0.04
PSMC3-205	ENST00000528362	ZBTB3	Q9H5J0	574 aa		15.33	■□□□□ 0.04
PSMC3-205	ENST00000528362	ATP10D	Q9P241	1426 aa		15.33	■□□□□ 0.04
PSMC3-205	ENST00000528362	SENP3-EIF4A1	A0A087X0R7	540 aa		15.32	■□□□□ 0.04
PSMC3-205	ENST00000528362	HOXB7	P09629	217 aa		15.32	■□□□□ 0.04
PSMC3-205	ENST00000528362	PDE6B	P35913	854 aa		15.32	■□□□□ 0.04
PSMC3-205	ENST00000528362	CALD1	Q05682	793 aa	Known RBP	15.32	■□□□□ 0.04
PSMC3-205	ENST00000528362	AFDN	P55196	1824 aa	Known RBP	15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	FAM177B	A6PVY3	158 aa		15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	GNAI1	P63096	354 aa		15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	DUSP27	Q5VZP5	1158 aa		15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	TTLL6	Q8N841	843 aa		15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	DDX21	Q9NR30	783 aa	Known RBP eCLIP	15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	PDZRN3	Q9UPQ7	1066 aa		15.31	■□□□□ 0.04
PSMC3-205	ENST00000528362	HDGFL1	Q5TGJ6	251 aa		15.3	■□□□□ 0.04
PSMC3-205	ENST00000528362	TPTE2	Q6XPS3	522 aa		15.3	■□□□□ 0.04
PSMC3-205	ENST00000528362	GIGYF2	Q6Y7W6	1299 aa	Known RBP	15.3	■□□□□ 0.04
PSMC3-205	ENST00000528362	UBN2	Q6ZU65	1347 aa		15.3	■□□□□ 0.04
PSMC3-205	ENST00000528362	CHPF2	Q9P2E5	772 aa		15.3	■□□□□ 0.04
PSMC3-205	ENST00000528362	BRCA1	P38398	1863 aa	Known RBP	15.29	■□□□□ 0.04
PSMC3-205	ENST00000528362	SRGN	P10124	158 aa		15.29	■□□□□ 0.04
PSMC3-205	ENST00000528362	GPT	P24298	496 aa		15.29	■□□□□ 0.04
PSMC3-205	ENST00000528362	CCDC27	Q2M243	656 aa		15.29	■□□□□ 0.04
PSMC3-205	ENST00000528362	XAGE3	Q8WTP9	111 aa		15.29	■□□□□ 0.04
PSMC3-205	ENST00000528362	ZNF622	Q969S3	477 aa	Known RBP eCLIP	15.29	■□□□□ 0.04	3e-9	■□□□□ 10.2
PSMC3-205	ENST00000528362	ABCC12	Q96J65	1359 aa		15.28	■□□□□ 0.04
PSMC3-205	ENST00000528362	KLRG2	A4D1S0	409 aa	Predicted RBP	15.28	■□□□□ 0.04
PSMC3-205	ENST00000528362	COPS6	Q7L5N1	327 aa		15.28	■□□□□ 0.04
PSMC3-205	ENST00000528362	WWC1	Q8IX03	1113 aa		15.28	■□□□□ 0.04
PSMC3-205	ENST00000528362	ZNF34	Q8IZ26	560 aa		15.28	■□□□□ 0.04
PSMC3-205	ENST00000528362	IBTK	Q9P2D0	1353 aa	Predicted RBP	15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	AIMP1	Q12904	312 aa	Known RBP	15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	SUSD4	Q5VX71	490 aa		15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	C9orf131	Q5VYM1	1079 aa		15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	STYK1	Q6J9G0	422 aa		15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	NUTM1	Q86Y26	1132 aa		15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	MASTL	Q96GX5	879 aa		15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	NYX	Q9GZU5	481 aa		15.27	■□□□□ 0.04
PSMC3-205	ENST00000528362	ELL2	O00472	640 aa	Predicted RBP	15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	NTSR2	O95665	410 aa		15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	RASSF7	Q02833	373 aa		15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	NCBP3	Q53F19	620 aa	Known RBP	15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	PRPF40B	Q6NWY9	871 aa	Known RBP	15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	C8orf58	Q8NAV2	365 aa		15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	ZNF526	Q8TF50	670 aa	Predicted RBP	15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	DBF4	Q9UBU7	674 aa	Predicted RBP	15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	ANKRD31	Q8N7Z5	1873 aa		15.26	■□□□□ 0.03
PSMC3-205	ENST00000528362	NFKBIE	O00221	500 aa		15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	C21orf2	O43822	256 aa		15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	GTF2E1	P29083	439 aa	Predicted RBP	15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	ERFE	Q4G0M1	354 aa		15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	TSR2	Q969E8	191 aa	Known RBP	15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	CNKSR1	Q969H4	720 aa		15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	COL11A2	P13942	1736 aa	Predicted RBP	15.25	■□□□□ 0.03
PSMC3-205	ENST00000528362	NPR1	P16066	1061 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	PRELP	P51888	382 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	PARP10	Q53GL7	1025 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	FAM9B	Q8IZU0	186 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	TSPYL6	Q8N831	410 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	GPBP1L1	Q9HC44	474 aa	Predicted RBP	15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	RNF181	Q9P0P0	153 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	ZNF219	Q9P2Y4	722 aa	Predicted RBP	15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	DLEC1	Q9Y238	1755 aa		15.24	■□□□□ 0.03
PSMC3-205	ENST00000528362	IL16	Q14005	1332 aa		15.23	■□□□□ 0.03
PSMC3-205	ENST00000528362	ARFGEF1	Q9Y6D6	1849 aa		15.23	■□□□□ 0.03
PSMC3-205	ENST00000528362	CRY2	Q49AN0	593 aa		15.23	■□□□□ 0.03
PSMC3-205	ENST00000528362	PLBD2	Q8NHP8	589 aa		15.23	■□□□□ 0.03
PSMC3-205	ENST00000528362	HYPK	Q9NX55	129 aa		15.23	■□□□□ 0.03
PSMC3-205	ENST00000528362	RIC1	Q4ADV7	1423 aa		15.23	■□□□□ 0.03
PSMC3-205	ENST00000528362	TCIRG1	Q13488	830 aa		15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	HSP90AB3P	Q58FF7	597 aa		15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	PPP1R42	Q7Z4L9	355 aa		15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	NLRP10	Q86W26	655 aa		15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	C7orf43	Q8WVR3	580 aa		15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	UTP14A	Q9BVJ6	771 aa	Known RBP	15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	SALL2	Q9Y467	1007 aa	Predicted RBP	15.22	■□□□□ 0.03
PSMC3-205	ENST00000528362	CEP350	Q5VT06	3117 aa		15.21	■□□□□ 0.03
PSMC3-205	ENST00000528362	LMNB1	P20700	586 aa		15.21	■□□□□ 0.03
PSMC3-205	ENST00000528362	ANKRD13D	Q6ZTN6	518 aa		15.21	■□□□□ 0.03
PSMC3-205	ENST00000528362	C3orf67	Q6ZVT6	689 aa		15.21	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms