RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNF75DP51815 510 aa17.42■□□□□ 0.38
CAPN1-214ENST00000528165 TPD52L1Q16890 204 aaPredicted RBP17.42■□□□□ 0.38
CAPN1-214ENST00000528165 LARP1BQ659C4 914 aaKnown RBP17.41■□□□□ 0.38
CAPN1-214ENST00000528165 ELP1O95163 1332 aa17.41■□□□□ 0.38
CAPN1-214ENST00000528165 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
CAPN1-214ENST00000528165 RUFY2Q8WXA3 655 aa17.41■□□□□ 0.38
CAPN1-214ENST00000528165 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
CAPN1-214ENST00000528165 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
CAPN1-214ENST00000528165 C3P01024 1663 aa17.4■□□□□ 0.38
CAPN1-214ENST00000528165 PDIA4P13667 645 aaKnown RBP17.4■□□□□ 0.38
CAPN1-214ENST00000528165 PLA2G4DQ86XP0 818 aa17.4■□□□□ 0.38
CAPN1-214ENST00000528165 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
CAPN1-214ENST00000528165 FERMT3Q86UX7 667 aa17.4■□□□□ 0.38
CAPN1-214ENST00000528165 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 NAA30Q147X3 362 aaPredicted RBP17.39■□□□□ 0.38
CAPN1-214ENST00000528165 ME3Q16798 604 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 NECAB1Q8N987 351 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.38
CAPN1-214ENST00000528165 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
CAPN1-214ENST00000528165 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
CAPN1-214ENST00000528165 ZNF592Q92610 1267 aa17.39■□□□□ 0.37
CAPN1-214ENST00000528165 TM6SF1Q9BZW5 370 aa17.39■□□□□ 0.37
CAPN1-214ENST00000528165 CLIP2Q9UDT6 1046 aa17.39■□□□□ 0.37
CAPN1-214ENST00000528165 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
CAPN1-214ENST00000528165 PDCP20941 246 aa17.39■□□□□ 0.37
CAPN1-214ENST00000528165 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
CAPN1-214ENST00000528165 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
CAPN1-214ENST00000528165 MORC2Q9Y6X9 1032 aaPredicted RBP17.39■□□□□ 0.37
CAPN1-214ENST00000528165 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 ST3GAL1Q11201 340 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 CEP135Q66GS9 1140 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 KIF18AQ8NI77 898 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 SCAND2PQ9GZW5 306 aaPredicted RBP17.38■□□□□ 0.37
CAPN1-214ENST00000528165 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 POLA2Q14181 598 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 FAM173BQ6P4H8 233 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
CAPN1-214ENST00000528165 SOX12O15370 315 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 ZKSCAN1P17029 563 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-214ENST00000528165 ZNF165P49910 485 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 PTH1RQ03431 593 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 CACTINQ8WUQ7 758 aaKnown RBP17.37■□□□□ 0.37
CAPN1-214ENST00000528165 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 NPHP3Q7Z494 1330 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 GLRX3O76003 335 aaKnown RBP17.37■□□□□ 0.37
CAPN1-214ENST00000528165 FGD1P98174 961 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
CAPN1-214ENST00000528165 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 CLSTN2Q9H4D0 955 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 NEO1Q92859 1461 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 MAP3K5Q99683 1374 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 KRT222Q8N1A0 295 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
CAPN1-214ENST00000528165 AKAP12Q02952 1782 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
CAPN1-214ENST00000528165 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
CAPN1-214ENST00000528165 RBM43Q6ZSC3 357 aaKnown RBP17.35■□□□□ 0.37
CAPN1-214ENST00000528165 ZNF397Q8NF99 534 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-214ENST00000528165 DNAJC25Q9H1X3 360 aa17.35■□□□□ 0.37
CAPN1-214ENST00000528165 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
CAPN1-214ENST00000528165 TTC41PQ6P2S7 1318 aa17.35■□□□□ 0.37
CAPN1-214ENST00000528165 FAM208AQ9UK61 1670 aaKnown RBP17.35■□□□□ 0.37
CAPN1-214ENST00000528165 HSP90AB4PQ58FF6 505 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
CAPN1-214ENST00000528165 KCNJ4P48050 445 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-214ENST00000528165 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-214ENST00000528165 KCNB2Q92953 911 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 CDC25BP30305 580 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 CCDC144BQ3MJ40 725 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
CAPN1-214ENST00000528165 BCL11BQ9C0K0 894 aaPredicted RBP17.34■□□□□ 0.37
CAPN1-214ENST00000528165 SETD1AO15047 1707 aaKnown RBP17.33■□□□□ 0.37
CAPN1-214ENST00000528165 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.37
CAPN1-214ENST00000528165 SPATA31D1Q6ZQQ2 1576 aa17.33■□□□□ 0.37
CAPN1-214ENST00000528165 OVOS2A0A0J9YW53 1432 aa17.33■□□□□ 0.37
CAPN1-214ENST00000528165 OVOS2Q6IE36 1432 aa17.33■□□□□ 0.37
CAPN1-214ENST00000528165 TERF2Q15554 542 aa17.33■□□□□ 0.36
CAPN1-214ENST00000528165 GOLGA6L19H0YKK7 550 aa17.33■□□□□ 0.36
CAPN1-214ENST00000528165 NEMFO60524 1076 aa17.33■□□□□ 0.36
CAPN1-214ENST00000528165 CAVIN2O95810 425 aa17.33■□□□□ 0.36
CAPN1-214ENST00000528165 PTPN14Q15678 1187 aa17.33■□□□□ 0.36
CAPN1-214ENST00000528165 LEO1Q8WVC0 666 aaPredicted RBP17.33■□□□□ 0.36
CAPN1-214ENST00000528165 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
CAPN1-214ENST00000528165 PEAK1Q9H792 1746 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 CCDC66A2RUB6 948 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 NECTIN1Q15223 517 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 LRRC8AQ8IWT6 810 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 METP08581 1390 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 NR1I2O75469 434 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 PSMA5P28066 241 aa17.32■□□□□ 0.36
CAPN1-214ENST00000528165 ZNF215Q9UL58 517 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms