RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 HTATSF1O43719 755 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 CYP19A1P11511 503 aaPredicted RBP15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 VEGFBP49765 207 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 FKBP8Q14318 412 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 ZNF790Q6PG37 636 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 WBP1LQ9NX94 342 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 ZBTB1Q9Y2K1 713 aa15.12■□□□□ 0.01
CCDC90B-210ENST00000528149 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
CCDC90B-210ENST00000528149 DLEC1Q9Y238 1755 aa15.11■□□□□ 0.01
CCDC90B-210ENST00000528149 HSPA8P11142 646 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-210ENST00000528149 PDE4DIPQ5VU43 2346 aa15.11■□□□□ 0.01
CCDC90B-210ENST00000528149 NFKBIEO00221 500 aa15.1■□□□□ 0.01
CCDC90B-210ENST00000528149 KRT24Q2M2I5 525 aa15.1■□□□□ 0.01
CCDC90B-210ENST00000528149 LAMB4A4D0S4 1761 aa15.1■□□□□ 0.01
CCDC90B-210ENST00000528149 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
CCDC90B-210ENST00000528149 CCDC85CA6NKD9 419 aa15.09■□□□□ 0.01
CCDC90B-210ENST00000528149 POLRMTO00411 1230 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-210ENST00000528149 RGS19P49795 217 aa15.09■□□□□ 0.01
CCDC90B-210ENST00000528149 A1BGP04217 495 aa15.08■□□□□ 0
CCDC90B-210ENST00000528149 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC90B-210ENST00000528149 TTC5Q8N0Z6 440 aa15.08■□□□□ 0
CCDC90B-210ENST00000528149 USP16Q9Y5T5 823 aa15.08■□□□□ 0
CCDC90B-210ENST00000528149 PASKQ96RG2 1323 aa15.08■□□□□ 0
CCDC90B-210ENST00000528149 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0
CCDC90B-210ENST00000528149 CANXP27824 592 aaKnown RBP15.07■□□□□ 0
CCDC90B-210ENST00000528149 CCDC27Q2M243 656 aa15.07■□□□□ 0
CCDC90B-210ENST00000528149 WWC1Q8IX03 1113 aa15.07■□□□□ 0
CCDC90B-210ENST00000528149 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
CCDC90B-210ENST00000528149 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
CCDC90B-210ENST00000528149 TNRC18O15417 2968 aaPredicted RBP15.06■□□□□ 0
CCDC90B-210ENST00000528149 TAF7Q15545 349 aaPredicted RBP15.06■□□□□ 0
CCDC90B-210ENST00000528149 DPY19L2Q6NUT2 758 aa15.06■□□□□ 0
CCDC90B-210ENST00000528149 SCN7AQ01118 1682 aa15.06■□□□□ 0
CCDC90B-210ENST00000528149 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
CCDC90B-210ENST00000528149 COL15A1P39059 1388 aa15.05■□□□□ -0
CCDC90B-210ENST00000528149 NRXN2Q9P2S2 1712 aa15.05■□□□□ -0
CCDC90B-210ENST00000528149 ZNF521Q96K83 1311 aa15.04■□□□□ -0
CCDC90B-210ENST00000528149 NBPF26B4DH59 902 aa15.04■□□□□ -0
CCDC90B-210ENST00000528149 TM4SF1P30408 202 aa15.04■□□□□ -0
CCDC90B-210ENST00000528149 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
CCDC90B-210ENST00000528149 NBPF10Q6P3W6 841 aaKnown RBP15.04■□□□□ -0
CCDC90B-210ENST00000528149 NBPF15Q8N660 670 aa15.04■□□□□ -0
CCDC90B-210ENST00000528149 FMNL2Q96PY5 1086 aa15.04■□□□□ -0
CCDC90B-210ENST00000528149 BCL2L12Q9HB09 334 aa15.04■□□□□ -0
CCDC90B-210ENST00000528149 ZNF330Q9Y3S2 320 aaPredicted RBP15.04■□□□□ -0
CCDC90B-210ENST00000528149 BCORQ6W2J9 1755 aa15.03■□□□□ -0
CCDC90B-210ENST00000528149 TMEM88BA6NKF7 163 aa15.03■□□□□ -0
CCDC90B-210ENST00000528149 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
CCDC90B-210ENST00000528149 NGEFQ8N5V2 710 aa15.03■□□□□ -0
CCDC90B-210ENST00000528149 TTLL6Q8N841 843 aa15.03■□□□□ -0
CCDC90B-210ENST00000528149 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
CCDC90B-210ENST00000528149 CALD1Q05682 793 aaKnown RBP15.02■□□□□ -0
CCDC90B-210ENST00000528149 ERFEQ4G0M1 354 aa15.02■□□□□ -0
CCDC90B-210ENST00000528149 USPL1Q5W0Q7 1092 aa15.02■□□□□ -0
CCDC90B-210ENST00000528149 NECTIN2Q92692 538 aa15.02■□□□□ -0
CCDC90B-210ENST00000528149 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
CCDC90B-210ENST00000528149 FER1L6Q2WGJ9 1857 aa15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 CARMIL3Q8ND23 1372 aa15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 DDNO94850 711 aaPredicted RBP15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 ANXA1P04083 346 aa15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 LDHDQ86WU2 507 aa15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
CCDC90B-210ENST00000528149 THSD7BQ9C0I4 1608 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 IL16Q14005 1332 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 ZNF853P0CG23 659 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 PROSER3Q2NL68 480 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 C2CD5Q86YS7 1000 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 WDR63Q8IWG1 891 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 TSR2Q969E8 191 aaKnown RBP15□□□□□ -0.01
CCDC90B-210ENST00000528149 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
CCDC90B-210ENST00000528149 MBIPQ9NS73 344 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 TBC1D2BQ9UPU7 963 aa15□□□□□ -0.01
CCDC90B-210ENST00000528149 RASSF10A6NK89 507 aa14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 CHL1O00533 1208 aa14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 ITGBL1O95965 494 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 EIF5P55010 431 aaKnown RBP14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 GNAI1P63096 354 aa14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 MAP2K1Q02750 393 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 NFIXQ14938 502 aa14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
CCDC90B-210ENST00000528149 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 WDR33Q9C0J8 1336 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 SNRPA1P09661 255 aaKnown RBP14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 ZNF219Q9P2Y4 722 aaPredicted RBP14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 SCN4AP35499 1836 aa14.98□□□□□ -0.01
CCDC90B-210ENST00000528149 COL11A2P13942 1736 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 ZPR1O75312 459 aa14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 DEFB115Q30KQ5 88 aa14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 BICDL1Q6ZP65 573 aa14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 CDCA7LQ96GN5 454 aa14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
CCDC90B-210ENST00000528149 ADAMTSL1Q8N6G6 1762 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms