RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 K7ELQ4 463 aaPredicted RBP16.06■□□□□ 0.16
RBM39-243ENST00000528062 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
RBM39-243ENST00000528062 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
RBM39-243ENST00000528062 SLC4A9Q96Q91 983 aa16.06■□□□□ 0.16
RBM39-243ENST00000528062 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
RBM39-243ENST00000528062 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
RBM39-243ENST00000528062 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
RBM39-243ENST00000528062 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
RBM39-243ENST00000528062 ILDR2Q71H61 639 aa16.04■□□□□ 0.16
RBM39-243ENST00000528062 PLEKHM2Q8IWE5 1019 aa16.04■□□□□ 0.16
RBM39-243ENST00000528062 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
RBM39-243ENST00000528062 RGPD3A6NKT7 1758 aaPredicted RBP16.04■□□□□ 0.16
RBM39-243ENST00000528062 RGPD4Q7Z3J3 1758 aa16.04■□□□□ 0.16
RBM39-243ENST00000528062 CDC45O75419 566 aa16.04■□□□□ 0.16
RBM39-243ENST00000528062 GBP4Q96PP9 640 aa16.04■□□□□ 0.16
RBM39-243ENST00000528062 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
RBM39-243ENST00000528062 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
RBM39-243ENST00000528062 SSFA2P28290 1259 aa16.03■□□□□ 0.16
RBM39-243ENST00000528062 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
RBM39-243ENST00000528062 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.16
RBM39-243ENST00000528062 CLCN1P35523 988 aa16.02■□□□□ 0.16
RBM39-243ENST00000528062 DCTPP1Q9H773 170 aa16.02■□□□□ 0.15
RBM39-243ENST00000528062 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
RBM39-243ENST00000528062 OTUD7AQ8TE49 926 aaPredicted RBP16.01■□□□□ 0.15
RBM39-243ENST00000528062 ISY1Q9ULR0 285 aaKnown RBP16.01■□□□□ 0.15
RBM39-243ENST00000528062 GIGYF1O75420 1035 aaPredicted RBP16■□□□□ 0.15
RBM39-243ENST00000528062 ERBB4Q15303 1308 aa16■□□□□ 0.15
RBM39-243ENST00000528062 KCNQ4P56696 695 aa16■□□□□ 0.15
RBM39-243ENST00000528062 TTC5Q8N0Z6 440 aa16■□□□□ 0.15
RBM39-243ENST00000528062 ATP10DQ9P241 1426 aa16■□□□□ 0.15
RBM39-243ENST00000528062 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
RBM39-243ENST00000528062 RREB1Q92766 1687 aa15.99■□□□□ 0.15
RBM39-243ENST00000528062 INTS3Q68E01 1043 aaKnown RBP15.99■□□□□ 0.15
RBM39-243ENST00000528062 FMNL2Q96PY5 1086 aa15.99■□□□□ 0.15
RBM39-243ENST00000528062 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
RBM39-243ENST00000528062 SIK1P57059 783 aa15.98■□□□□ 0.15
RBM39-243ENST00000528062 ITPK1Q13572 414 aa15.98■□□□□ 0.15
RBM39-243ENST00000528062 PROM2Q8N271 834 aa15.98■□□□□ 0.15
RBM39-243ENST00000528062 SKOR2Q2VWA4 1001 aaPredicted RBP15.98■□□□□ 0.15
RBM39-243ENST00000528062 ANKRD44Q8N8A2 993 aa15.97■□□□□ 0.15
RBM39-243ENST00000528062 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
RBM39-243ENST00000528062 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
RBM39-243ENST00000528062 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
RBM39-243ENST00000528062 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
RBM39-243ENST00000528062 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
RBM39-243ENST00000528062 APBA3O96018 575 aa15.96■□□□□ 0.15
RBM39-243ENST00000528062 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
RBM39-243ENST00000528062 SMARCA5O60264 1052 aaPredicted RBP15.96■□□□□ 0.15
RBM39-243ENST00000528062 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
RBM39-243ENST00000528062 CEP85Q6P2H3 762 aa15.96■□□□□ 0.15
RBM39-243ENST00000528062 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.14
RBM39-243ENST00000528062 CACNA1FO60840 1977 aa15.95■□□□□ 0.14
RBM39-243ENST00000528062 C4BP0C0L5 1744 aa15.95■□□□□ 0.14
RBM39-243ENST00000528062 PLSCR1O15162 318 aa15.95■□□□□ 0.14
RBM39-243ENST00000528062 SNRPA1P09661 255 aaKnown RBP15.95■□□□□ 0.14
RBM39-243ENST00000528062 RABEP1Q15276 862 aa15.95■□□□□ 0.14
RBM39-243ENST00000528062 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
RBM39-243ENST00000528062 ESPNB1AK53 854 aa15.95■□□□□ 0.14
RBM39-243ENST00000528062 TULP1O00294 542 aaPredicted RBP15.95■□□□□ 0.14
RBM39-243ENST00000528062 TUBGCP6Q96RT7 1819 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 SDSP20132 328 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 ATP6V1AP38606 617 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 APBB1O00213 710 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 HOXB7P09629 217 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 PTMSP20962 102 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 DEFB132Q7Z7B7 95 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 MEIS3Q99687 375 aa15.94■□□□□ 0.14
RBM39-243ENST00000528062 PKP1Q13835 747 aa15.93■□□□□ 0.14
RBM39-243ENST00000528062 NAP1L5Q96NT1 182 aaPredicted RBP15.93■□□□□ 0.14
RBM39-243ENST00000528062 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
RBM39-243ENST00000528062 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
RBM39-243ENST00000528062 EN1Q05925 392 aaPredicted RBP15.93■□□□□ 0.14
RBM39-243ENST00000528062 PDIA6Q15084 440 aa15.93■□□□□ 0.14
RBM39-243ENST00000528062 RPAP2Q8IXW5 612 aaPredicted RBP15.93■□□□□ 0.14
RBM39-243ENST00000528062 CAMKK2Q96RR4 588 aa15.93■□□□□ 0.14
RBM39-243ENST00000528062 CCNL1Q9UK58 526 aaPredicted RBP15.93■□□□□ 0.14
RBM39-243ENST00000528062 CYP2E1P05181 493 aaPredicted RBP15.92■□□□□ 0.14
RBM39-243ENST00000528062 EIF2S2P20042 333 aaKnown RBP15.92■□□□□ 0.14
RBM39-243ENST00000528062 PIP4K2AP48426 406 aaPredicted RBP15.92■□□□□ 0.14
RBM39-243ENST00000528062 TXNRD1Q16881 649 aa15.92■□□□□ 0.14
RBM39-243ENST00000528062 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
RBM39-243ENST00000528062 UPF1Q92900 1129 aaKnown RBP eCLIP15.92■□□□□ 0.14
RBM39-243ENST00000528062 KLHL40Q2TBA0 621 aa15.92■□□□□ 0.14
RBM39-243ENST00000528062 HDGFL1Q5TGJ6 251 aa15.92■□□□□ 0.14
RBM39-243ENST00000528062 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
RBM39-243ENST00000528062 SOS1Q07889 1333 aaPredicted RBP15.91■□□□□ 0.14
RBM39-243ENST00000528062 NBPF26B4DH59 902 aa15.91■□□□□ 0.14
RBM39-243ENST00000528062 EZH2Q15910 746 aaKnown RBP15.91■□□□□ 0.14
RBM39-243ENST00000528062 NBPF14Q5TI25 921 aa15.91■□□□□ 0.14
RBM39-243ENST00000528062 NBPF10Q6P3W6 841 aaKnown RBP15.91■□□□□ 0.14
RBM39-243ENST00000528062 NBPF15Q8N660 670 aa15.91■□□□□ 0.14
RBM39-243ENST00000528062 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
RBM39-243ENST00000528062 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
RBM39-243ENST00000528062 ANXA1P04083 346 aa15.9■□□□□ 0.14
RBM39-243ENST00000528062 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
RBM39-243ENST00000528062 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
RBM39-243ENST00000528062 A1BGP04217 495 aa15.9■□□□□ 0.14
RBM39-243ENST00000528062 INTS5Q6P9B9 1019 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms