RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 LAMB4A4D0S4 1761 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 BCORQ6W2J9 1755 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 A1BGP04217 495 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 CLEC4GQ6UXB4 293 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 NPM2Q86SE8 214 aaKnown RBP14.68□□□□□ -0.06
NR1H3-230ENST00000527949 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
NR1H3-230ENST00000527949 IQCA1LA6NCM1 817 aa14.67□□□□□ -0.06
NR1H3-230ENST00000527949 LMOD3Q0VAK6 560 aa14.67□□□□□ -0.06
NR1H3-230ENST00000527949 PRKRIP1Q9H875 184 aaPredicted RBP14.67□□□□□ -0.06
NR1H3-230ENST00000527949 DLEC1Q9Y238 1755 aa14.67□□□□□ -0.06
NR1H3-230ENST00000527949 SBF1O95248 1867 aa14.66□□□□□ -0.06
NR1H3-230ENST00000527949 CARMIL3Q8ND23 1372 aa14.66□□□□□ -0.06
NR1H3-230ENST00000527949 CAMTA2O94983 1202 aa14.66□□□□□ -0.06
NR1H3-230ENST00000527949 CNKSR1Q969H4 720 aa14.66□□□□□ -0.06
NR1H3-230ENST00000527949 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.06
NR1H3-230ENST00000527949 TAOK3Q9H2K8 898 aa14.66□□□□□ -0.06
NR1H3-230ENST00000527949 POTECB2RU33 542 aa14.65□□□□□ -0.06
NR1H3-230ENST00000527949 PRDM10Q9NQV6 1147 aa14.65□□□□□ -0.06
NR1H3-230ENST00000527949 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
NR1H3-230ENST00000527949 NPHP1O15259 732 aa14.64□□□□□ -0.07
NR1H3-230ENST00000527949 C21orf2O43822 256 aa14.64□□□□□ -0.07
NR1H3-230ENST00000527949 TMPOP42166 694 aaKnown RBP14.64□□□□□ -0.07
NR1H3-230ENST00000527949 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
NR1H3-230ENST00000527949 STYK1Q6J9G0 422 aa14.64□□□□□ -0.07
NR1H3-230ENST00000527949 DZIP3Q86Y13 1208 aaKnown RBP14.64□□□□□ -0.07
NR1H3-230ENST00000527949 AIDAQ96BJ3 306 aa14.64□□□□□ -0.07
NR1H3-230ENST00000527949 TBC1D2BQ9UPU7 963 aa14.64□□□□□ -0.07
NR1H3-230ENST00000527949 NBPF26B4DH59 902 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 ST5P78524 1137 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
NR1H3-230ENST00000527949 BICDL1Q6ZP65 573 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 LDHDQ86WU2 507 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 RUNDC1Q96C34 613 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 SETDB2Q96T68 719 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 ZNF652Q9Y2D9 606 aa14.63□□□□□ -0.07
NR1H3-230ENST00000527949 PCNTO95613 3336 aa14.62□□□□□ -0.07
NR1H3-230ENST00000527949 PRAMEF22A3QJZ6 481 aa14.62□□□□□ -0.07
NR1H3-230ENST00000527949 CTCFP49711 727 aaPredicted RBP14.62□□□□□ -0.07
NR1H3-230ENST00000527949 RIPK4P57078 832 aa14.62□□□□□ -0.07
NR1H3-230ENST00000527949 WDR43Q15061 677 aaKnown RBP eCLIP14.62□□□□□ -0.07
NR1H3-230ENST00000527949 TIAM2Q8IVF5 1701 aa14.62□□□□□ -0.07
NR1H3-230ENST00000527949 CNBD1Q8NA66 436 aa14.62□□□□□ -0.07
NR1H3-230ENST00000527949 CNTNAP1P78357 1384 aa14.61□□□□□ -0.07
NR1H3-230ENST00000527949 ANKRD31Q8N7Z5 1873 aa14.61□□□□□ -0.07
NR1H3-230ENST00000527949 PRR5LQ6MZQ0 368 aa14.61□□□□□ -0.07
NR1H3-230ENST00000527949 MASTLQ96GX5 879 aa14.61□□□□□ -0.07
NR1H3-230ENST00000527949 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
NR1H3-230ENST00000527949 MKRN1Q9UHC7 482 aaKnown RBP14.61□□□□□ -0.07
NR1H3-230ENST00000527949 ERVV-1B6SEH8 477 aa14.6□□□□□ -0.07
NR1H3-230ENST00000527949 THUMPD2Q9BTF0 503 aaKnown RBP14.6□□□□□ -0.07
NR1H3-230ENST00000527949 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
NR1H3-230ENST00000527949 ZNF330Q9Y3S2 320 aaPredicted RBP14.6□□□□□ -0.07
NR1H3-230ENST00000527949 TMEM88BA6NKF7 163 aa14.59□□□□□ -0.07
NR1H3-230ENST00000527949 DDNO94850 711 aaPredicted RBP14.59□□□□□ -0.07
NR1H3-230ENST00000527949 SRGNP10124 158 aa14.59□□□□□ -0.07
NR1H3-230ENST00000527949 PRPF40BQ6NWY9 871 aaKnown RBP14.59□□□□□ -0.07
NR1H3-230ENST00000527949 PASKQ96RG2 1323 aa14.59□□□□□ -0.07
NR1H3-230ENST00000527949 CHL1O00533 1208 aa14.58□□□□□ -0.08
NR1H3-230ENST00000527949 CCDC93Q567U6 631 aa14.58□□□□□ -0.08
NR1H3-230ENST00000527949 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
NR1H3-230ENST00000527949 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
NR1H3-230ENST00000527949 TSPYL4Q9UJ04 414 aa14.58□□□□□ -0.08
NR1H3-230ENST00000527949 ADAMTS8Q9UP79 889 aa14.58□□□□□ -0.08
NR1H3-230ENST00000527949 KLRG2A4D1S0 409 aaPredicted RBP14.57□□□□□ -0.08
NR1H3-230ENST00000527949 FOXN1O15353 648 aa14.57□□□□□ -0.08
NR1H3-230ENST00000527949 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
NR1H3-230ENST00000527949 TRIM35Q9UPQ4 493 aa14.57□□□□□ -0.08
NR1H3-230ENST00000527949 IBTKQ9P2D0 1353 aaPredicted RBP14.57□□□□□ -0.08
NR1H3-230ENST00000527949 ARFGEF2Q9Y6D5 1785 aa14.56□□□□□ -0.08
NR1H3-230ENST00000527949 HOXB7P09629 217 aa14.56□□□□□ -0.08
NR1H3-230ENST00000527949 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
NR1H3-230ENST00000527949 TPTE2Q6XPS3 522 aa14.56□□□□□ -0.08
NR1H3-230ENST00000527949 RTKN2Q8IZC4 609 aa14.56□□□□□ -0.08
NR1H3-230ENST00000527949 NUP98P52948 1817 aa14.56□□□□□ -0.08
NR1H3-230ENST00000527949 MAP3K15Q6ZN16 1313 aa14.56□□□□□ -0.08
NR1H3-230ENST00000527949 COL11A2P13942 1736 aaPredicted RBP14.55□□□□□ -0.08
NR1H3-230ENST00000527949 NPR1P16066 1061 aa14.55□□□□□ -0.08
NR1H3-230ENST00000527949 MAP2K1Q02750 393 aaPredicted RBP14.55□□□□□ -0.08
NR1H3-230ENST00000527949 LRP10Q7Z4F1 713 aa14.55□□□□□ -0.08
NR1H3-230ENST00000527949 NBPF5PQ86XG9 351 aaPredicted RBP14.55□□□□□ -0.08
NR1H3-230ENST00000527949 HACL1Q9UJ83 578 aa14.55□□□□□ -0.08
NR1H3-230ENST00000527949 RIC1Q4ADV7 1423 aa14.55□□□□□ -0.08
NR1H3-230ENST00000527949 POTEIP0CG38 1075 aa14.54□□□□□ -0.08
NR1H3-230ENST00000527949 POTEJP0CG39 1038 aa14.54□□□□□ -0.08
NR1H3-230ENST00000527949 VEGFBP49765 207 aa14.54□□□□□ -0.08
NR1H3-230ENST00000527949 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
NR1H3-230ENST00000527949 WBP1LQ9NX94 342 aa14.54□□□□□ -0.08
NR1H3-230ENST00000527949 NIP7Q9Y221 180 aaKnown RBP eCLIP14.54□□□□□ -0.08
NR1H3-230ENST00000527949 FER1L6Q2WGJ9 1857 aa14.53□□□□□ -0.08
NR1H3-230ENST00000527949 RASSF10A6NK89 507 aa14.53□□□□□ -0.08
NR1H3-230ENST00000527949 ITGBL1O95965 494 aaPredicted RBP14.53□□□□□ -0.08
NR1H3-230ENST00000527949 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
NR1H3-230ENST00000527949 PDIA6Q15084 440 aa14.53□□□□□ -0.08
NR1H3-230ENST00000527949 KIF6Q6ZMV9 814 aa14.53□□□□□ -0.08
NR1H3-230ENST00000527949 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
NR1H3-230ENST00000527949 C7orf43Q8WVR3 580 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms