RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
CAPN1-212ENST00000527887 CEP350Q5VT06 3117 aa18.67■□□□□ 0.58
CAPN1-212ENST00000527887 HSPA6P17066 643 aa18.66■□□□□ 0.58
CAPN1-212ENST00000527887 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
CAPN1-212ENST00000527887 SRGNP10124 158 aa18.65■□□□□ 0.58
CAPN1-212ENST00000527887 SOGA3Q5TF21 947 aa18.65■□□□□ 0.58
CAPN1-212ENST00000527887 MASTLQ96GX5 879 aa18.65■□□□□ 0.58
CAPN1-212ENST00000527887 THUMPD2Q9BTF0 503 aaKnown RBP18.65■□□□□ 0.58
CAPN1-212ENST00000527887 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
CAPN1-212ENST00000527887 NIP7Q9Y221 180 aaKnown RBP eCLIP18.65■□□□□ 0.58
CAPN1-212ENST00000527887 KLRG2A4D1S0 409 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-212ENST00000527887 WDR43Q15061 677 aaKnown RBP eCLIP18.63■□□□□ 0.57
CAPN1-212ENST00000527887 C16orf71Q8IYS4 520 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-212ENST00000527887 NPR1P16066 1061 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 RASSF7Q02833 373 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 KIF6Q6ZMV9 814 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 RUNDC1Q96C34 613 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 NYXQ9GZU5 481 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
CAPN1-212ENST00000527887 MAP3K15Q6ZN16 1313 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 LTBP3Q9NS15 1303 aa18.62■□□□□ 0.57
CAPN1-212ENST00000527887 NFKBIEO00221 500 aa18.61■□□□□ 0.57
CAPN1-212ENST00000527887 C21orf2O43822 256 aa18.61■□□□□ 0.57
CAPN1-212ENST00000527887 HLFQ16534 295 aa18.61■□□□□ 0.57
CAPN1-212ENST00000527887 RBM46Q8TBY0 533 aaKnown RBP18.61■□□□□ 0.57
CAPN1-212ENST00000527887 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
CAPN1-212ENST00000527887 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
CAPN1-212ENST00000527887 GLTPD2A6NH11 291 aa18.6■□□□□ 0.57
CAPN1-212ENST00000527887 GTF2E1P29083 439 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-212ENST00000527887 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-212ENST00000527887 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
CAPN1-212ENST00000527887 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
CAPN1-212ENST00000527887 KDM3BQ7LBC6 1761 aa18.59■□□□□ 0.57
CAPN1-212ENST00000527887 MYL6BP14649 208 aa18.58■□□□□ 0.56
CAPN1-212ENST00000527887 ALDH1B1P30837 517 aa18.58■□□□□ 0.56
CAPN1-212ENST00000527887 FSTL1Q12841 308 aa18.58■□□□□ 0.56
CAPN1-212ENST00000527887 DPY19L2Q6NUT2 758 aa18.58■□□□□ 0.56
CAPN1-212ENST00000527887 TAOK3Q9H2K8 898 aa18.58■□□□□ 0.56
CAPN1-212ENST00000527887 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
CAPN1-212ENST00000527887 CHL1O00533 1208 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 APLP1P51693 650 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 PRELPP51888 382 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 GIGYF2Q6Y7W6 1299 aaKnown RBP18.57■□□□□ 0.56
CAPN1-212ENST00000527887 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 C7orf43Q8WVR3 580 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 RRAGCQ9HB90 399 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
CAPN1-212ENST00000527887 ANKRD31Q8N7Z5 1873 aa18.56■□□□□ 0.56
CAPN1-212ENST00000527887 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-212ENST00000527887 LAMB4A4D0S4 1761 aa18.56■□□□□ 0.56
CAPN1-212ENST00000527887 VEGFAP15692 232 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-212ENST00000527887 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
CAPN1-212ENST00000527887 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
CAPN1-212ENST00000527887 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
CAPN1-212ENST00000527887 PARP10Q53GL7 1025 aa18.55■□□□□ 0.56
CAPN1-212ENST00000527887 CCDC93Q567U6 631 aa18.55■□□□□ 0.56
CAPN1-212ENST00000527887 ZNF219Q9P2Y4 722 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-212ENST00000527887 TRIM35Q9UPQ4 493 aa18.55■□□□□ 0.56
CAPN1-212ENST00000527887 FAM177BA6PVY3 158 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 EIF2S2P20042 333 aaKnown RBP18.54■□□□□ 0.56
CAPN1-212ENST00000527887 PDIA6Q15084 440 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 CRY2Q49AN0 593 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 LRP10Q7Z4F1 713 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 PPP1R42Q7Z4L9 355 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 ZNF34Q8IZ26 560 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 ZBTB3Q9H5J0 574 aa18.54■□□□□ 0.56
CAPN1-212ENST00000527887 SBF1O95248 1867 aa18.53■□□□□ 0.56
CAPN1-212ENST00000527887 HOXB7P09629 217 aa18.53■□□□□ 0.56
CAPN1-212ENST00000527887 RTKN2Q8IZC4 609 aa18.53■□□□□ 0.56
CAPN1-212ENST00000527887 RIC1Q4ADV7 1423 aa18.52■□□□□ 0.56
CAPN1-212ENST00000527887 HSP90AB3PQ58FF7 597 aa18.52■□□□□ 0.56
CAPN1-212ENST00000527887 CC2D2BQ6DHV5 1058 aa18.52■□□□□ 0.56
CAPN1-212ENST00000527887 SMC1BQ8NDV3 1235 aa18.52■□□□□ 0.56
CAPN1-212ENST00000527887 RNF123Q5XPI4 1314 aa18.51■□□□□ 0.55
CAPN1-212ENST00000527887 GPTP24298 496 aa18.51■□□□□ 0.55
CAPN1-212ENST00000527887 HOXA10P31260 410 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-212ENST00000527887 FKBP4Q02790 459 aaKnown RBP eCLIP18.51■□□□□ 0.55
CAPN1-212ENST00000527887 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
CAPN1-212ENST00000527887 GRIPAP1Q4V328 841 aa18.51■□□□□ 0.55
CAPN1-212ENST00000527887 SUSD4Q5VX71 490 aa18.51■□□□□ 0.55
CAPN1-212ENST00000527887 CFAP44Q96MT7 982 aa18.51■□□□□ 0.55
CAPN1-212ENST00000527887 DDX21Q9NR30 783 aaKnown RBP eCLIP18.51■□□□□ 0.55
CAPN1-212ENST00000527887 UBN2Q6ZU65 1347 aa18.5■□□□□ 0.55
CAPN1-212ENST00000527887 COL11A2P13942 1736 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-212ENST00000527887 NUTM1Q86Y26 1132 aa18.5■□□□□ 0.55
CAPN1-212ENST00000527887 NTSR2O95665 410 aa18.49■□□□□ 0.55
CAPN1-212ENST00000527887 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
CAPN1-212ENST00000527887 RPGRQ92834 1020 aaKnown RBP18.49■□□□□ 0.55
CAPN1-212ENST00000527887 LAS1LQ9Y4W2 734 aaKnown RBP18.49■□□□□ 0.55
CAPN1-212ENST00000527887 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
CAPN1-212ENST00000527887 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
CAPN1-212ENST00000527887 RBM17Q96I25 401 aaKnown RBP18.48■□□□□ 0.55
CAPN1-212ENST00000527887 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
CAPN1-212ENST00000527887 CRAMP1Q96RY5 1269 aa18.48■□□□□ 0.55
CAPN1-212ENST00000527887 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
CAPN1-212ENST00000527887 SLX4Q8IY92 1834 aa18.47■□□□□ 0.55
CAPN1-212ENST00000527887 ABCC12Q96J65 1359 aa18.47■□□□□ 0.55
CAPN1-212ENST00000527887 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms