RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 LRCH3Q96II8 777 aa10.12□□□□□ -0.79
VPS26B-204ENST00000527586 PDZRN3Q9UPQ7 1066 aa10.12□□□□□ -0.79
VPS26B-204ENST00000527586 BRCA2P51587 3418 aa10.11□□□□□ -0.79
VPS26B-204ENST00000527586 CACNA1AO00555 2505 aa10.11□□□□□ -0.79
VPS26B-204ENST00000527586 PDE6BP35913 854 aa10.11□□□□□ -0.79
VPS26B-204ENST00000527586 SCNN1DP51172 638 aa10.11□□□□□ -0.79
VPS26B-204ENST00000527586 FKBP4Q02790 459 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS26B-204ENST00000527586 CCDC93Q567U6 631 aa10.11□□□□□ -0.79
VPS26B-204ENST00000527586 STXBP5LQ9Y2K9 1186 aa10.11□□□□□ -0.79
VPS26B-204ENST00000527586 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
VPS26B-204ENST00000527586 EVC2Q86UK5 1308 aa10.1□□□□□ -0.79
VPS26B-204ENST00000527586 TBC1D8O95759 1140 aa10.1□□□□□ -0.79
VPS26B-204ENST00000527586 ZNF157P51786 506 aaPredicted RBP10.1□□□□□ -0.79
VPS26B-204ENST00000527586 SNX27Q96L92 541 aa10.1□□□□□ -0.79
VPS26B-204ENST00000527586 STAC3Q96MF2 364 aa10.1□□□□□ -0.79
VPS26B-204ENST00000527586 BRIP1Q9BX63 1249 aa10.1□□□□□ -0.79
VPS26B-204ENST00000527586 VCANP13611 3396 aa10.09□□□□□ -0.79
VPS26B-204ENST00000527586 RGPD2P0DJD1 1756 aa10.09□□□□□ -0.79
VPS26B-204ENST00000527586 FBLN1P23142 703 aa10.09□□□□□ -0.79
VPS26B-204ENST00000527586 EIF6P56537 245 aaKnown RBP10.09□□□□□ -0.79
VPS26B-204ENST00000527586 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
VPS26B-204ENST00000527586 SPTBN5Q9NRC6 3674 aaKnown RBP10.09□□□□□ -0.79
VPS26B-204ENST00000527586 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
VPS26B-204ENST00000527586 IARSP41252 1262 aaKnown RBP10.08□□□□□ -0.8
VPS26B-204ENST00000527586 STYK1Q6J9G0 422 aa10.08□□□□□ -0.8
VPS26B-204ENST00000527586 C7orf43Q8WVR3 580 aa10.08□□□□□ -0.8
VPS26B-204ENST00000527586 SBNO2Q9Y2G9 1366 aa10.08□□□□□ -0.8
VPS26B-204ENST00000527586 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 AFDNP55196 1824 aaKnown RBP10.07□□□□□ -0.8
VPS26B-204ENST00000527586 KIAA0100Q14667 2235 aaKnown RBP10.07□□□□□ -0.8
VPS26B-204ENST00000527586 GPR25O00155 361 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 SLC10A3P09131 477 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 DEFB123Q8N688 67 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 JDP2Q8WYK2 163 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 PRO3102Q9H379 93 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 ADARB2Q9NS39 739 aaKnown RBP10.07□□□□□ -0.8
VPS26B-204ENST00000527586 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
VPS26B-204ENST00000527586 MYH14Q7Z406 1995 aaKnown RBP10.06□□□□□ -0.8
VPS26B-204ENST00000527586 INTS5Q6P9B9 1019 aaKnown RBP10.06□□□□□ -0.8
VPS26B-204ENST00000527586 CDC37L1Q7L3B6 337 aa10.06□□□□□ -0.8
VPS26B-204ENST00000527586 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
VPS26B-204ENST00000527586 NARFQ9UHQ1 456 aa10.06□□□□□ -0.8
VPS26B-204ENST00000527586 COL5A3P25940 1745 aaPredicted RBP10.05□□□□□ -0.8
VPS26B-204ENST00000527586 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
VPS26B-204ENST00000527586 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
VPS26B-204ENST00000527586 DLK2Q6UY11 383 aa10.05□□□□□ -0.8
VPS26B-204ENST00000527586 Q7L0L9 218 aa10.05□□□□□ -0.8
VPS26B-204ENST00000527586 MASTLQ96GX5 879 aa10.05□□□□□ -0.8
VPS26B-204ENST00000527586 PGAP2Q9UHJ9 254 aa10.05□□□□□ -0.8
VPS26B-204ENST00000527586 PAPPA2Q9BXP8 1791 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 FKTNO75072 461 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 SRGNP10124 158 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 USP48Q86UV5 1035 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 RTKN2Q8IZC4 609 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 C2orf69Q8N8R5 385 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 DPF3Q92784 378 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 GBA2Q9HCG7 927 aaPredicted RBP10.04□□□□□ -0.8
VPS26B-204ENST00000527586 SLX4Q8IY92 1834 aa10.04□□□□□ -0.8
VPS26B-204ENST00000527586 AKAP11Q9UKA4 1901 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 PHKG2P15735 406 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 NOM1Q5C9Z4 860 aaKnown RBP10.03□□□□□ -0.8
VPS26B-204ENST00000527586 PRR5LQ6MZQ0 368 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 MON2Q7Z3U7 1717 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 TRIM17Q9Y577 477 aa10.03□□□□□ -0.8
VPS26B-204ENST00000527586 SOS1Q07889 1333 aaPredicted RBP10.03□□□□□ -0.8
VPS26B-204ENST00000527586 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.8
VPS26B-204ENST00000527586 LAMA3Q16787 3333 aa10.02□□□□□ -0.8
VPS26B-204ENST00000527586 A0A1W2PPC1 479 aa10.02□□□□□ -0.81
VPS26B-204ENST00000527586 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
VPS26B-204ENST00000527586 MTMR10Q9NXD2 777 aa10.02□□□□□ -0.81
VPS26B-204ENST00000527586 RRS1Q15050 365 aaKnown RBP10.01□□□□□ -0.81
VPS26B-204ENST00000527586 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
VPS26B-204ENST00000527586 HTTP42858 3142 aa10.01□□□□□ -0.81
VPS26B-204ENST00000527586 COL11A2P13942 1736 aaPredicted RBP10.01□□□□□ -0.81
VPS26B-204ENST00000527586 RTL1A6NKG5 1358 aa10.01□□□□□ -0.81
VPS26B-204ENST00000527586 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
VPS26B-204ENST00000527586 GPR153Q6NV75 609 aa10□□□□□ -0.81
VPS26B-204ENST00000527586 OTOP1Q7RTM1 612 aa10□□□□□ -0.81
VPS26B-204ENST00000527586 HDGFL2Q7Z4V5 671 aaPredicted RBP10□□□□□ -0.81
VPS26B-204ENST00000527586 RASAL3Q86YV0 1011 aa10□□□□□ -0.81
VPS26B-204ENST00000527586 COG3Q96JB2 828 aa10□□□□□ -0.81
VPS26B-204ENST00000527586 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
VPS26B-204ENST00000527586 NPHP1O15259 732 aa9.99□□□□□ -0.81
VPS26B-204ENST00000527586 TBC1D9BQ66K14 1250 aa9.99□□□□□ -0.81
VPS26B-204ENST00000527586 ANKRD31Q8N7Z5 1873 aa9.99□□□□□ -0.81
VPS26B-204ENST00000527586 COL15A1P39059 1388 aa9.99□□□□□ -0.81
VPS26B-204ENST00000527586 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
VPS26B-204ENST00000527586 TMEM265A0A087WTH1 108 aa9.98□□□□□ -0.81
VPS26B-204ENST00000527586 HSP90AB2PQ58FF8 381 aa9.98□□□□□ -0.81
VPS26B-204ENST00000527586 LARGE2Q8N3Y3 721 aa9.98□□□□□ -0.81
VPS26B-204ENST00000527586 TMC1Q8TDI8 760 aa9.98□□□□□ -0.81
VPS26B-204ENST00000527586 R3HDMLQ9H3Y0 253 aa9.98□□□□□ -0.81
VPS26B-204ENST00000527586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS26B-204ENST00000527586 PTPN22Q9Y2R2 807 aa9.98□□□□□ -0.81
VPS26B-204ENST00000527586 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms