RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSSCA1-204ENST00000527413 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
SSSCA1-204ENST00000527413 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
SSSCA1-204ENST00000527413 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
SSSCA1-204ENST00000527413 PRKRIP1Q9H875 184 aaPredicted RBP17.91■□□□□ 0.46
SSSCA1-204ENST00000527413 SLX4Q8IY92 1834 aa17.91■□□□□ 0.46
SSSCA1-204ENST00000527413 DICER1Q9UPY3 1922 aaKnown RBP17.9■□□□□ 0.46
SSSCA1-204ENST00000527413 ST5P78524 1137 aa17.9■□□□□ 0.46
SSSCA1-204ENST00000527413 TSPYL4Q9UJ04 414 aa17.9■□□□□ 0.46
SSSCA1-204ENST00000527413 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
SSSCA1-204ENST00000527413 RASSF7Q02833 373 aa17.89■□□□□ 0.45
SSSCA1-204ENST00000527413 RRP7AQ9Y3A4 280 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-204ENST00000527413 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-204ENST00000527413 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
SSSCA1-204ENST00000527413 RNF181Q9P0P0 153 aa17.88■□□□□ 0.45
SSSCA1-204ENST00000527413 ANKRD36CQ5JPF3 1778 aa17.88■□□□□ 0.45
SSSCA1-204ENST00000527413 KIF3CO14782 793 aa17.87■□□□□ 0.45
SSSCA1-204ENST00000527413 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSSCA1-204ENST00000527413 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
SSSCA1-204ENST00000527413 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
SSSCA1-204ENST00000527413 MYL6BP14649 208 aa17.86■□□□□ 0.45
SSSCA1-204ENST00000527413 NEUROD2Q15784 382 aa17.86■□□□□ 0.45
SSSCA1-204ENST00000527413 HLFQ16534 295 aa17.86■□□□□ 0.45
SSSCA1-204ENST00000527413 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
SSSCA1-204ENST00000527413 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
SSSCA1-204ENST00000527413 ERBB4Q15303 1308 aa17.86■□□□□ 0.45
SSSCA1-204ENST00000527413 MAP3K15Q6ZN16 1313 aa17.85■□□□□ 0.45
SSSCA1-204ENST00000527413 ERVV-1B6SEH8 477 aa17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 SRGNP10124 158 aa17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 STYK1Q6J9G0 422 aa17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 KIF6Q6ZMV9 814 aa17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
SSSCA1-204ENST00000527413 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
SSSCA1-204ENST00000527413 NFKBIEO00221 500 aa17.83■□□□□ 0.44
SSSCA1-204ENST00000527413 LMNB1P20700 586 aa17.83■□□□□ 0.44
SSSCA1-204ENST00000527413 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.44
SSSCA1-204ENST00000527413 NMRK2Q9NPI5 230 aa17.83■□□□□ 0.44
SSSCA1-204ENST00000527413 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 C21orf2O43822 256 aa17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 PRELPP51888 382 aa17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 CNKSR1Q969H4 720 aa17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 MASTLQ96GX5 879 aa17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 ZNF219Q9P2Y4 722 aaPredicted RBP17.82■□□□□ 0.44
SSSCA1-204ENST00000527413 ABCC12Q96J65 1359 aa17.81■□□□□ 0.44
SSSCA1-204ENST00000527413 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
SSSCA1-204ENST00000527413 KDM2BQ8NHM5 1336 aa17.81■□□□□ 0.44
SSSCA1-204ENST00000527413 EIF2S2P20042 333 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-204ENST00000527413 PRPF40BQ6NWY9 871 aaKnown RBP17.81■□□□□ 0.44
SSSCA1-204ENST00000527413 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
SSSCA1-204ENST00000527413 CHL1O00533 1208 aa17.8■□□□□ 0.44
SSSCA1-204ENST00000527413 PDIA6Q15084 440 aa17.8■□□□□ 0.44
SSSCA1-204ENST00000527413 LRP10Q7Z4F1 713 aa17.8■□□□□ 0.44
SSSCA1-204ENST00000527413 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
SSSCA1-204ENST00000527413 UBN2Q6ZU65 1347 aa17.79■□□□□ 0.44
SSSCA1-204ENST00000527413 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
SSSCA1-204ENST00000527413 NPR1P16066 1061 aa17.79■□□□□ 0.44
SSSCA1-204ENST00000527413 NYXQ9GZU5 481 aa17.79■□□□□ 0.44
SSSCA1-204ENST00000527413 LAMB2P55268 1798 aa17.79■□□□□ 0.44
SSSCA1-204ENST00000527413 CEP350Q5VT06 3117 aa17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 TOMM70O94826 608 aa17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 GPTP24298 496 aa17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 KRT24Q2M2I5 525 aa17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 GIGYF2Q6Y7W6 1299 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 LAS1LQ9Y4W2 734 aaKnown RBP17.78■□□□□ 0.44
SSSCA1-204ENST00000527413 ANXA1P04083 346 aa17.77■□□□□ 0.44
SSSCA1-204ENST00000527413 HSPA6P17066 643 aa17.77■□□□□ 0.44
SSSCA1-204ENST00000527413 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
SSSCA1-204ENST00000527413 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
SSSCA1-204ENST00000527413 TAOK3Q9H2K8 898 aa17.77■□□□□ 0.44
SSSCA1-204ENST00000527413 WDR90Q96KV7 1748 aa17.77■□□□□ 0.44
SSSCA1-204ENST00000527413 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
SSSCA1-204ENST00000527413 NECTIN2Q92692 538 aa17.76■□□□□ 0.43
SSSCA1-204ENST00000527413 CRY2Q49AN0 593 aa17.75■□□□□ 0.43
SSSCA1-204ENST00000527413 ERFEQ4G0M1 354 aa17.75■□□□□ 0.43
SSSCA1-204ENST00000527413 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
SSSCA1-204ENST00000527413 GLTPD2A6NH11 291 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 APAF1O14727 1248 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 NTSR2O95665 410 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 CCDC93Q567U6 631 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 SUSD4Q5VX71 490 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 C7orf43Q8WVR3 580 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 RRAGCQ9HB90 399 aa17.74■□□□□ 0.43
SSSCA1-204ENST00000527413 HOXB7P09629 217 aa17.73■□□□□ 0.43
SSSCA1-204ENST00000527413 PARP10Q53GL7 1025 aa17.73■□□□□ 0.43
SSSCA1-204ENST00000527413 RBM46Q8TBY0 533 aaKnown RBP17.73■□□□□ 0.43
SSSCA1-204ENST00000527413 XAGE3Q8WTP9 111 aa17.73■□□□□ 0.43
SSSCA1-204ENST00000527413 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
SSSCA1-204ENST00000527413 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
SSSCA1-204ENST00000527413 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
SSSCA1-204ENST00000527413 AIMP1Q12904 312 aaKnown RBP17.72■□□□□ 0.43
SSSCA1-204ENST00000527413 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
SSSCA1-204ENST00000527413 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
SSSCA1-204ENST00000527413 PPP1R42Q7Z4L9 355 aa17.72■□□□□ 0.43
SSSCA1-204ENST00000527413 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms