RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SEMA3FQ13275 785 aa7.05□□□□□ -1.28
ECHDC1-219ENST00000526299 GRIK4Q16099 956 aa7.05□□□□□ -1.28
ECHDC1-219ENST00000526299 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-219ENST00000526299 L3MBTL2Q969R5 705 aa7.05□□□□□ -1.28
ECHDC1-219ENST00000526299 SCHIP1Q9P0W5 487 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-219ENST00000526299 ADARB2-AS1A8MUL3 147 aa7.04□□□□□ -1.28
ECHDC1-219ENST00000526299 TBCELQ5QJ74 424 aa7.04□□□□□ -1.28
ECHDC1-219ENST00000526299 RAB44Q7Z6P3 723 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-219ENST00000526299 MICALL1Q8N3F8 863 aa7.04□□□□□ -1.28
ECHDC1-219ENST00000526299 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
ECHDC1-219ENST00000526299 EML1O00423 815 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 BACH1O14867 736 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 NOS2P35228 1153 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 TRIM28Q13263 835 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 TEAD4Q15561 434 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 ARTNQ5T4W7 220 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 SH3PXD2AQ5TCZ1 1133 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 TNFRSF25Q93038 417 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 ZFP64Q9NPA5 681 aa7.03□□□□□ -1.28
ECHDC1-219ENST00000526299 NID1P14543 1247 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 GTF2IP78347 998 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 WASHC4Q2M389 1173 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 PRSS36Q5K4E3 855 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 C7orf43Q8WVR3 580 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 NEUROD4Q9HD90 331 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 PRDM6Q9NQX0 595 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 ZNF232Q9UNY5 417 aa7.02□□□□□ -1.29
ECHDC1-219ENST00000526299 SKIP12755 728 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 ADH7P40394 386 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 EPHA4P54764 986 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 PSME1Q06323 249 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 SPEM2Q0P670 501 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 EML3Q32P44 896 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 SLC9A9Q8IVB4 645 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 TNS4Q8IZW8 715 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 NACC1Q96RE7 527 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
ECHDC1-219ENST00000526299 SOX11P35716 441 aa7□□□□□ -1.29
ECHDC1-219ENST00000526299 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
ECHDC1-219ENST00000526299 C20orf204Q6ZNR8 217 aa6.99□□□□□ -1.29
ECHDC1-219ENST00000526299 RHPN1Q8TCX5 695 aa6.99□□□□□ -1.29
ECHDC1-219ENST00000526299 SERTM1A2A2V5 107 aa6.98□□□□□ -1.29
ECHDC1-219ENST00000526299 NCOA4Q13772 614 aa6.98□□□□□ -1.29
ECHDC1-219ENST00000526299 HSH2DQ96JZ2 352 aa6.98□□□□□ -1.29
ECHDC1-219ENST00000526299 C9orf172C9J069 976 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 SELPP16109 830 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 NEUROD1Q13562 356 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 MBTPS1Q14703 1052 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 NBPF11Q86T75 865 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 DEPDC4Q8N2C3 294 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 CEP63Q96MT8 703 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 BRD7Q9NPI1 651 aa6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 GPC6Q9Y625 555 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-219ENST00000526299 SFI1A8K8P3 1242 aa6.96□□□□□ -1.3
ECHDC1-219ENST00000526299 ADGRE1Q14246 886 aa6.96□□□□□ -1.3
ECHDC1-219ENST00000526299 KRTAP4-12Q9BQ66 201 aa6.96□□□□□ -1.3
ECHDC1-219ENST00000526299 HCN4Q9Y3Q4 1203 aa6.96□□□□□ -1.3
ECHDC1-219ENST00000526299 A0A0A0MRY4 1105 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 LILRB5O75023 590 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 TBC1D8BQ0IIM8 1120 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 LCE3BQ5TA77 95 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 ZNF280CQ8ND82 737 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 KCNH4Q9UQ05 1017 aa6.95□□□□□ -1.3
ECHDC1-219ENST00000526299 LZTS3O60299 673 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 H2AFB1P0C5Y9 115 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 H2AFB2P0C5Z0 115 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 TYRO3Q06418 890 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 BHMTQ93088 406 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 PHACTR1Q9C0D0 580 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 TSPAN10Q9H1Z9 355 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 ALG2Q9H553 416 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 KIAA1024Q9UPX6 916 aa6.94□□□□□ -1.3
ECHDC1-219ENST00000526299 USP17L5A8MUK1 530 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 ZBTB7BO15156 539 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 ELNP15502 786 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 KCNQ4P56696 695 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 PSMA6P60900 246 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 LRP8Q14114 963 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 C1orf53Q5VUE5 145 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 TXNRD3Q86VQ6 643 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 TPCN2Q8NHX9 752 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 NUDT8Q8WV74 236 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 SUSD3Q96L08 255 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 UBE2OQ9C0C9 1292 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 IGFLR1Q9H665 355 aa6.93□□□□□ -1.3
ECHDC1-219ENST00000526299 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 MCM6Q14566 821 aa6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 NFATC2IPQ8NCF5 419 aa6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 TP53INP1Q96A56 240 aa6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 LENG1Q96BZ8 264 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 JPH1Q9HDC5 661 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 COG6Q9Y2V7 657 aa6.92□□□□□ -1.3
ECHDC1-219ENST00000526299 RAC1P63000 192 aa6.91□□□□□ -1.3
ECHDC1-219ENST00000526299 SLC6A14Q9UN76 642 aa6.91□□□□□ -1.3
ECHDC1-219ENST00000526299 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-219ENST00000526299 NRG1Q02297 640 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-219ENST00000526299 CCDC102BQ68D86 513 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms