RNA–Protein interactions for RNA: ENST00000526193.5

RBBP4-217, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 4

Gene RBBP4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-217ENST00000526193 CRY2Q49AN0 593 aa11.24□□□□□ -0.61
RBBP4-217ENST00000526193 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
RBBP4-217ENST00000526193 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 VEGFAP15692 232 aaPredicted RBP11.23□□□□□ -0.61
RBBP4-217ENST00000526193 NPR1P16066 1061 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 CC2D2BQ6DHV5 1058 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 NBPF5PQ86XG9 351 aaPredicted RBP11.23□□□□□ -0.61
RBBP4-217ENST00000526193 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 WWC3Q9ULE0 1092 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 RNF123Q5XPI4 1314 aa11.23□□□□□ -0.61
RBBP4-217ENST00000526193 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
RBBP4-217ENST00000526193 HOXB7P09629 217 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 ALDH1B1P30837 517 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
RBBP4-217ENST00000526193 CCDC88AQ3V6T2 1871 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 MAP3K15Q6ZN16 1313 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 BICDL1Q6ZP65 573 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 ZNF526Q8TF50 670 aaPredicted RBP11.22□□□□□ -0.61
RBBP4-217ENST00000526193 NMRK2Q9NPI5 230 aa11.22□□□□□ -0.61
RBBP4-217ENST00000526193 PRAMEF22A3QJZ6 481 aa11.21□□□□□ -0.61
RBBP4-217ENST00000526193 CHL1O00533 1208 aa11.21□□□□□ -0.61
RBBP4-217ENST00000526193 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
RBBP4-217ENST00000526193 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.61
RBBP4-217ENST00000526193 LRP10Q7Z4F1 713 aa11.21□□□□□ -0.61
RBBP4-217ENST00000526193 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.61
RBBP4-217ENST00000526193 DNAJC5GQ8N7S2 189 aa11.21□□□□□ -0.61
RBBP4-217ENST00000526193 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
RBBP4-217ENST00000526193 NIP7Q9Y221 180 aaKnown RBP eCLIP11.21□□□□□ -0.61
RBBP4-217ENST00000526193 SBF1O95248 1867 aa11.21□□□□□ -0.62
RBBP4-217ENST00000526193 PRELPP51888 382 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 RIPK4P57078 832 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 NCBP3Q53F19 620 aaKnown RBP11.2□□□□□ -0.62
RBBP4-217ENST00000526193 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 SLC10A5Q5PT55 438 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 IFFO2Q5TF58 517 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 PRPF40BQ6NWY9 871 aaKnown RBP11.2□□□□□ -0.62
RBBP4-217ENST00000526193 ZNF34Q8IZ26 560 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
RBBP4-217ENST00000526193 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
RBBP4-217ENST00000526193 PCNTO95613 3336 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 CCDC93Q567U6 631 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 GIGYF2Q6Y7W6 1299 aaKnown RBP11.19□□□□□ -0.62
RBBP4-217ENST00000526193 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 C16orf71Q8IYS4 520 aaPredicted RBP11.19□□□□□ -0.62
RBBP4-217ENST00000526193 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.623e-23■□□□□ 8.3
RBBP4-217ENST00000526193 RUNDC1Q96C34 613 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
RBBP4-217ENST00000526193 PSMD1Q99460 953 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 CHMP4AQ9BY43 222 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 VPS33BQ9H267 617 aa11.19□□□□□ -0.62
RBBP4-217ENST00000526193 KDM3BQ7LBC6 1761 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 NPHP1O15259 732 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 C21orf2O43822 256 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 PDIA6Q15084 440 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 HLFQ16534 295 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 HSP90AB3PQ58FF7 597 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 MIS18AQ9NYP9 233 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 ANKRD31Q8N7Z5 1873 aa11.18□□□□□ -0.62
RBBP4-217ENST00000526193 FKBP4Q02790 459 aaKnown RBP eCLIP11.17□□□□□ -0.62
RBBP4-217ENST00000526193 RASSF7Q02833 373 aa11.17□□□□□ -0.62
RBBP4-217ENST00000526193 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
RBBP4-217ENST00000526193 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
RBBP4-217ENST00000526193 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
RBBP4-217ENST00000526193 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
RBBP4-217ENST00000526193 TNRC6CQ9HCJ0 1690 aaKnown RBP11.17□□□□□ -0.62
RBBP4-217ENST00000526193 SNED1Q8TER0 1413 aa11.17□□□□□ -0.62
RBBP4-217ENST00000526193 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
RBBP4-217ENST00000526193 IQCA1LA6NCM1 817 aa11.16□□□□□ -0.62
RBBP4-217ENST00000526193 POTECB2RU33 542 aa11.16□□□□□ -0.62
RBBP4-217ENST00000526193 CALD1Q05682 793 aaKnown RBP11.16□□□□□ -0.62
RBBP4-217ENST00000526193 DDX10Q13206 875 aaKnown RBP11.16□□□□□ -0.62
RBBP4-217ENST00000526193 PPP1R42Q7Z4L9 355 aa11.16□□□□□ -0.62
RBBP4-217ENST00000526193 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
RBBP4-217ENST00000526193 DDX21Q9NR30 783 aaKnown RBP eCLIP11.16□□□□□ -0.62
RBBP4-217ENST00000526193 FER1L6Q2WGJ9 1857 aa11.16□□□□□ -0.62
RBBP4-217ENST00000526193 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.62
RBBP4-217ENST00000526193 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.62
RBBP4-217ENST00000526193 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
RBBP4-217ENST00000526193 TTLL7Q6ZT98 887 aa11.15□□□□□ -0.62
RBBP4-217ENST00000526193 THUMPD2Q9BTF0 503 aaKnown RBP11.15□□□□□ -0.62
RBBP4-217ENST00000526193 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
RBBP4-217ENST00000526193 WDR90Q96KV7 1748 aa11.15□□□□□ -0.63
RBBP4-217ENST00000526193 ARFGEF2Q9Y6D5 1785 aa11.14□□□□□ -0.63
RBBP4-217ENST00000526193 FZD9O00144 591 aa11.14□□□□□ -0.63
RBBP4-217ENST00000526193 NTSR2O95665 410 aa11.14□□□□□ -0.63
RBBP4-217ENST00000526193 ZNF853P0CG23 659 aa11.14□□□□□ -0.63
RBBP4-217ENST00000526193 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
RBBP4-217ENST00000526193 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
RBBP4-217ENST00000526193 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
RBBP4-217ENST00000526193 RRP7AQ9Y3A4 280 aaKnown RBP11.14□□□□□ -0.63
RBBP4-217ENST00000526193 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
RBBP4-217ENST00000526193 UBN2Q6ZU65 1347 aa11.13□□□□□ -0.63
RBBP4-217ENST00000526193 BBOX1O75936 387 aa11.13□□□□□ -0.63
RBBP4-217ENST00000526193 TCIRG1Q13488 830 aa11.13□□□□□ -0.63
RBBP4-217ENST00000526193 SUSD4Q5VX71 490 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms