RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 MYL6BP14649 208 aa22.31■■□□□ 1.16
LMX1B-203ENST00000526117 PROSER3Q2NL68 480 aa22.31■■□□□ 1.16
LMX1B-203ENST00000526117 KIF6Q6ZMV9 814 aa22.31■■□□□ 1.16
LMX1B-203ENST00000526117 HYPKQ9NX55 129 aa22.31■■□□□ 1.16
LMX1B-203ENST00000526117 CHPF2Q9P2E5 772 aa22.31■■□□□ 1.16
LMX1B-203ENST00000526117 CCDC30Q5VVM6 783 aa22.3■■□□□ 1.16
LMX1B-203ENST00000526117 TBC1D9BQ66K14 1250 aa22.3■■□□□ 1.16
LMX1B-203ENST00000526117 TSPYL6Q8N831 410 aa22.3■■□□□ 1.16
LMX1B-203ENST00000526117 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
LMX1B-203ENST00000526117 E9PSI1 815 aa22.29■■□□□ 1.16
LMX1B-203ENST00000526117 TWISTNBQ3B726 338 aaPredicted RBP22.29■■□□□ 1.16
LMX1B-203ENST00000526117 TTLL7Q6ZT98 887 aa22.29■■□□□ 1.16
LMX1B-203ENST00000526117 KIAA1551Q9HCM1 1747 aa22.28■■□□□ 1.16
LMX1B-203ENST00000526117 NUP98P52948 1817 aa22.28■■□□□ 1.16
LMX1B-203ENST00000526117 NECTIN2Q92692 538 aa22.27■■□□□ 1.16
LMX1B-203ENST00000526117 SETDB2Q96T68 719 aa22.27■■□□□ 1.16
LMX1B-203ENST00000526117 IBTKQ9P2D0 1353 aaPredicted RBP22.26■■□□□ 1.15
LMX1B-203ENST00000526117 ELL2O00472 640 aaPredicted RBP22.26■■□□□ 1.15
LMX1B-203ENST00000526117 SERPINB2P05120 415 aa22.26■■□□□ 1.15
LMX1B-203ENST00000526117 TGFB2P61812 414 aa22.26■■□□□ 1.15
LMX1B-203ENST00000526117 SLFN5Q08AF3 891 aa22.26■■□□□ 1.15
LMX1B-203ENST00000526117 GIGYF2Q6Y7W6 1299 aaKnown RBP22.26■■□□□ 1.15
LMX1B-203ENST00000526117 COPS6Q7L5N1 327 aa22.26■■□□□ 1.15
LMX1B-203ENST00000526117 ANXA1P04083 346 aa22.25■■□□□ 1.15
LMX1B-203ENST00000526117 EXOSC9Q06265 439 aaKnown RBP22.25■■□□□ 1.15
LMX1B-203ENST00000526117 HLFQ16534 295 aa22.25■■□□□ 1.15
LMX1B-203ENST00000526117 TRMT2AQ8IZ69 625 aaKnown RBP22.25■■□□□ 1.15
LMX1B-203ENST00000526117 XAGE3Q8WTP9 111 aa22.25■■□□□ 1.15
LMX1B-203ENST00000526117 PXDNLA1KZ92 1463 aa22.24■■□□□ 1.15
LMX1B-203ENST00000526117 VAMP4O75379 141 aa22.24■■□□□ 1.15
LMX1B-203ENST00000526117 NLGN2Q8NFZ4 835 aa22.24■■□□□ 1.15
LMX1B-203ENST00000526117 ANKRD36CQ5JPF3 1778 aa22.24■■□□□ 1.15
LMX1B-203ENST00000526117 CACNA1FO60840 1977 aa22.23■■□□□ 1.15
LMX1B-203ENST00000526117 HSP90AB3PQ58FF7 597 aa22.22■■□□□ 1.15
LMX1B-203ENST00000526117 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
LMX1B-203ENST00000526117 ZNF34Q8IZ26 560 aa22.22■■□□□ 1.15
LMX1B-203ENST00000526117 PLBD2Q8NHP8 589 aa22.22■■□□□ 1.15
LMX1B-203ENST00000526117 STK31Q9BXU1 1019 aa22.22■■□□□ 1.15
LMX1B-203ENST00000526117 ZBTB3Q9H5J0 574 aa22.22■■□□□ 1.15
LMX1B-203ENST00000526117 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
LMX1B-203ENST00000526117 ANKRD13DQ6ZTN6 518 aa22.21■■□□□ 1.15
LMX1B-203ENST00000526117 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
LMX1B-203ENST00000526117 PDZRN3Q9UPQ7 1066 aa22.21■■□□□ 1.15
LMX1B-203ENST00000526117 PRR5LQ6MZQ0 368 aa22.2■■□□□ 1.14
LMX1B-203ENST00000526117 ZNF428Q96B54 188 aa22.2■■□□□ 1.14
LMX1B-203ENST00000526117 RIC1Q4ADV7 1423 aa22.2■■□□□ 1.14
LMX1B-203ENST00000526117 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
LMX1B-203ENST00000526117 AIMP1Q12904 312 aaKnown RBP22.19■■□□□ 1.14
LMX1B-203ENST00000526117 PARP10Q53GL7 1025 aa22.19■■□□□ 1.14
LMX1B-203ENST00000526117 CNBD1Q8NA66 436 aa22.19■■□□□ 1.14
LMX1B-203ENST00000526117 RNF123Q5XPI4 1314 aa22.19■■□□□ 1.14
LMX1B-203ENST00000526117 BRCA1P38398 1863 aaKnown RBP22.18■■□□□ 1.14
LMX1B-203ENST00000526117 DLEC1Q9Y238 1755 aa22.18■■□□□ 1.14
LMX1B-203ENST00000526117 UBN2Q6ZU65 1347 aa22.18■■□□□ 1.14
LMX1B-203ENST00000526117 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
LMX1B-203ENST00000526117 TPTE2Q6XPS3 522 aa22.18■■□□□ 1.14
LMX1B-203ENST00000526117 NBPF5PQ86XG9 351 aaPredicted RBP22.18■■□□□ 1.14
LMX1B-203ENST00000526117 BRIP1Q9BX63 1249 aa22.18■■□□□ 1.14
LMX1B-203ENST00000526117 NYXQ9GZU5 481 aa22.18■■□□□ 1.14
LMX1B-203ENST00000526117 ANKRD31Q8N7Z5 1873 aa22.17■■□□□ 1.14
LMX1B-203ENST00000526117 DDX58O95786 925 aaKnown RBP22.17■■□□□ 1.14
LMX1B-203ENST00000526117 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
LMX1B-203ENST00000526117 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
LMX1B-203ENST00000526117 ST5P78524 1137 aa22.16■■□□□ 1.14
LMX1B-203ENST00000526117 HNRNPUQ00839 825 aaKnown RBP eCLIP22.16■■□□□ 1.14
LMX1B-203ENST00000526117 TRIM28Q13263 835 aaKnown RBP22.16■■□□□ 1.14
LMX1B-203ENST00000526117 CDCA7LQ96GN5 454 aa22.16■■□□□ 1.14
LMX1B-203ENST00000526117 N4BP2Q86UW6 1770 aaPredicted RBP22.16■■□□□ 1.14
LMX1B-203ENST00000526117 GOLGB1Q14789 3259 aaKnown RBP22.16■■□□□ 1.14
LMX1B-203ENST00000526117 ZBED9Q6R2W3 1325 aa22.15■■□□□ 1.14
LMX1B-203ENST00000526117 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
LMX1B-203ENST00000526117 SLC4A2P04920 1241 aa22.15■■□□□ 1.14
LMX1B-203ENST00000526117 KCNA3P22001 575 aa22.15■■□□□ 1.14
LMX1B-203ENST00000526117 PDE6BP35913 854 aa22.15■■□□□ 1.14
LMX1B-203ENST00000526117 KLRG2A4D1S0 409 aaPredicted RBP22.14■■□□□ 1.13
LMX1B-203ENST00000526117 PPP1R42Q7Z4L9 355 aa22.14■■□□□ 1.13
LMX1B-203ENST00000526117 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.13
LMX1B-203ENST00000526117 NTSR2O95665 410 aa22.13■■□□□ 1.13
LMX1B-203ENST00000526117 DPEP1P16444 411 aa22.13■■□□□ 1.13
LMX1B-203ENST00000526117 FLIIQ13045 1269 aa22.12■■□□□ 1.13
LMX1B-203ENST00000526117 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
LMX1B-203ENST00000526117 KSR2Q6VAB6 950 aa22.12■■□□□ 1.13
LMX1B-203ENST00000526117 NLRP10Q86W26 655 aa22.12■■□□□ 1.13
LMX1B-203ENST00000526117 ADCY9O60503 1353 aa22.12■■□□□ 1.13
LMX1B-203ENST00000526117 A0A0G2JLW4 131 aa22.11■■□□□ 1.13
LMX1B-203ENST00000526117 GPTP24298 496 aa22.11■■□□□ 1.13
LMX1B-203ENST00000526117 RIC3Q7Z5B4 369 aa22.11■■□□□ 1.13
LMX1B-203ENST00000526117 COL11A2P13942 1736 aaPredicted RBP22.11■■□□□ 1.13
LMX1B-203ENST00000526117 NPHP1O15259 732 aa22.1■■□□□ 1.13
LMX1B-203ENST00000526117 METTL22Q9BUU2 404 aaPredicted RBP22.1■■□□□ 1.13
LMX1B-203ENST00000526117 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
LMX1B-203ENST00000526117 PIM2Q9P1W9 311 aa22.1■■□□□ 1.13
LMX1B-203ENST00000526117 ARFGEF1Q9Y6D6 1849 aa22.09■■□□□ 1.13
LMX1B-203ENST00000526117 H0YIN7 160 aa22.09■■□□□ 1.13
LMX1B-203ENST00000526117 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
LMX1B-203ENST00000526117 SLC10A5Q5PT55 438 aa22.09■■□□□ 1.13
LMX1B-203ENST00000526117 G2E3Q7L622 706 aa22.09■■□□□ 1.13
LMX1B-203ENST00000526117 PI4KAP2A4QPH2 592 aa22.08■■□□□ 1.13
LMX1B-203ENST00000526117 TCERG1O14776 1098 aaKnown RBP22.08■■□□□ 1.13
LMX1B-203ENST00000526117 GRIN3BO60391 1043 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms