RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
SSBP3-210ENST00000525990 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
SSBP3-210ENST00000525990 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
SSBP3-210ENST00000525990 ANKRD36CQ5JPF3 1778 aa15.91■□□□□ 0.14
SSBP3-210ENST00000525990 FAM177BA6PVY3 158 aa15.91■□□□□ 0.14
SSBP3-210ENST00000525990 H0YIN7 160 aa15.91■□□□□ 0.14
SSBP3-210ENST00000525990 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
SSBP3-210ENST00000525990 TTLL6Q8N841 843 aa15.91■□□□□ 0.14
SSBP3-210ENST00000525990 ZNF622Q969S3 477 aaKnown RBP eCLIP15.91■□□□□ 0.14
SSBP3-210ENST00000525990 NFKBIEO00221 500 aa15.9■□□□□ 0.14
SSBP3-210ENST00000525990 TTLL7Q6ZT98 887 aa15.9■□□□□ 0.14
SSBP3-210ENST00000525990 PNISRQ8TF01 805 aaKnown RBP15.9■□□□□ 0.14
SSBP3-210ENST00000525990 BRIP1Q9BX63 1249 aa15.9■□□□□ 0.14
SSBP3-210ENST00000525990 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
SSBP3-210ENST00000525990 TSPYL4Q9UJ04 414 aa15.9■□□□□ 0.14
SSBP3-210ENST00000525990 NPHP1O15259 732 aa15.89■□□□□ 0.13
SSBP3-210ENST00000525990 MYL6BP14649 208 aa15.89■□□□□ 0.13
SSBP3-210ENST00000525990 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-210ENST00000525990 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSBP3-210ENST00000525990 PDE6BP35913 854 aa15.88■□□□□ 0.13
SSBP3-210ENST00000525990 KRT24Q2M2I5 525 aa15.88■□□□□ 0.13
SSBP3-210ENST00000525990 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
SSBP3-210ENST00000525990 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
SSBP3-210ENST00000525990 LAMB2P55268 1798 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 C21orf2O43822 256 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 ANXA1P04083 346 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 ST5P78524 1137 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 CLEC4GQ6UXB4 293 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 ZBTB3Q9H5J0 574 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 TRIM35Q9UPQ4 493 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 ZNF652Q9Y2D9 606 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
SSBP3-210ENST00000525990 SRGNP10124 158 aa15.86■□□□□ 0.13
SSBP3-210ENST00000525990 PROSER3Q2NL68 480 aa15.86■□□□□ 0.13
SSBP3-210ENST00000525990 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
SSBP3-210ENST00000525990 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
SSBP3-210ENST00000525990 PDIA6Q15084 440 aa15.85■□□□□ 0.13
SSBP3-210ENST00000525990 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
SSBP3-210ENST00000525990 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
SSBP3-210ENST00000525990 NECTIN2Q92692 538 aa15.85■□□□□ 0.13
SSBP3-210ENST00000525990 RUNDC1Q96C34 613 aa15.85■□□□□ 0.13
SSBP3-210ENST00000525990 MAP3K15Q6ZN16 1313 aa15.85■□□□□ 0.13
SSBP3-210ENST00000525990 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
SSBP3-210ENST00000525990 LMNB1P20700 586 aa15.84■□□□□ 0.13
SSBP3-210ENST00000525990 GPTP24298 496 aa15.84■□□□□ 0.13
SSBP3-210ENST00000525990 OLFM4Q6UX06 510 aa15.84■□□□□ 0.13
SSBP3-210ENST00000525990 NUTM1Q86Y26 1132 aa15.84■□□□□ 0.13
SSBP3-210ENST00000525990 WDR90Q96KV7 1748 aa15.83■□□□□ 0.13
SSBP3-210ENST00000525990 CCDC184Q52MB2 194 aa15.83■□□□□ 0.12
SSBP3-210ENST00000525990 STYK1Q6J9G0 422 aa15.83■□□□□ 0.12
SSBP3-210ENST00000525990 SLC51AQ86UW1 340 aa15.83■□□□□ 0.12
SSBP3-210ENST00000525990 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
SSBP3-210ENST00000525990 TAF1P21675 1872 aa15.82■□□□□ 0.12
SSBP3-210ENST00000525990 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
SSBP3-210ENST00000525990 KIF6Q6ZMV9 814 aa15.82■□□□□ 0.12
SSBP3-210ENST00000525990 MASTLQ96GX5 879 aa15.82■□□□□ 0.12
SSBP3-210ENST00000525990 RRAGCQ9HB90 399 aa15.82■□□□□ 0.12
SSBP3-210ENST00000525990 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
SSBP3-210ENST00000525990 HSPA6P17066 643 aa15.81■□□□□ 0.12
SSBP3-210ENST00000525990 ERFEQ4G0M1 354 aa15.81■□□□□ 0.12
SSBP3-210ENST00000525990 TPTE2Q6XPS3 522 aa15.81■□□□□ 0.12
SSBP3-210ENST00000525990 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
SSBP3-210ENST00000525990 ERBB4Q15303 1308 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 KLRG2A4D1S0 409 aaPredicted RBP15.8■□□□□ 0.12
SSBP3-210ENST00000525990 CHL1O00533 1208 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 RGL2O15211 777 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 TOMM70O94826 608 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 SUSD4Q5VX71 490 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 CNKSR1Q969H4 720 aa15.8■□□□□ 0.12
SSBP3-210ENST00000525990 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
SSBP3-210ENST00000525990 APAF1O14727 1248 aa15.79■□□□□ 0.12
SSBP3-210ENST00000525990 NPR1P16066 1061 aa15.79■□□□□ 0.12
SSBP3-210ENST00000525990 GTF2E1P29083 439 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-210ENST00000525990 C3orf67Q6ZVT6 689 aa15.79■□□□□ 0.12
SSBP3-210ENST00000525990 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
SSBP3-210ENST00000525990 C7orf43Q8WVR3 580 aa15.79■□□□□ 0.12
SSBP3-210ENST00000525990 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
SSBP3-210ENST00000525990 NTSR2O95665 410 aa15.78■□□□□ 0.12
SSBP3-210ENST00000525990 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
SSBP3-210ENST00000525990 GIGYF2Q6Y7W6 1299 aaKnown RBP15.78■□□□□ 0.12
SSBP3-210ENST00000525990 BABAM1Q9NWV8 329 aa15.78■□□□□ 0.12
SSBP3-210ENST00000525990 LTBP3Q9NS15 1303 aa15.77■□□□□ 0.12
SSBP3-210ENST00000525990 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
SSBP3-210ENST00000525990 XAGE3Q8WTP9 111 aa15.77■□□□□ 0.12
SSBP3-210ENST00000525990 TAOK3Q9H2K8 898 aa15.77■□□□□ 0.12
SSBP3-210ENST00000525990 CHPF2Q9P2E5 772 aa15.77■□□□□ 0.12
SSBP3-210ENST00000525990 SNED1Q8TER0 1413 aa15.77■□□□□ 0.11
SSBP3-210ENST00000525990 CEP350Q5VT06 3117 aa15.77■□□□□ 0.11
SSBP3-210ENST00000525990 COL4A5P29400 1685 aa15.76■□□□□ 0.11
SSBP3-210ENST00000525990 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
SSBP3-210ENST00000525990 POTECB2RU33 542 aa15.76■□□□□ 0.11
SSBP3-210ENST00000525990 CRY2Q49AN0 593 aa15.76■□□□□ 0.11
SSBP3-210ENST00000525990 COPS6Q7L5N1 327 aa15.76■□□□□ 0.11
SSBP3-210ENST00000525990 MBIPQ9NS73 344 aa15.76■□□□□ 0.11
SSBP3-210ENST00000525990 RIC1Q4ADV7 1423 aa15.76■□□□□ 0.11
SSBP3-210ENST00000525990 IBTKQ9P2D0 1353 aaPredicted RBP15.75■□□□□ 0.11
SSBP3-210ENST00000525990 HTRA3P83110 453 aa15.75■□□□□ 0.11
SSBP3-210ENST00000525990 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
SSBP3-210ENST00000525990 NYXQ9GZU5 481 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms