RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 NPM2Q86SE8 214 aaKnown RBP28.06■■■□□ 2.08
PACSIN3-203ENST00000525725 KDM2BQ8NHM5 1336 aa28.06■■■□□ 2.08
PACSIN3-203ENST00000525725 PNISRQ8TF01 805 aaKnown RBP28.05■■■□□ 2.08
PACSIN3-203ENST00000525725 ZNF652Q9Y2D9 606 aa28.05■■■□□ 2.08
PACSIN3-203ENST00000525725 NEFMP07197 916 aa28.04■■■□□ 2.08
PACSIN3-203ENST00000525725 RALBP1Q15311 655 aa28.04■■■□□ 2.08
PACSIN3-203ENST00000525725 CCDC24Q8N4L8 307 aa28.03■■■□□ 2.08
PACSIN3-203ENST00000525725 MIS18AQ9NYP9 233 aa28.03■■■□□ 2.08
PACSIN3-203ENST00000525725 ANKRD36CQ5JPF3 1778 aa28.02■■■□□ 2.08
PACSIN3-203ENST00000525725 LTBP3Q9NS15 1303 aa28.02■■■□□ 2.08
PACSIN3-203ENST00000525725 SRGNP10124 158 aa28.02■■■□□ 2.08
PACSIN3-203ENST00000525725 ST5P78524 1137 aa28.02■■■□□ 2.08
PACSIN3-203ENST00000525725 RBM46Q8TBY0 533 aaKnown RBP28.02■■■□□ 2.08
PACSIN3-203ENST00000525725 THUMPD2Q9BTF0 503 aaKnown RBP28.02■■■□□ 2.08
PACSIN3-203ENST00000525725 MAPK8IP3Q9UPT6 1336 aa28.01■■■□□ 2.07
PACSIN3-203ENST00000525725 EIF4A1P60842 406 aaKnown RBP28.01■■■□□ 2.07
PACSIN3-203ENST00000525725 STYK1Q6J9G0 422 aa28.01■■■□□ 2.07
PACSIN3-203ENST00000525725 RIC1Q4ADV7 1423 aa28.01■■■□□ 2.07
PACSIN3-203ENST00000525725 PNNQ9H307 717 aaKnown RBP28■■■□□ 2.07
PACSIN3-203ENST00000525725 KLRG2A4D1S0 409 aaPredicted RBP27.99■■■□□ 2.07
PACSIN3-203ENST00000525725 IBTKQ9P2D0 1353 aaPredicted RBP27.99■■■□□ 2.07
PACSIN3-203ENST00000525725 NBPF5PQ86XG9 351 aaPredicted RBP27.98■■■□□ 2.07
PACSIN3-203ENST00000525725 ZNF622Q969S3 477 aaKnown RBP eCLIP27.98■■■□□ 2.07
PACSIN3-203ENST00000525725 MYBBP1AQ9BQG0 1328 aaKnown RBP27.97■■■□□ 2.07
PACSIN3-203ENST00000525725 PRPF40BQ6NWY9 871 aaKnown RBP27.97■■■□□ 2.07
PACSIN3-203ENST00000525725 CNKSR1Q969H4 720 aa27.97■■■□□ 2.07
PACSIN3-203ENST00000525725 SNED1Q8TER0 1413 aa27.96■■■□□ 2.07
PACSIN3-203ENST00000525725 APLP1P51693 650 aa27.96■■■□□ 2.07
PACSIN3-203ENST00000525725 MASTLQ96GX5 879 aa27.96■■■□□ 2.07
PACSIN3-203ENST00000525725 NIP7Q9Y221 180 aaKnown RBP eCLIP27.96■■■□□ 2.07
PACSIN3-203ENST00000525725 ERBB4Q15303 1308 aa27.95■■■□□ 2.07
PACSIN3-203ENST00000525725 PCNTO95613 3336 aa27.95■■■□□ 2.06
PACSIN3-203ENST00000525725 GLTPD2A6NH11 291 aa27.95■■■□□ 2.06
PACSIN3-203ENST00000525725 C21orf2O43822 256 aa27.95■■■□□ 2.06
PACSIN3-203ENST00000525725 HLFQ16534 295 aa27.95■■■□□ 2.06
PACSIN3-203ENST00000525725 ABCC12Q96J65 1359 aa27.95■■■□□ 2.06
PACSIN3-203ENST00000525725 MAP3K15Q6ZN16 1313 aa27.93■■■□□ 2.06
PACSIN3-203ENST00000525725 ERVV-1B6SEH8 477 aa27.93■■■□□ 2.06
PACSIN3-203ENST00000525725 FSTL1Q12841 308 aa27.93■■■□□ 2.06
PACSIN3-203ENST00000525725 C7orf43Q8WVR3 580 aa27.93■■■□□ 2.06
PACSIN3-203ENST00000525725 NPHP1O15259 732 aa27.92■■■□□ 2.06
PACSIN3-203ENST00000525725 TAOK3Q9H2K8 898 aa27.92■■■□□ 2.06
PACSIN3-203ENST00000525725 SOGA3Q5TF21 947 aa27.91■■■□□ 2.06
PACSIN3-203ENST00000525725 LRP10Q7Z4F1 713 aa27.91■■■□□ 2.06
PACSIN3-203ENST00000525725 RRAGCQ9HB90 399 aa27.91■■■□□ 2.06
PACSIN3-203ENST00000525725 BABAM1Q9NWV8 329 aa27.91■■■□□ 2.06
PACSIN3-203ENST00000525725 LAMB2P55268 1798 aa27.91■■■□□ 2.06
PACSIN3-203ENST00000525725 SCN4AP35499 1836 aa27.9■■■□□ 2.06
PACSIN3-203ENST00000525725 NPR1P16066 1061 aa27.9■■■□□ 2.06
PACSIN3-203ENST00000525725 TPTE2Q6XPS3 522 aa27.9■■■□□ 2.06
PACSIN3-203ENST00000525725 TMPOP42166 694 aaKnown RBP27.89■■■□□ 2.06
PACSIN3-203ENST00000525725 CRY2Q49AN0 593 aa27.89■■■□□ 2.06
PACSIN3-203ENST00000525725 C16orf71Q8IYS4 520 aaPredicted RBP27.89■■■□□ 2.06
PACSIN3-203ENST00000525725 UBN2Q6ZU65 1347 aa27.89■■■□□ 2.05
PACSIN3-203ENST00000525725 DDX10Q13206 875 aaKnown RBP27.88■■■□□ 2.05
PACSIN3-203ENST00000525725 TTLL7Q6ZT98 887 aa27.88■■■□□ 2.05
PACSIN3-203ENST00000525725 TSPYL4Q9UJ04 414 aa27.88■■■□□ 2.05
PACSIN3-203ENST00000525725 RIPK4P57078 832 aa27.87■■■□□ 2.05
PACSIN3-203ENST00000525725 DNAJC5GQ8N7S2 189 aa27.87■■■□□ 2.05
PACSIN3-203ENST00000525725 ZNF219Q9P2Y4 722 aaPredicted RBP27.87■■■□□ 2.05
PACSIN3-203ENST00000525725 LMOD3Q0VAK6 560 aa27.86■■■□□ 2.05
PACSIN3-203ENST00000525725 POTECB2RU33 542 aa27.85■■■□□ 2.05
PACSIN3-203ENST00000525725 VEGFAP15692 232 aaPredicted RBP27.85■■■□□ 2.05
PACSIN3-203ENST00000525725 PDIA6Q15084 440 aa27.85■■■□□ 2.05
PACSIN3-203ENST00000525725 ERFEQ4G0M1 354 aa27.85■■■□□ 2.05
PACSIN3-203ENST00000525725 KIF6Q6ZMV9 814 aa27.85■■■□□ 2.05
PACSIN3-203ENST00000525725 CCDC93Q567U6 631 aa27.84■■■□□ 2.05
PACSIN3-203ENST00000525725 SMC1BQ8NDV3 1235 aa27.84■■■□□ 2.05
PACSIN3-203ENST00000525725 NYXQ9GZU5 481 aa27.84■■■□□ 2.05
PACSIN3-203ENST00000525725 ADAMTSL1Q8N6G6 1762 aa27.83■■■□□ 2.05
PACSIN3-203ENST00000525725 RRP7AQ9Y3A4 280 aaKnown RBP27.83■■■□□ 2.05
PACSIN3-203ENST00000525725 MYL6BP14649 208 aa27.82■■■□□ 2.04
PACSIN3-203ENST00000525725 ZNF34Q8IZ26 560 aa27.82■■■□□ 2.04
PACSIN3-203ENST00000525725 ZBTB3Q9H5J0 574 aa27.82■■■□□ 2.04
PACSIN3-203ENST00000525725 GIGYF2Q6Y7W6 1299 aaKnown RBP27.81■■■□□ 2.04
PACSIN3-203ENST00000525725 NGEFQ8N5V2 710 aa27.81■■■□□ 2.04
PACSIN3-203ENST00000525725 FAM177BA6PVY3 158 aa27.8■■■□□ 2.04
PACSIN3-203ENST00000525725 NTSR2O95665 410 aa27.8■■■□□ 2.04
PACSIN3-203ENST00000525725 COL4A5P29400 1685 aa27.8■■■□□ 2.04
PACSIN3-203ENST00000525725 FKBP4Q02790 459 aaKnown RBP eCLIP27.79■■■□□ 2.048e-10■□□□□ 10.2
PACSIN3-203ENST00000525725 PROSER3Q2NL68 480 aa27.79■■■□□ 2.04
PACSIN3-203ENST00000525725 NUTM1Q86Y26 1132 aa27.79■■■□□ 2.04
PACSIN3-203ENST00000525725 TRIM35Q9UPQ4 493 aa27.79■■■□□ 2.04
PACSIN3-203ENST00000525725 DDX60Q8IY21 1712 aaKnown RBP27.78■■■□□ 2.04
PACSIN3-203ENST00000525725 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
PACSIN3-203ENST00000525725 CHL1O00533 1208 aa27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 GPTP24298 496 aa27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 HOXA10P31260 410 aaPredicted RBP27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 DPY19L2Q6NUT2 758 aa27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 OLFM4Q6UX06 510 aa27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 RUNDC1Q96C34 613 aa27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 PRKRIP1Q9H875 184 aaPredicted RBP27.77■■■□□ 2.04
PACSIN3-203ENST00000525725 SUSD4Q5VX71 490 aa27.76■■■□□ 2.03
PACSIN3-203ENST00000525725 L3MBTL3Q96JM7 780 aaPredicted RBP27.76■■■□□ 2.03
PACSIN3-203ENST00000525725 LRRC37AA6NMS7 1700 aa27.75■■■□□ 2.03
PACSIN3-203ENST00000525725 ALDH1B1P30837 517 aa27.75■■■□□ 2.03
PACSIN3-203ENST00000525725 RTKN2Q8IZC4 609 aa27.75■■■□□ 2.03
PACSIN3-203ENST00000525725 GTF2E1P29083 439 aaPredicted RBP27.74■■■□□ 2.03
PACSIN3-203ENST00000525725 HTRA3P83110 453 aa27.74■■■□□ 2.03
PACSIN3-203ENST00000525725 PARP10Q53GL7 1025 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms