RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MAP3K15Q6ZN16 1313 aa15.91■□□□□ 0.14
CCS-202ENST00000525435 MMP10P09238 476 aa15.9■□□□□ 0.14
CCS-202ENST00000525435 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
CCS-202ENST00000525435 XAGE3Q8WTP9 111 aa15.9■□□□□ 0.14
CCS-202ENST00000525435 ANXA1P04083 346 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 NFIXQ14938 502 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 TTLL7Q6ZT98 887 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 ANKRD13DQ6ZTN6 518 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 SETDB2Q96T68 719 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 PARP3Q9Y6F1 533 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
CCS-202ENST00000525435 LAMB4A4D0S4 1761 aa15.88■□□□□ 0.13
CCS-202ENST00000525435 DDX58O95786 925 aaKnown RBP15.88■□□□□ 0.13
CCS-202ENST00000525435 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
CCS-202ENST00000525435 HSP90AB3PQ58FF7 597 aa15.88■□□□□ 0.13
CCS-202ENST00000525435 GIGYF2Q6Y7W6 1299 aaKnown RBP15.88■□□□□ 0.13
CCS-202ENST00000525435 PLBD2Q8NHP8 589 aa15.88■□□□□ 0.13
CCS-202ENST00000525435 PPP1R1BQ9UD71 204 aaPredicted RBP15.88■□□□□ 0.13
CCS-202ENST00000525435 CD2APQ9Y5K6 639 aa15.87■□□□□ 0.13
CCS-202ENST00000525435 POLRMTO00411 1230 aaKnown RBP15.86■□□□□ 0.13
CCS-202ENST00000525435 AIMP1Q12904 312 aaKnown RBP15.86■□□□□ 0.13
CCS-202ENST00000525435 HLFQ16534 295 aa15.86■□□□□ 0.13
CCS-202ENST00000525435 ALDH1L2Q3SY69 923 aa15.86■□□□□ 0.13
CCS-202ENST00000525435 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
CCS-202ENST00000525435 DDR1Q08345 913 aa15.85■□□□□ 0.13
CCS-202ENST00000525435 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
CCS-202ENST00000525435 ZNF34Q8IZ26 560 aa15.85■□□□□ 0.13
CCS-202ENST00000525435 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
CCS-202ENST00000525435 COL24A1Q17RW2 1714 aa15.85■□□□□ 0.13
CCS-202ENST00000525435 SERPINB2P05120 415 aa15.84■□□□□ 0.13
CCS-202ENST00000525435 TRIM28Q13263 835 aaKnown RBP15.84■□□□□ 0.13
CCS-202ENST00000525435 PARP10Q53GL7 1025 aa15.84■□□□□ 0.13
CCS-202ENST00000525435 KSR2Q6VAB6 950 aa15.84■□□□□ 0.13
CCS-202ENST00000525435 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
CCS-202ENST00000525435 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
CCS-202ENST00000525435 NIP7Q9Y221 180 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCS-202ENST00000525435 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
CCS-202ENST00000525435 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.12
CCS-202ENST00000525435 CARMIL3Q8ND23 1372 aa15.83■□□□□ 0.12
CCS-202ENST00000525435 ATP10DQ9P241 1426 aa15.83■□□□□ 0.12
CCS-202ENST00000525435 C4AP0C0L4 1744 aa15.82■□□□□ 0.12
CCS-202ENST00000525435 FLIIQ13045 1269 aa15.82■□□□□ 0.12
CCS-202ENST00000525435 BICDL1Q6ZP65 573 aa15.82■□□□□ 0.12
CCS-202ENST00000525435 SYT17Q9BSW7 474 aa15.82■□□□□ 0.12
CCS-202ENST00000525435 NYXQ9GZU5 481 aa15.82■□□□□ 0.12
CCS-202ENST00000525435 TCERG1O14776 1098 aaKnown RBP15.81■□□□□ 0.12
CCS-202ENST00000525435 TGFB2P61812 414 aa15.81■□□□□ 0.12
CCS-202ENST00000525435 PPP1R42Q7Z4L9 355 aa15.81■□□□□ 0.12
CCS-202ENST00000525435 NBPF5PQ86XG9 351 aaPredicted RBP15.81■□□□□ 0.12
CCS-202ENST00000525435 SSH1Q8WYL5 1049 aa15.81■□□□□ 0.12
CCS-202ENST00000525435 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
CCS-202ENST00000525435 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
CCS-202ENST00000525435 PI4KAP2A4QPH2 592 aa15.8■□□□□ 0.12
CCS-202ENST00000525435 G2E3Q7L622 706 aa15.8■□□□□ 0.12
CCS-202ENST00000525435 MRPL50Q8N5N7 158 aaKnown RBP15.8■□□□□ 0.12
CCS-202ENST00000525435 PI4KAP1Q8N8J0 262 aa15.8■□□□□ 0.12
CCS-202ENST00000525435 ISCA1Q9BUE6 129 aa15.8■□□□□ 0.12
CCS-202ENST00000525435 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
CCS-202ENST00000525435 IBTKQ9P2D0 1353 aaPredicted RBP15.79■□□□□ 0.12
CCS-202ENST00000525435 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
CCS-202ENST00000525435 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
CCS-202ENST00000525435 FKBP5Q13451 457 aaPredicted RBP15.79■□□□□ 0.12
CCS-202ENST00000525435 CNBD1Q8NA66 436 aa15.79■□□□□ 0.12
CCS-202ENST00000525435 BRIP1Q9BX63 1249 aa15.79■□□□□ 0.12
CCS-202ENST00000525435 MAP3K2Q9Y2U5 619 aa15.79■□□□□ 0.12
CCS-202ENST00000525435 PTPRCP08575 1304 aa15.78■□□□□ 0.12
CCS-202ENST00000525435 ST5P78524 1137 aa15.78■□□□□ 0.12
CCS-202ENST00000525435 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
CCS-202ENST00000525435 PRR5LQ6MZQ0 368 aa15.78■□□□□ 0.12
CCS-202ENST00000525435 NLRP10Q86W26 655 aa15.78■□□□□ 0.12
CCS-202ENST00000525435 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
CCS-202ENST00000525435 UTP14AQ9BVJ6 771 aaKnown RBP15.78■□□□□ 0.12
CCS-202ENST00000525435 SCN7AQ01118 1682 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 NPHP1O15259 732 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 GPTP24298 496 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
CCS-202ENST00000525435 PDE6BP35913 854 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 SLC10A5Q5PT55 438 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.12
CCS-202ENST00000525435 CACNA1FO60840 1977 aa15.76■□□□□ 0.11
CCS-202ENST00000525435 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
CCS-202ENST00000525435 ARHGAP45Q92619 1136 aa15.76■□□□□ 0.11
CCS-202ENST00000525435 C10orf71Q711Q0 1435 aa15.76■□□□□ 0.11
CCS-202ENST00000525435 ADCY9O60503 1353 aa15.75■□□□□ 0.11
CCS-202ENST00000525435 KLRG2A4D1S0 409 aaPredicted RBP15.75■□□□□ 0.11
CCS-202ENST00000525435 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
CCS-202ENST00000525435 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
CCS-202ENST00000525435 MYD88Q99836 296 aa15.75■□□□□ 0.11
CCS-202ENST00000525435 TRMT112Q9UI30 125 aaKnown RBP15.75■□□□□ 0.11
CCS-202ENST00000525435 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
CCS-202ENST00000525435 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
CCS-202ENST00000525435 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
CCS-202ENST00000525435 NTSR2O95665 410 aa15.74■□□□□ 0.11
CCS-202ENST00000525435 KLHL34Q8N239 644 aa15.74■□□□□ 0.11
CCS-202ENST00000525435 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
CCS-202ENST00000525435 SH3TC1Q8TE82 1336 aa15.73■□□□□ 0.11
CCS-202ENST00000525435 KIF16BQ96L93 1317 aa15.73■□□□□ 0.11
CCS-202ENST00000525435 H0YIN7 160 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms