RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 ARHGAP23Q9P227 1491 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 CHD2O14647 1828 aaKnown RBP8.53□□□□□ -1.04
ATM-206ENST00000525056 FOXC1Q12948 553 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 L1TD1Q5T7N2 865 aaKnown RBP8.53□□□□□ -1.04
ATM-206ENST00000525056 NPM2Q86SE8 214 aaKnown RBP8.53□□□□□ -1.04
ATM-206ENST00000525056 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 MTMR14Q8NCE2 650 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 TRIM34Q9BYJ4 488 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 PKD2L1Q9P0L9 805 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 ISY1Q9ULR0 285 aaKnown RBP8.53□□□□□ -1.04
ATM-206ENST00000525056 CLTCL1P53675 1640 aa8.53□□□□□ -1.04
ATM-206ENST00000525056 TMEM2Q9UHN6 1383 aa8.52□□□□□ -1.05
ATM-206ENST00000525056 GDF9O60383 454 aa8.52□□□□□ -1.05
ATM-206ENST00000525056 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
ATM-206ENST00000525056 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.05
ATM-206ENST00000525056 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
ATM-206ENST00000525056 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
ATM-206ENST00000525056 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.05
ATM-206ENST00000525056 KIF1BO60333 1816 aa8.52□□□□□ -1.05
ATM-206ENST00000525056 PLEKHH1Q9ULM0 1364 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 WNT7AO00755 349 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 SOCS7O14512 581 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 PTMSP20962 102 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 NFKBIBQ15653 356 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 CCDC27Q2M243 656 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 NBPF1Q3BBV0 1214 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 CC2D1BQ5T0F9 858 aaKnown RBP8.51□□□□□ -1.05
ATM-206ENST00000525056 TMEM131LA2VDJ0 1609 aa8.51□□□□□ -1.05
ATM-206ENST00000525056 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 NOS1P29475 1434 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 C8orf34Q49A92 452 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 NBPF14Q5TI25 921 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
ATM-206ENST00000525056 WDR63Q8IWG1 891 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 FAM43AQ8N2R8 423 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
ATM-206ENST00000525056 CENPJQ9HC77 1338 aaPredicted RBP8.5□□□□□ -1.05
ATM-206ENST00000525056 APBB1O00213 710 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 PRR20EP86478 221 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 PRR20CP86479 221 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 PRR20DP86480 221 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 PRR20BP86481 221 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 PRR20AP86496 221 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 RGL3Q3MIN7 710 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 PNMA1Q8ND90 353 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 GPKOWQ92917 476 aaPredicted RBP eCLIP8.49□□□□□ -1.05
ATM-206ENST00000525056 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
ATM-206ENST00000525056 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
ATM-206ENST00000525056 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
ATM-206ENST00000525056 TNFRSF10AO00220 468 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 GFRA3O60609 400 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 EHBP1Q8NDI1 1231 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 CLUAP1Q96AJ1 413 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 CFAP53Q96M91 514 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 IRX2Q9BZI1 471 aaPredicted RBP8.48□□□□□ -1.05
ATM-206ENST00000525056 SLC52A1Q9NWF4 448 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 RPGRIP1LQ68CZ1 1315 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 TMEM94Q12767 1356 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
ATM-206ENST00000525056 RIMS2Q9UQ26 1411 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 ROBO1Q9Y6N7 1651 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 KCNA6P17658 529 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 MCM6Q14566 821 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 AGERQ15109 404 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 SH3BP5LQ7L8J4 393 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
ATM-206ENST00000525056 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 LAS1LQ9Y4W2 734 aaKnown RBP8.47□□□□□ -1.05
ATM-206ENST00000525056 NWD1Q149M9 1564 aa8.47□□□□□ -1.05
ATM-206ENST00000525056 VARSP26640 1264 aaKnown RBP8.46□□□□□ -1.06
ATM-206ENST00000525056 CANXP27824 592 aaKnown RBP8.46□□□□□ -1.06
ATM-206ENST00000525056 FLIIQ13045 1269 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 RUNDC1Q96C34 613 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 PNNQ9H307 717 aaKnown RBP8.46□□□□□ -1.06
ATM-206ENST00000525056 RWDD1Q9H446 243 aaPredicted RBP8.46□□□□□ -1.06
ATM-206ENST00000525056 NDUFB9Q9Y6M9 179 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 ADGRB2O60241 1585 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 KIF16BQ96L93 1317 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 SHPRHQ149N8 1683 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 PHLPP1O60346 1717 aa8.46□□□□□ -1.06
ATM-206ENST00000525056 SIAH2O43255 324 aa8.45□□□□□ -1.06
ATM-206ENST00000525056 PLIN1O60240 522 aa8.45□□□□□ -1.06
ATM-206ENST00000525056 CNGB1Q14028 1251 aaPredicted RBP8.45□□□□□ -1.06
ATM-206ENST00000525056 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
ATM-206ENST00000525056 CYP4X1Q8N118 509 aa8.45□□□□□ -1.06
ATM-206ENST00000525056 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
ATM-206ENST00000525056 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.44□□□□□ -1.06
ATM-206ENST00000525056 NRG2O14511 850 aaPredicted RBP8.44□□□□□ -1.06
ATM-206ENST00000525056 PTK2Q05397 1052 aa8.44□□□□□ -1.06
ATM-206ENST00000525056 LAPTM4AQ15012 233 aa8.44□□□□□ -1.06
ATM-206ENST00000525056 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
ATM-206ENST00000525056 SNIP1Q8TAD8 396 aaKnown RBP8.44□□□□□ -1.06
ATM-206ENST00000525056 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
ATM-206ENST00000525056 TOR4AQ9NXH8 423 aa8.44□□□□□ -1.06
ATM-206ENST00000525056 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
ATM-206ENST00000525056 IL16Q14005 1332 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms