RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TBCELQ5QJ74 424 aa6.2□□□□□ -1.42
CSDE1-208ENST00000524652 C1orf53Q5VUE5 145 aa6.2□□□□□ -1.42
CSDE1-208ENST00000524652 C7orf43Q8WVR3 580 aa6.2□□□□□ -1.42
CSDE1-208ENST00000524652 BTBD6Q96KE9 485 aa6.2□□□□□ -1.42
CSDE1-208ENST00000524652 TSPAN10Q9H1Z9 355 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-208ENST00000524652 RBM19Q9Y4C8 960 aaKnown RBP6.2□□□□□ -1.42
CSDE1-208ENST00000524652 MAFBQ9Y5Q3 323 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-208ENST00000524652 A6NJR5 290 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 MSTNO14793 375 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 DKK1O94907 266 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 SUZ12Q15022 739 aaKnown RBP6.19□□□□□ -1.42
CSDE1-208ENST00000524652 LINC00114Q6XXX2 140 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 CHSY3Q70JA7 882 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 FCHSD1Q86WN1 690 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 RHPN1Q8TCX5 695 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 ZNF594Q96JF6 807 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-208ENST00000524652 NEUROD4Q9HD90 331 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 STRN4Q9NRL3 753 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 KLF15Q9UIH9 416 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 PRR12Q9ULL5 1215 aa6.19□□□□□ -1.42
CSDE1-208ENST00000524652 ITGB2P05107 769 aa6.18□□□□□ -1.42
CSDE1-208ENST00000524652 COL8A1P27658 744 aa6.18□□□□□ -1.42
CSDE1-208ENST00000524652 SH3PXD2AQ5TCZ1 1133 aa6.18□□□□□ -1.42
CSDE1-208ENST00000524652 LRRC69Q6ZNQ3 347 aa6.18□□□□□ -1.42
CSDE1-208ENST00000524652 STAG2Q8N3U4 1231 aa6.18□□□□□ -1.42
CSDE1-208ENST00000524652 TSEN2Q8NCE0 465 aaKnown RBP6.18□□□□□ -1.42
CSDE1-208ENST00000524652 SPOCK3Q9BQ16 436 aa6.18□□□□□ -1.42
CSDE1-208ENST00000524652 NOP53Q9NZM5 478 aaKnown RBP6.18□□□□□ -1.42
CSDE1-208ENST00000524652 TFIP11Q9UBB9 837 aaKnown RBP6.18□□□□□ -1.42
CSDE1-208ENST00000524652 PROCP04070 461 aa6.17□□□□□ -1.42
CSDE1-208ENST00000524652 RASA1P20936 1047 aa6.17□□□□□ -1.42
CSDE1-208ENST00000524652 SEC13P55735 322 aa6.17□□□□□ -1.42
CSDE1-208ENST00000524652 PCBP4P57723 403 aaKnown RBP6.17□□□□□ -1.42
CSDE1-208ENST00000524652 GAS2L2Q8NHY3 880 aa6.17□□□□□ -1.42
CSDE1-208ENST00000524652 CALR3Q96L12 384 aaKnown RBP6.17□□□□□ -1.42
CSDE1-208ENST00000524652 ANKIB1Q9P2G1 1089 aa6.17□□□□□ -1.42
CSDE1-208ENST00000524652 KRBA1A5PL33 1030 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 SFI1A8K8P3 1242 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 SIN3BO75182 1162 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 GRIN2CQ14957 1233 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 HIF1AQ16665 826 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 PPP1R12CQ9BZL4 782 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 PHACTR1Q9C0D0 580 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 CCDC180Q9P1Z9 1646 aa6.16□□□□□ -1.42
CSDE1-208ENST00000524652 ELOA3CA0A087WX78 387 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-208ENST00000524652 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 ELOA3DA6NLF2 546 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-208ENST00000524652 FAM196BA6NMK8 535 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 C21orf2O43822 256 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 PPP1R12BO60237 982 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-208ENST00000524652 ELOA3BQ3SY89 546 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 SYT9Q86SS6 491 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 ELOA3Q8NG57 546 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 MDFIQ99750 246 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 C2orf49Q9BVC5 232 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-208ENST00000524652 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 SUV39H2Q9H5I1 410 aa6.15□□□□□ -1.42
CSDE1-208ENST00000524652 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 ALAS2P22557 587 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 KCNQ4P56696 695 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 PTK7Q13308 1070 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 NEUROD1Q13562 356 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 CRTC2Q53ET0 693 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-208ENST00000524652 LARP1Q6PKG0 1096 aaKnown RBP6.14□□□□□ -1.43
CSDE1-208ENST00000524652 TNFRSF25Q93038 417 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 BRD7Q9NPI1 651 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 HCN4Q9Y3Q4 1203 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 ATAD2Q6PL18 1390 aa6.14□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L15C9J2P7 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L10C9JJH3 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L13C9JLJ4 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L12C9JPN9 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L11C9JVI0 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L21D6R901 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L18D6R9N7 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L22D6RA61 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L17D6RBQ6 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L19D6RCP7 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L20D6RJB6 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 TYRO3Q06418 890 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 SPEM2Q0P670 501 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 USP17L24Q0WX57 530 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 SFSWAPQ12872 951 aaKnown RBP6.13□□□□□ -1.43
CSDE1-208ENST00000524652 KANK4Q5T7N3 995 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-208ENST00000524652 ALDH16A1Q8IZ83 802 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 SCG3Q8WXD2 468 aaKnown RBP6.13□□□□□ -1.43
CSDE1-208ENST00000524652 HSH2DQ96JZ2 352 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 SUSD3Q96L08 255 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 CEP63Q96MT8 703 aa6.13□□□□□ -1.43
CSDE1-208ENST00000524652 DPYDQ12882 1025 aa6.12□□□□□ -1.43
CSDE1-208ENST00000524652 SLC30A3Q99726 388 aa6.12□□□□□ -1.43
CSDE1-208ENST00000524652 ADAM23O75077 832 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 IGFBP4P22692 258 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 IER5Q5VY09 327 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 ANKMY2Q8IV38 441 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 ZNF280CQ8ND82 737 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 VRTNQ9H8Y1 702 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 EFCC1Q9HA90 598 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 KCNH4Q9UQ05 1017 aa6.11□□□□□ -1.43
CSDE1-208ENST00000524652 LMOD1P29536 600 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms