RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 DBF4Q9UBU7 674 aaPredicted RBP10.78□□□□□ -0.68
PKP3-202ENST00000524646 SNX14Q9Y5W7 946 aa10.78□□□□□ -0.68
PKP3-202ENST00000524646 KCNQ3O43525 872 aa10.77□□□□□ -0.69
PKP3-202ENST00000524646 PHF14O94880 888 aa10.77□□□□□ -0.69
PKP3-202ENST00000524646 OS9Q13438 667 aaPredicted RBP10.77□□□□□ -0.69
PKP3-202ENST00000524646 FOXD4L5Q5VV16 416 aaPredicted RBP10.77□□□□□ -0.69
PKP3-202ENST00000524646 ANKLE2Q86XL3 938 aa10.77□□□□□ -0.69
PKP3-202ENST00000524646 RUFY2Q8WXA3 655 aa10.77□□□□□ -0.69
PKP3-202ENST00000524646 FOXD4L4Q8WXT5 416 aaPredicted RBP10.77□□□□□ -0.69
PKP3-202ENST00000524646 CHAMP1Q96JM3 812 aa10.77□□□□□ -0.69
PKP3-202ENST00000524646 DIAPH3Q9NSV4 1193 aa10.77□□□□□ -0.69
PKP3-202ENST00000524646 KDM6AO15550 1401 aaPredicted RBP10.76□□□□□ -0.69
PKP3-202ENST00000524646 SYCE3A1L190 88 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 MAP4K4O95819 1239 aaPredicted RBP10.76□□□□□ -0.69
PKP3-202ENST00000524646 TPM2P07951 284 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 MSNP26038 577 aaKnown RBP10.76□□□□□ -0.69
PKP3-202ENST00000524646 KSR2Q6VAB6 950 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.76□□□□□ -0.69
PKP3-202ENST00000524646 KIAA1211Q6ZU35 1233 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 ARHGEF25Q86VW2 580 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 LRRC59Q96AG4 307 aaKnown RBP10.76□□□□□ -0.69
PKP3-202ENST00000524646 TSPY26PQ9H489 355 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 ECHDC1Q9NTX5 307 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 NSFL1CQ9UNZ2 370 aaKnown RBP10.76□□□□□ -0.69
PKP3-202ENST00000524646 SPEF2Q9C093 1822 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 UTYO14607 1347 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 JCADQ9P266 1359 aa10.76□□□□□ -0.69
PKP3-202ENST00000524646 ZBTB7CA1YPR0 619 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 ANXA1P04083 346 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 PSME1Q06323 249 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 MPRIPQ6WCQ1 1025 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 CLASRPQ8N2M8 674 aaKnown RBP10.75□□□□□ -0.69
PKP3-202ENST00000524646 ANKRD24Q8TF21 1146 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 KCNB2Q92953 911 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 HYPKQ9NX55 129 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 MAP3K2Q9Y2U5 619 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 RFX7Q2KHR2 1363 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 STRCP1A6NGW2 1772 aa10.75□□□□□ -0.69
PKP3-202ENST00000524646 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
PKP3-202ENST00000524646 ZSCAN22P10073 491 aaPredicted RBP10.74□□□□□ -0.69
PKP3-202ENST00000524646 AK2P54819 239 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 PROSER3Q2NL68 480 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 ESCO1Q5FWF5 840 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 LINS1Q8NG48 757 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 TM6SF1Q9BZW5 370 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 CCDC39Q9UFE4 941 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.74□□□□□ -0.69
PKP3-202ENST00000524646 ABCA3Q99758 1704 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 CCDC171Q6TFL3 1326 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 MED23Q9ULK4 1368 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 MYH7P12883 1935 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 MEGF6O75095 1541 aa10.74□□□□□ -0.69
PKP3-202ENST00000524646 SHANK3Q9BYB0 1731 aa10.73□□□□□ -0.69
PKP3-202ENST00000524646 HIP1O00291 1037 aa10.73□□□□□ -0.69
PKP3-202ENST00000524646 DDX58O95786 925 aaKnown RBP10.73□□□□□ -0.69
PKP3-202ENST00000524646 IFIT2P09913 472 aaKnown RBP10.73□□□□□ -0.69
PKP3-202ENST00000524646 MCM5P33992 734 aa10.73□□□□□ -0.69
PKP3-202ENST00000524646 CWC27Q6UX04 472 aaKnown RBP10.73□□□□□ -0.69
PKP3-202ENST00000524646 RUFY3Q7L099 469 aa10.73□□□□□ -0.69
PKP3-202ENST00000524646 RASEFQ8IZ41 740 aa10.73□□□□□ -0.69
PKP3-202ENST00000524646 EVI5LQ96CN4 794 aa10.73□□□□□ -0.69
PKP3-202ENST00000524646 SH2B1Q9NRF2 756 aaPredicted RBP10.73□□□□□ -0.69
PKP3-202ENST00000524646 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
PKP3-202ENST00000524646 DDX60Q8IY21 1712 aaKnown RBP10.72□□□□□ -0.69
PKP3-202ENST00000524646 GRM8O00222 908 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 ZNF500O60304 480 aaPredicted RBP10.72□□□□□ -0.69
PKP3-202ENST00000524646 OFD1O75665 1012 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 F13A1P00488 732 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 GCP02774 474 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
PKP3-202ENST00000524646 CCDC183Q5T5S1 534 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 VPS53Q5VIR6 699 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 AACSQ86V21 672 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 KLHL34Q8N239 644 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 SUCLG2Q96I99 432 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 ZSCAN31Q96LW9 406 aaPredicted RBP10.72□□□□□ -0.69
PKP3-202ENST00000524646 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
PKP3-202ENST00000524646 SNRKQ9NRH2 765 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 NOL7Q9UMY1 257 aaKnown RBP10.72□□□□□ -0.69
PKP3-202ENST00000524646 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 ZKSCAN5Q9Y2L8 839 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 ATP6V1DQ9Y5K8 247 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 COL15A1P39059 1388 aa10.72□□□□□ -0.69
PKP3-202ENST00000524646 STX6O43752 255 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 GADD45BO75293 160 aaPredicted RBP10.71□□□□□ -0.69
PKP3-202ENST00000524646 LARGE1O95461 756 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 ERBB3P21860 1342 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 DCCP43146 1447 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 USP48Q86UV5 1035 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 FAM184AQ8NB25 1140 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
PKP3-202ENST00000524646 PA2G4Q9UQ80 394 aaKnown RBP10.71□□□□□ -0.69
PKP3-202ENST00000524646 SPG7Q9UQ90 795 aa10.71□□□□□ -0.69
PKP3-202ENST00000524646 TERF1P54274 439 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 UBE2HP62256 183 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 PTH1RQ03431 593 aa10.7□□□□□ -0.7
PKP3-202ENST00000524646 CWF19L2Q2TBE0 894 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms