RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 COPS6Q7L5N1 327 aa9.99□□□□□ -0.81
NPAS4-202ENST00000524617 MRPL50Q8N5N7 158 aaKnown RBP9.99□□□□□ -0.81
NPAS4-202ENST00000524617 XAGE3Q8WTP9 111 aa9.99□□□□□ -0.81
NPAS4-202ENST00000524617 SSH1Q8WYL5 1049 aa9.99□□□□□ -0.81
NPAS4-202ENST00000524617 YTHDC1Q96MU7 727 aaKnown RBP9.99□□□□□ -0.81
NPAS4-202ENST00000524617 SGIP1Q9BQI5 828 aa9.99□□□□□ -0.81
NPAS4-202ENST00000524617 MTFR1LQ9H019 292 aa9.99□□□□□ -0.81
NPAS4-202ENST00000524617 PHAXQ9H814 394 aaKnown RBP9.99□□□□□ -0.81
NPAS4-202ENST00000524617 SRP68Q9UHB9 627 aaKnown RBP9.99□□□□□ -0.81
NPAS4-202ENST00000524617 CACNA1FO60840 1977 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 ZPR1O75312 459 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 SLC4A2P04920 1241 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 FLIIQ13045 1269 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 GIGYF2Q6Y7W6 1299 aaKnown RBP9.98□□□□□ -0.81
NPAS4-202ENST00000524617 KIF6Q6ZMV9 814 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 NPM2Q86SE8 214 aaKnown RBP9.98□□□□□ -0.81
NPAS4-202ENST00000524617 PLBD2Q8NHP8 589 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 NRXN2Q9P2S2 1712 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 ADCY9O60503 1353 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 IBTKQ9P2D0 1353 aaPredicted RBP9.98□□□□□ -0.81
NPAS4-202ENST00000524617 ARFGEF2Q9Y6D5 1785 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 PXDNLA1KZ92 1463 aa9.98□□□□□ -0.81
NPAS4-202ENST00000524617 FKBP8Q14318 412 aa9.97□□□□□ -0.81
NPAS4-202ENST00000524617 G2E3Q7L622 706 aa9.97□□□□□ -0.81
NPAS4-202ENST00000524617 NLGN1Q8N2Q7 840 aa9.97□□□□□ -0.81
NPAS4-202ENST00000524617 TBC1D2BQ9UPU7 963 aa9.97□□□□□ -0.81
NPAS4-202ENST00000524617 ZNF652Q9Y2D9 606 aa9.97□□□□□ -0.81
NPAS4-202ENST00000524617 ZNF330Q9Y3S2 320 aaPredicted RBP9.97□□□□□ -0.81
NPAS4-202ENST00000524617 PTPRCP08575 1304 aa9.97□□□□□ -0.81
NPAS4-202ENST00000524617 ANKRD36CQ5JPF3 1778 aa9.96□□□□□ -0.81
NPAS4-202ENST00000524617 TCERG1O14776 1098 aaKnown RBP9.96□□□□□ -0.82
NPAS4-202ENST00000524617 DDX58O95786 925 aaKnown RBP9.96□□□□□ -0.82
NPAS4-202ENST00000524617 TM4SF1P30408 202 aa9.96□□□□□ -0.82
NPAS4-202ENST00000524617 PTGER2P43116 358 aa9.96□□□□□ -0.82
NPAS4-202ENST00000524617 HLFQ16534 295 aa9.96□□□□□ -0.82
NPAS4-202ENST00000524617 ANKRD13DQ6ZTN6 518 aa9.96□□□□□ -0.82
NPAS4-202ENST00000524617 SMC4Q9NTJ3 1288 aa9.96□□□□□ -0.82
NPAS4-202ENST00000524617 KIF16BQ96L93 1317 aa9.96□□□□□ -0.82
NPAS4-202ENST00000524617 MSH5O43196 834 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 ZBTB7AO95365 584 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 DDR1Q08345 913 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
NPAS4-202ENST00000524617 TRIM28Q13263 835 aaKnown RBP9.95□□□□□ -0.82
NPAS4-202ENST00000524617 HSP90AB3PQ58FF7 597 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 TBC1D9BQ66K14 1250 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 KSR2Q6VAB6 950 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 ZNF34Q8IZ26 560 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 ARHGAP45Q92619 1136 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 ZBTB3Q9H5J0 574 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 CARMIL3Q8ND23 1372 aa9.95□□□□□ -0.82
NPAS4-202ENST00000524617 N4BP2Q86UW6 1770 aaPredicted RBP9.95□□□□□ -0.82
NPAS4-202ENST00000524617 NUP98P52948 1817 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 C10orf71Q711Q0 1435 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 UBN2Q6ZU65 1347 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 POLRMTO00411 1230 aaKnown RBP9.94□□□□□ -0.82
NPAS4-202ENST00000524617 FKBP5Q13451 457 aaPredicted RBP9.94□□□□□ -0.82
NPAS4-202ENST00000524617 TCIRG1Q13488 830 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 NFIXQ14938 502 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 MSL1Q68DK7 614 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 ISCA1Q9BUE6 129 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 METTL22Q9BUU2 404 aaPredicted RBP9.94□□□□□ -0.82
NPAS4-202ENST00000524617 BCL2L13Q9BXK5 485 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 SPON1Q9HCB6 807 aa9.94□□□□□ -0.82
NPAS4-202ENST00000524617 RNF123Q5XPI4 1314 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 BCAR3O75815 825 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 MMP10P09238 476 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 PARP10Q53GL7 1025 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 DNAAF4Q8WXU2 420 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 MAP3K2Q9Y2U5 619 aa9.93□□□□□ -0.82
NPAS4-202ENST00000524617 ABCC4O15439 1325 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 KIF13BQ9NQT8 1826 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 NTSR2O95665 410 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 IGKV5-2P06315 115 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 KCNA4P22459 653 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 POLD1P28340 1107 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 RIC3Q7Z5B4 369 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 NLRP10Q86W26 655 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
NPAS4-202ENST00000524617 NIP7Q9Y221 180 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPAS4-202ENST00000524617 BEND3Q5T5X7 828 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 ATF7IPQ6VMQ6 1270 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 CCDC191Q8NCU4 936 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 LINS1Q8NG48 757 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 SETDB2Q96T68 719 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 API5Q9BZZ5 524 aaKnown RBP9.91□□□□□ -0.82
NPAS4-202ENST00000524617 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 NOB1Q9ULX3 412 aaKnown RBP9.91□□□□□ -0.82
NPAS4-202ENST00000524617 ATF5Q9Y2D1 282 aaPredicted RBP9.91□□□□□ -0.82
NPAS4-202ENST00000524617 PARP3Q9Y6F1 533 aa9.91□□□□□ -0.82
NPAS4-202ENST00000524617 NEURL1BA8MQ27 555 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 F6X3S4 739 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 TULP1O00294 542 aaPredicted RBP9.9□□□□□ -0.82
NPAS4-202ENST00000524617 IPO8O15397 1037 aaKnown RBP9.9□□□□□ -0.82
NPAS4-202ENST00000524617 SERPINB2P05120 415 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 TRIM27P14373 513 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 NEXNQ0ZGT2 675 aa9.9□□□□□ -0.82
NPAS4-202ENST00000524617 SUSD4Q5VX71 490 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms