RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ZNF831Q5JPB2 1677 aa9.13□□□□□ -0.95
VPS11-201ENST00000524454 KCPQ6ZWJ8 1503 aa9.12□□□□□ -0.95
VPS11-201ENST00000524454 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
VPS11-201ENST00000524454 IER5LQ5T953 404 aa9.12□□□□□ -0.95
VPS11-201ENST00000524454 SLC52A2Q9HAB3 445 aa9.12□□□□□ -0.95
VPS11-201ENST00000524454 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
VPS11-201ENST00000524454 GNPATO15228 680 aa9.11□□□□□ -0.95
VPS11-201ENST00000524454 PDE3AQ14432 1141 aa9.11□□□□□ -0.95
VPS11-201ENST00000524454 NFE2L2Q16236 605 aa9.11□□□□□ -0.95
VPS11-201ENST00000524454 IL17REQ8NFR9 667 aa9.11□□□□□ -0.95
VPS11-201ENST00000524454 CICQ96RK0 1608 aaPredicted RBP9.1□□□□□ -0.95
VPS11-201ENST00000524454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
VPS11-201ENST00000524454 GNAT3A8MTJ3 354 aa9.1□□□□□ -0.95
VPS11-201ENST00000524454 C7P10643 843 aa9.1□□□□□ -0.95
VPS11-201ENST00000524454 DCTN1Q14203 1278 aa9.1□□□□□ -0.95
VPS11-201ENST00000524454 MCM10Q7L590 875 aa9.1□□□□□ -0.95
VPS11-201ENST00000524454 GAS2L2Q8NHY3 880 aa9.1□□□□□ -0.95
VPS11-201ENST00000524454 MFRPQ9BY79 579 aa9.1□□□□□ -0.95
VPS11-201ENST00000524454 FHDC1Q9C0D6 1143 aaPredicted RBP9.1□□□□□ -0.95
VPS11-201ENST00000524454 MS4A1P11836 297 aa9.09□□□□□ -0.95
VPS11-201ENST00000524454 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
VPS11-201ENST00000524454 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
VPS11-201ENST00000524454 PDCD7Q8N8D1 485 aaKnown RBP9.09□□□□□ -0.95
VPS11-201ENST00000524454 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
VPS11-201ENST00000524454 KCNQ3O43525 872 aa9.08□□□□□ -0.96
VPS11-201ENST00000524454 CRKLP46109 303 aaKnown RBP9.08□□□□□ -0.96
VPS11-201ENST00000524454 BRPF1P55201 1214 aaPredicted RBP9.08□□□□□ -0.96
VPS11-201ENST00000524454 TEFQ10587 303 aa9.08□□□□□ -0.96
VPS11-201ENST00000524454 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
VPS11-201ENST00000524454 ARXQ96QS3 562 aa9.08□□□□□ -0.96
VPS11-201ENST00000524454 IFT57Q9NWB7 429 aa9.08□□□□□ -0.96
VPS11-201ENST00000524454 HTATSF1O43719 755 aaKnown RBP9.07□□□□□ -0.96
VPS11-201ENST00000524454 POLD1P28340 1107 aa9.07□□□□□ -0.96
VPS11-201ENST00000524454 RIPK4P57078 832 aa9.07□□□□□ -0.96
VPS11-201ENST00000524454 SLC16A10Q8TF71 515 aa9.07□□□□□ -0.96
VPS11-201ENST00000524454 MS4A4AQ96JQ5 239 aa9.07□□□□□ -0.96
VPS11-201ENST00000524454 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
VPS11-201ENST00000524454 CEMIPQ8WUJ3 1361 aa9.07□□□□□ -0.96
VPS11-201ENST00000524454 KDM3BQ7LBC6 1761 aa9.07□□□□□ -0.96
VPS11-201ENST00000524454 CNTNAP4Q9C0A0 1308 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 FANCIQ9NVI1 1328 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 POTEB2H3BUK9 544 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 ZNF853P0CG23 659 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 SSFA2P28290 1259 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 RARSP54136 660 aaKnown RBP9.06□□□□□ -0.96
VPS11-201ENST00000524454 GNAI1P63096 354 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 ALDH1L2Q3SY69 923 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 INTS5Q6P9B9 1019 aaKnown RBP9.06□□□□□ -0.96
VPS11-201ENST00000524454 TTC5Q8N0Z6 440 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 NLGN2Q8NFZ4 835 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 RTF1Q92541 710 aaKnown RBP9.06□□□□□ -0.96
VPS11-201ENST00000524454 CCDC136Q96JN2 1154 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 SYT17Q9BSW7 474 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 MIS18AQ9NYP9 233 aa9.06□□□□□ -0.96
VPS11-201ENST00000524454 SRP68Q9UHB9 627 aaKnown RBP9.06□□□□□ -0.96
VPS11-201ENST00000524454 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
VPS11-201ENST00000524454 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
VPS11-201ENST00000524454 SOS1Q07889 1333 aaPredicted RBP9.05□□□□□ -0.96
VPS11-201ENST00000524454 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 PRAMEF22A3QJZ6 481 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 RPS6KA4O75676 772 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 CYP19A1P11511 503 aaPredicted RBP9.05□□□□□ -0.96
VPS11-201ENST00000524454 TRAPPC3LQ5T215 181 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 ZNF790Q6PG37 636 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 FLAD1Q8NFF5 587 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
VPS11-201ENST00000524454 ZNF496Q96IT1 587 aaPredicted RBP9.05□□□□□ -0.96
VPS11-201ENST00000524454 BABAM1Q9NWV8 329 aa9.05□□□□□ -0.96
VPS11-201ENST00000524454 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
VPS11-201ENST00000524454 CANXP27824 592 aaKnown RBP9.04□□□□□ -0.96
VPS11-201ENST00000524454 PIP4K2AP48426 406 aaPredicted RBP9.04□□□□□ -0.96
VPS11-201ENST00000524454 IRX6P78412 446 aaPredicted RBP9.04□□□□□ -0.96
VPS11-201ENST00000524454 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
VPS11-201ENST00000524454 CFAP44Q96MT7 982 aa9.04□□□□□ -0.96
VPS11-201ENST00000524454 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
VPS11-201ENST00000524454 CCDC87Q9NVE4 849 aa9.04□□□□□ -0.96
VPS11-201ENST00000524454 WWC3Q9ULE0 1092 aa9.04□□□□□ -0.96
VPS11-201ENST00000524454 ZBTB1Q9Y2K1 713 aa9.04□□□□□ -0.96
VPS11-201ENST00000524454 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
VPS11-201ENST00000524454 HEG1Q9ULI3 1381 aa9.03□□□□□ -0.96
VPS11-201ENST00000524454 RFC4P35249 363 aa9.03□□□□□ -0.96
VPS11-201ENST00000524454 NEUROD2Q15784 382 aa9.03□□□□□ -0.96
VPS11-201ENST00000524454 DPY19L2Q6NUT2 758 aa9.03□□□□□ -0.96
VPS11-201ENST00000524454 ZNF330Q9Y3S2 320 aaPredicted RBP9.03□□□□□ -0.96
VPS11-201ENST00000524454 KIAA1551Q9HCM1 1747 aa9.02□□□□□ -0.96
VPS11-201ENST00000524454 COL15A1P39059 1388 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 SCN7AQ01118 1682 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 SEC24BO95487 1268 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 A1BGP04217 495 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 MMP10P09238 476 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 POTEJP0CG39 1038 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 GYS1P13807 737 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 PLCG2P16885 1265 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 EXOC6Q8TAG9 804 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 BBXQ8WY36 941 aaPredicted RBP9.02□□□□□ -0.97
VPS11-201ENST00000524454 ARHGAP45Q92619 1136 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 FMNL2Q96PY5 1086 aa9.02□□□□□ -0.97
VPS11-201ENST00000524454 CHMP4BQ9H444 224 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms