RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 PSMA6P60900 246 aaKnown RBP10.37□□□□□ -0.75
SKP1-213ENST00000524288 CTBSQ01459 385 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 LAMC2Q13753 1193 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 GALNT6Q8NCL4 622 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 CHMP3Q9Y3E7 222 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 PARP3Q9Y6F1 533 aa10.37□□□□□ -0.75
SKP1-213ENST00000524288 TXLNAP40222 546 aa10.36□□□□□ -0.75
SKP1-213ENST00000524288 EDARADDQ8WWZ3 215 aa10.36□□□□□ -0.75
SKP1-213ENST00000524288 ZNF232Q9UNY5 417 aa10.36□□□□□ -0.75
SKP1-213ENST00000524288 POTEAQ6S8J7 498 aa10.35□□□□□ -0.75
SKP1-213ENST00000524288 VRTNQ9H8Y1 702 aa10.35□□□□□ -0.75
SKP1-213ENST00000524288 GGA1Q9UJY5 639 aa10.35□□□□□ -0.75
SKP1-213ENST00000524288 CNTNAP5Q8WYK1 1306 aa10.34□□□□□ -0.75
SKP1-213ENST00000524288 DCDC2BA2VCK2 349 aa10.34□□□□□ -0.75
SKP1-213ENST00000524288 SHISA8B8ZZ34 492 aa10.34□□□□□ -0.75
SKP1-213ENST00000524288 KHNYNO15037 678 aaKnown RBP10.34□□□□□ -0.75
SKP1-213ENST00000524288 ATG7O95352 703 aa10.34□□□□□ -0.75
SKP1-213ENST00000524288 C1orf53Q5VUE5 145 aa10.34□□□□□ -0.75
SKP1-213ENST00000524288 USTQ9Y2C2 406 aa10.34□□□□□ -0.75
SKP1-213ENST00000524288 EFSO43281 561 aa10.33□□□□□ -0.76
SKP1-213ENST00000524288 DKK1O94907 266 aa10.33□□□□□ -0.76
SKP1-213ENST00000524288 RASA1P20936 1047 aa10.33□□□□□ -0.76
SKP1-213ENST00000524288 KANK4Q5T7N3 995 aaPredicted RBP10.33□□□□□ -0.76
SKP1-213ENST00000524288 C1orf229Q6ZS94 237 aaPredicted RBP10.33□□□□□ -0.76
SKP1-213ENST00000524288 ZNF594Q96JF6 807 aaPredicted RBP10.33□□□□□ -0.76
SKP1-213ENST00000524288 TSPAN10Q9H1Z9 355 aaPredicted RBP10.33□□□□□ -0.76
SKP1-213ENST00000524288 MKL2Q9ULH7 1088 aa10.33□□□□□ -0.76
SKP1-213ENST00000524288 IGHA1P01876 353 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 EPXP11678 715 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 ADH6P28332 368 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 PDE4CQ08493 712 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 TBCELQ5QJ74 424 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 STAG2Q8N3U4 1231 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 GZF1Q9H116 711 aaPredicted RBP10.32□□□□□ -0.76
SKP1-213ENST00000524288 MARK1Q9P0L2 795 aa10.32□□□□□ -0.76
SKP1-213ENST00000524288 CCDC9Q9Y3X0 531 aaKnown RBP10.32□□□□□ -0.76
SKP1-213ENST00000524288 PIK3R2O00459 728 aa10.31□□□□□ -0.76
SKP1-213ENST00000524288 CD33P20138 364 aa10.31□□□□□ -0.76
SKP1-213ENST00000524288 SEC13P55735 322 aa10.31□□□□□ -0.76
SKP1-213ENST00000524288 ALYREFQ86V81 257 aaKnown RBP10.31□□□□□ -0.76
SKP1-213ENST00000524288 C7orf43Q8WVR3 580 aa10.31□□□□□ -0.76
SKP1-213ENST00000524288 NEUROD4Q9HD90 331 aa10.31□□□□□ -0.76
SKP1-213ENST00000524288 TMEM88BA6NKF7 163 aa10.3□□□□□ -0.76
SKP1-213ENST00000524288 ZNF468Q5VIY5 522 aaPredicted RBP10.3□□□□□ -0.76
SKP1-213ENST00000524288 LARP1Q6PKG0 1096 aaKnown RBP10.3□□□□□ -0.76
SKP1-213ENST00000524288 TSEN2Q8NCE0 465 aaKnown RBP10.3□□□□□ -0.76
SKP1-213ENST00000524288 RHPN1Q8TCX5 695 aa10.3□□□□□ -0.76
SKP1-213ENST00000524288 STK32AQ8WU08 396 aa10.3□□□□□ -0.76
SKP1-213ENST00000524288 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
SKP1-213ENST00000524288 ZMIZ1Q9ULJ6 1067 aa10.3□□□□□ -0.76
SKP1-213ENST00000524288 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
SKP1-213ENST00000524288 NEURL1BA8MQ27 555 aa10.29□□□□□ -0.76
SKP1-213ENST00000524288 HCN2Q9UL51 889 aa10.29□□□□□ -0.76
SKP1-213ENST00000524288 FAM196BA6NMK8 535 aa10.28□□□□□ -0.76
SKP1-213ENST00000524288 AMPD1P23109 780 aa10.28□□□□□ -0.76
SKP1-213ENST00000524288 SNRPNP63162 240 aaKnown RBP10.28□□□□□ -0.76
SKP1-213ENST00000524288 LRRC69Q6ZNQ3 347 aa10.28□□□□□ -0.76
SKP1-213ENST00000524288 DCAF5Q96JK2 942 aa10.28□□□□□ -0.76
SKP1-213ENST00000524288 RRAGCQ9HB90 399 aa10.28□□□□□ -0.76
SKP1-213ENST00000524288 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
SKP1-213ENST00000524288 NOVA2Q9UNW9 492 aaKnown RBP10.28□□□□□ -0.76
SKP1-213ENST00000524288 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
SKP1-213ENST00000524288 HIF1AQ16665 826 aa10.27□□□□□ -0.77
SKP1-213ENST00000524288 CRTC2Q53ET0 693 aaPredicted RBP10.27□□□□□ -0.77
SKP1-213ENST00000524288 SH3PXD2AQ5TCZ1 1133 aa10.27□□□□□ -0.77
SKP1-213ENST00000524288 TMEM164Q5U3C3 297 aa10.27□□□□□ -0.77
SKP1-213ENST00000524288 USP17L15C9J2P7 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L13C9JLJ4 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L11C9JVI0 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L21D6R901 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L18D6R9N7 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L22D6RA61 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L17D6RBQ6 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L19D6RCP7 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L20D6RJB6 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 BRD1O95696 1058 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 USP17L24Q0WX57 530 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 PTK7Q13308 1070 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 BTBD6Q96KE9 485 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 PHACTR1Q9C0D0 580 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
SKP1-213ENST00000524288 C21orf2O43822 256 aa10.25□□□□□ -0.77
SKP1-213ENST00000524288 C2orf49Q9BVC5 232 aaPredicted RBP10.25□□□□□ -0.77
SKP1-213ENST00000524288 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
SKP1-213ENST00000524288 HOXB4P17483 251 aaPredicted RBP10.24□□□□□ -0.77
SKP1-213ENST00000524288 TMCO4Q5TGY1 634 aa10.24□□□□□ -0.77
SKP1-213ENST00000524288 GPAT2Q6NUI2 795 aa10.24□□□□□ -0.77
SKP1-213ENST00000524288 FCHSD1Q86WN1 690 aa10.24□□□□□ -0.77
SKP1-213ENST00000524288 KLF15Q9UIH9 416 aa10.24□□□□□ -0.77
SKP1-213ENST00000524288 GNB5O14775 395 aa10.23□□□□□ -0.77
SKP1-213ENST00000524288 DGKGP49619 791 aa10.23□□□□□ -0.77
SKP1-213ENST00000524288 KCNA1Q09470 495 aa10.23□□□□□ -0.77
SKP1-213ENST00000524288 DPYDQ12882 1025 aa10.23□□□□□ -0.77
SKP1-213ENST00000524288 ANKMY2Q8IV38 441 aa10.23□□□□□ -0.77
SKP1-213ENST00000524288 SCG3Q8WXD2 468 aaKnown RBP10.23□□□□□ -0.77
SKP1-213ENST00000524288 HCN4Q9Y3Q4 1203 aa10.23□□□□□ -0.77
SKP1-213ENST00000524288 IVNS1ABPQ9Y6Y0 642 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms